| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 645,074 | T→C | 5.1% | intergenic (‑71/+43) | rna ← / ← citT | ribonuclease I/citrate/succinate antiporter; citrate carrier |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 645,074 | 0 | T | C | 5.1% | 517.8 / 12.5 | 157 | intergenic (‑71/+43) | rna/citT | ribonuclease I/citrate/succinate antiporter; citrate carrier |
| Reads supporting (aligned to +/- strand): ref base T (69/79); new base C (6/2); total (76/81) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.55e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.19e-01 | |||||||||||
Only 100 of 158 total aligned reads displayed.
GCAACGCTAAGGCGTTGGCAGAAGAGAAGGGAAGCAGAGAAACCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCACCCCGAAGATTGCGCCAAGACGCCAGTAATCTTTTGATTTCACAT > NC_000913/644925‑645220 | cGCTAAGGCGTTGGCAGAAGAGAAGGGAAGCAGAGAAACCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCt < 1:303780/150‑1 (MQ=255) aaGGCGTTGGCAGAAGAGAAGGGAAGCAGAGAAACCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTggcg > 2:1558988/1‑150 (MQ=255) aaGGCGTTGGCAGAAGAGAAGGGAAGCAGAGAAACCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTggcg > 2:2275173/1‑150 (MQ=255) aaGGCGTTGGCAGAAGAGAAGGGAAGCAGAGAAACCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTggcg < 2:6273/150‑1 (MQ=255) aaGGCGTTGGCAGAAGAGAAGGGAAGCAGAGAAACCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTAAGCCCACCTggcg < 2:929871/150‑1 (MQ=255) aaGGCGTTGGCAGAAGAGAAGGGAAGCAGAGAAACCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTAAGCCCACCTggcg < 2:392807/150‑1 (MQ=255) gCGTTGGCAGAAGAGAAGGGAAGCAGAGAAACCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTggcgggc > 2:1801406/1‑150 (MQ=255) gTTGGCAGAAGAGAAGGGAAGCAGAGAAACCGCGAGCATCGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACTCTGAATACTATCAATTAAATCATAAAATAGCCCGCCAGGTGGGCTTACGTGGGGGGC‑‑‑Gt < 1:1444714/150‑1 (MQ=255) ttGGCAGAAGAGAAGGGAAGCAGAGAAACCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑Gtg > 1:79648/1‑150 (MQ=255) ggCAGAAGAGAAGGGAAGCAGAGAAACCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑Gtgat > 2:1661994/1‑150 (MQ=255) gCAGAAGAGAAGGGAAGCAGAGAAAACGCTAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATAAAAACATAAAAAAGCCCGCCAGGTGGGCTTACATGTCGGCC‑‑‑Gtgatg > 2:1127759/1‑150 (MQ=255) cAGAAGAGAAGGGAAGCAGAGAAACCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑Gtgatga > 1:1091289/1‑150 (MQ=255) agacgagaagGGAAGCAGAGAAGCCGCGAGCAACGCGGCGTTACGCCAGACTGCATTCATAATGGGTGTGGACCTCATACCAACACAGAATCCGCTCGATTAACTCCTCAAAAAGCCCGCCCCGTGGGCTGACCTGGCGGGC‑‑‑GTgatgat > 2:1539447/1‑150 (MQ=255) agaagagaagGGAAGCAGAGAAACCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTgatgat > 1:2100210/1‑150 (MQ=255) gaagagaagGGAAGCAGAGAAACCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGAtt > 2:840342/1‑150 (MQ=255) gaagagaagGGAAGCAGAGAAACCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGAtt > 2:866295/1‑150 (MQ=255) cAGAGAAACCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTgg < 1:203743/150‑1 (MQ=255) agagAAACCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGc > 1:1297185/1‑150 (MQ=255) agaAACCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGa > 1:2395543/1‑150 (MQ=255) agaAACCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGa > 1:2089430/1‑150 (MQ=255) aaaCCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAAc < 2:180839/150‑1 (MQ=255) aaaCCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAAc < 2:1813035/150‑1 (MQ=255) aaaCCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAAc < 2:1813317/150‑1 (MQ=255) aaaCCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAAc < 2:2337557/150‑1 (MQ=255) aCCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGt > 1:1471356/1‑150 (MQ=255) aCCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGt > 1:1158840/1‑150 (MQ=255) aCCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGt > 1:1070047/1‑150 (MQ=255) gcgAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGACCGTAtt > 2:1526577/1‑150 (MQ=255) gcgAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTagt > 2:1687662/1‑148 (MQ=255) gcgAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTAtt > 2:1469099/1‑150 (MQ=255) gcgAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTAtt > 2:562626/1‑150 (MQ=255) gcgAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTAtt > 2:798380/1‑150 (MQ=255) gcgAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGCGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTAtt > 2:888237/1‑150 (MQ=255) cgAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTa < 1:1746945/150‑1 (MQ=255) cgTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGc < 1:1032022/150‑1 (MQ=255) ttACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCga < 1:996108/150‑1 (MQ=255) ttACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCga < 1:61972/150‑1 (MQ=255) cGCCAGAATGCTTTCATACTGGGTGTGGAACACATACATACACTGAATACTATCTAATAAATCCTAAAACAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGaa < 1:1059763/150‑1 (MQ=255) cGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGaa < 1:1227847/150‑1 (MQ=255) gAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGgc < 1:1125145/150‑1 (MQ=255) aTGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGgcca < 1:89297/150‑1 (MQ=255) tttCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGgccagcca > 1:2157589/1‑150 (MQ=255) tttCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGgccagcca > 2:631051/1‑150 (MQ=255) tttCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGgccagcca > 1:1845953/1‑150 (MQ=255) ttCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGccaa > 1:1004997/1‑150 (MQ=255) ttCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGccaa > 2:1729177/1‑150 (MQ=255) ttCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGccaa > 1:181570/1‑150 (MQ=255) tAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGccaaccaa > 2:792262/1‑150 (MQ=255) gAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATag > 1:567606/1‑150 (MQ=255) gAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATag > 1:567413/1‑150 (MQ=255) aaCTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCCGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATaga < 1:1126682/150‑1 (MQ=255) aaCTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATaga < 2:2228879/150‑1 (MQ=255) aaCTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATaga < 1:1073567/150‑1 (MQ=255) aaCTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATaga < 2:41788/150‑1 (MQ=255) aaCTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATaga < 1:1975114/150‑1 (MQ=255) tCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGAt > 1:549586/1‑150 (MQ=255) atacatacACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGt > 1:152314/1‑150 (MQ=255) atacatacACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGt > 1:152296/1‑150 (MQ=255) acatacaCTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTaa < 1:2355571/150‑1 (MQ=255) tacaCTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATc > 1:541481/1‑150 (MQ=255) acacTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCa > 1:1801814/1‑150 (MQ=255) acacTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCa < 1:2275173/150‑1 (MQ=255) acacTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCa < 1:1558988/150‑1 (MQ=255) tGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCAcccc > 1:1756948/1‑150 (MQ=255) tGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCAcccc > 1:1059013/1‑150 (MQ=255) tGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCAcccc > 2:1701488/1‑150 (MQ=255) tGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCAcccc > 2:1541775/1‑150 (MQ=255) tatctatTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCACCCCGAAGAtt < 1:1325225/150‑1 (MQ=255) tatctatTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCACCCCGAAGAtt < 1:1371381/150‑1 (MQ=255) ctatTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCACCCCGAAGATTgcg < 1:747820/150‑1 (MQ=255) ctatTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCACCCCGAAGATTgcg < 1:1646059/150‑1 (MQ=255) ctagTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCACCCCGAAGATTgct < 2:2252568/150‑2 (MQ=255) tAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCACCATAGAGATGTAAATCACCCCGAAGATTGCGCCAAGACGCCa > 1:1517617/1‑150 (MQ=255) tAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCACCCCGAAGATTGCGCCAAGACGCCa < 2:152314/150‑1 (MQ=255) tAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCACCCCGAAGATTGCGCCAAGACGCCa > 1:1517658/1‑150 (MQ=255) tAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCACCCCGAAGATTGCGCCAAGACGCCa < 2:152296/150‑1 (MQ=255) aaaaaGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGACTCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCACCCCGAAGATTGCGCCAAGACGCCAGt > 1:294318/1‑150 (MQ=255) aaaaaGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCACCCCGAAGATTGCGCCAAGACGCCAGt > 2:1031915/1‑150 (MQ=255) aaaaaGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCACCCCGAAGATTGCGCCAAGACGCCAGt > 2:2394938/1‑150 (MQ=255) aaaaGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCACCCCGAAGATTGCGCCAAGACGCCAGTa < 2:732189/150‑1 (MQ=255) cgCCCGCCAGGTAAGCCCACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCACCCCGAAGATTGCGCCAAGACGCCAGTAATc > 1:1554532/2‑150 (MQ=255) cgCCCGCCAGGTAAGCCCACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCACCCCGAAGATTGCGCCAAGACGCCAGTAATc > 1:1315784/2‑150 (MQ=255) cccGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCACCCCGAAGATTGCGCCAAGACGCCAGTAATCtt < 1:2074692/150‑1 (MQ=255) cccGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCACCCCGAAGATTGCGCCAAGACGCCAGTAATCtt < 1:1488117/150‑1 (MQ=255) cccGCCAGGTGGGCTTACCGGGCGGGC‑‑‑GTGCTGATTTATTCCGCGTTTGGCGCACGTATTAGGTCCACATGGCGAGAATCGGCCAGCCACCCAACAGCAACATAGAGATGTAAATCACCCCGAAGATTGCGCCAAGACGCCAGTAATCtt < 2:2079090/150‑1 (MQ=255) ccGCCAGGTAAGCCCACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGACTCGGCCAGCCACCCAACAGCACCATCGAGATGTAAATCACCCCGAAGATTGCGCCAAGACGCCAGTAATCttt > 2:1031249/1‑150 (MQ=255) ccGCCAGGTAAGCCCACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCACCCCGAAGATTGCGCCAAGACGCCAGTAATCttt > 2:1386378/1‑150 (MQ=255) cAGGTTGGCTTACCTGGCGGGCTTTTTTATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCACCCCGAAGATTGCGCCAAGACGCCAGTAATCtttt < 2:1671060/150‑1 (MQ=255) cAGGTGGGCTTACCTGGCGGGCTTTTTTATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCACCCCGAAGATTGCGCCAAGACGCCAGTAATCtttt < 2:1275300/150‑1 (MQ=255) tgTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCCGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACCTCGAGATGTAACTCTCCCCGAAGATTGCGCCAAGACGCCAGTAATCTTTTGAttt < 2:596522/149‑1 (MQ=255) ggTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCACCCCGAAGATTGCGCCAAGACGCCAGTAATCTTTTGAttt < 1:742526/150‑1 (MQ=255) ggTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCACCCCGAAGATTGCGCCAAGACGCCAGTAATCTTTTGAttt < 1:995738/150‑1 (MQ=255) ggTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCACCCCGAAGATTGCGCCAAGACGCCAGTAATCTTTTGAttt < 1:1605280/150‑1 (MQ=255) gTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCACCCCGAAGATTGCGCCAAGACGCCAGTAATCTTTTGATTTc < 2:1471356/150‑1 (MQ=255) gTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCACCCCGAAGATTGCGCCAAGACGCCAGTAATCTTTTGATTTc < 2:1158737/150‑1 (MQ=255) gTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGACGAGAATCGGCCAGCCAACCAACAGCACCATAGAGATGTAAATCACCCCGAAGATTGCGCCAAGACGCCAGTAATCTTTTGATTTc < 2:1070047/150‑1 (MQ=255) tGGGCTTACCTGGCGGGC‑‑‑GTGTGGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACGAACAGCAACATAGAGATGTAAATCACCCCGAAGATTGCGCCAAGACGCCAGTAATCTTTTGAtttga < 2:668112/150‑3 (MQ=255) tGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCACCCCGAAGATTGCGCCAAGACGCCAGTAATCTTTTGATTTca < 2:390733/150‑1 (MQ=255) ggCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCACCCCGAAGATTGCGCCAAGACGCCAGTAATCTTTTGATTTcaca < 1:960566/150‑1 (MQ=255) gCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCACCCCGAAGATTGCGCCAAGACGCCAGTAATCTTTTGATTTCACAt < 2:2100137/150‑1 (MQ=255) | GCAACGCTAAGGCGTTGGCAGAAGAGAAGGGAAGCAGAGAAACCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGC‑‑‑GTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCACCCCGAAGATTGCGCCAAGACGCCAGTAATCTTTTGATTTCACAT > NC_000913/644925‑645220 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |