| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 198033 = | 93 (0.940) | 6 (0.060) | 6/260 | NT | 6.5% | coding (106/2433 nt) | bamA | BamABCDE complex OM biogenesis outer membrane pore‑forming assembly factor |
| ? | NC_000913 | 198087 = | 87 (0.940) | coding (160/2433 nt) | bamA | BamABCDE complex OM biogenesis outer membrane pore‑forming assembly factor | |||||
ACCTGAACCAGAAGGGTATCACCATCACGAAGGACGCGAACATCCTCAAAGTTGCCGGTAGCAAACAGAGCGCGAATGGTATTACTGATATCTTCATCATTAACCGTGTCGCCTGTGCGCACCGGCATACTGAGGAGGGCCGCACCAACGGCGACACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/198190‑198033‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgacacgGTTAATGATGAAGATATCAGTAATACCATTCGCGCTCTGTTTGCTACCGGCAACTTTGAGGATGTTCGCGTCCTTCGTGATGGTGATACCCTTCTGGTTCAGGTAAAAGAACGTCCGACCATTGCCAGCATTACTTTCTCCGGTAAC > NC_000913/198087‑198233 ACCTGAACCAGAAGGGTATCACCATCACGAAGGACGCGAACATCCTCAAAGTTGCCGGTAGCAAACAGAGCGCGAATGGTATTACTGATATCTTCATCATTAACCGTGTCGCCTGTGCGCACCGGCATACTGAGGAGGGCCGCACCAACG > 1:244657/1‑150ACCTGAACCAGAAGGGTATCACCATCACGAAGGACGCGAACATCCTCAAAGTTGCCGGTAGCAAACAGAGCGCGAATGGTATTACTGATATCTTCATCATTAACCGTGTCGCCTGTGCGCACCGGCATACTGAGGAGGGCCGCACCAACG > 1:658366/1‑150ACCTGAACCAGAAGGGTATCACCATCACGAAGGACGCGAACATCCTCAAAGTTGCCGGTAGCAAACAGAGCGCGAATGGTATTACTGATATCTTCATCATTAACCGTGTCGCCTGTGCGCACCGGCATACTGAGGAGGGCCGCACCAACG > 2:1071088/1‑150ACCTGAACCAGAAGGGTATCACCATCACGAAGGACGCGAACATCCTCAAAGTTGCCGGTAGCAAACAGAGCGCGAATGGTATTACTGATATCTTCATCATTAACCGTGTCGCCTGTGCGCACCGGCATACTGAGGAGGGCCGCACCAACG > 2:1101471/1‑150ACCTGAACCAGAAGGGTATCACCATCACGAAGGACGCGAACATCCTCAAAGTTGCCGGTAGCAAACAGAGCGCGAATGGTATTACTGATATCTTCATCATTAACCGTGTCGCCTGTGCGCACCGGCATACTGAGGAGGGCCGCACCAACG > 2:1159412/1‑150 CCTGAACCAGAAGGGTATCACCATCACGAAGGACGCGAACATCCTCAAAGTTGCCGGTAGCAAACAGAGCGCGAATGGTATTACTGATATCTTCATCATTAACCGTGTCGCCTGTGCGCACCGGCATACTGAGGAGGGCCGCACCAACGG > 2:117109/1‑150 CTGAACCAGAAGGGTATCACCATCACGAAGGACGCGAACATCCTCAAAGTTGCCGGTAGCAAACAGAGCGTGAATGGTATTACTGATATCTTCATCATTAACCGTGTCGCCTGTGCGCACCGGCATACTGAGGAGGGCCGCACCAACGGC > 2:625473/1‑150 AACCAGAAGGGTATCACCATCACGAAGGACGCGAACATCCTCAAAGTTGCCGGTAGCAAACAGAGCGCGAATGGTATTACTGATATCTTCATCATTAACCGTGTCGCCTGTGCGCACCGGCATACTGAGGAGGGCCGCACCAACGGCGAC > 2:1234869/1‑150 ACCAGAAGGGTATCACCATCACGAAGGACGCGAACATCCTCAAAGTTGCCGGTAGCAAACAGAGCGCGAATGGTATTACTGATATCTTCATCATTAACCGTGTCGCCTGTGCGCACCGGCATACTGAGGAGGGCCGCACCAACGGCGACA < 1:1408069/150‑1 CCAGAAGGGTATCACCATCACGAAGGACGCGAACCTCCTCAAAGTTGCCGGTAGCAAACAGAGCGCGAATGGTATTACTGATATCTTCATCATTAACCGTGTCGCCTGTGCGCACCGGCATACTGAGGAGGGCCGCACCAACGGCGACAC < 1:323592/150‑1 ATTACTGATATCTTCATCATTAACCGTGTCGCCTGTGCGCACCGGCATACTGAGGAGGGCCGCACCAACGGCGACACGGTTAATGATGAAGATATCAGTAATACCATTCGCGCTCTGTTTGCTACCGGCAACTTTGAGGATGTTCGCGTC > 2:719059/1‑150 CATCATTAACCGTGTCGCCTGTGCGCACCGGCATACTGAGGAGGGCCGCACCAACGGCGACACGGTTAATGATGAAGATATCAGTAATACCATTCGCGCTCTGTTTGCTACCGGCAACTTTGAGGATGTTCGCGTCCTTCGTGATGGTGt > 2:1629271/1‑149 ACCGTGTCGCCTGTGCGCATCGGCATACTGAGGAGGGCCGCACCAACGGCGACACGGTTAATGATGAAGATATCAGTAATACCATTCGCGCTCTGTTTGCTACCGGCAACTTTGAGGATGTTCGCGT < 2:1169204/127‑1 ACCGTGTCGCCTGTGCGCATCGGCATACTGAGGAGGGCCGCACCAACGGCGACACGGTTAATGATGAAGATATCAGTAATACCATTCGCGCTCTGTTTGCTACCGGCAACTTTGAGGATGTTCGCGT > 1:1169204/1‑127 CCGTGTCGCCTGTGCGCACCGGCATACTGAGGAGGGCCGCACCAACGGCGACACGGTTAATGATGAAGATATCAGTAATACCATTCGCGCTCTGTTTGCTACCGGCAACTTTGAGGATGTTCGCGTCCTTCGTGATGGTGATACCCTTCT > 2:1615410/1‑150 CGTGTCGCCTGTGCGCACCGGCATACTGAGGAGGGCCGCACCAACGGAGACACGGTTAATGATTAAGATTTCAGTAATACGATTCGCGCTCTGTTTGATACCGGCAACTTTGAGGATGGTCGAGTCCGTCGTGATTGTGCTACCCTTCTG > 2:131186/1‑150 GGCGACACGGTTAATGATGAAGATATCAGTAATACCATTCGCGCTCTGTTTGCTACCGGCAACTTTGAGGATGTTCGCGTCCTTCGTGATGGTGATACCCTTCTGGTTCAGGTAAAAGAACGTCCGACCATTGCCAGCATTACTTTCTCC < 2:36586/150‑1 GGCGACACGGTTAATGATGAAGATATCAGTAATACCATTCGCGCTCTGTTTGCTACCGGCAACTTTGAGGATGTTCGCGTCCTTCGTGATGGTGATACCCTTCTGGTTCAGGTAAAAGAACGTCCGACCATTGCCAGCATTACTTTCTCC > 2:658472/1‑150 ACACGGTTAATGATGAAGATATCAGTAATACCATTCGCGCTCTGTTTGCTACCGGCAACTTTGAGGATGTTCGCGTCCTTCGTGATGGTGATACCCTTCTGGTTCAGGTAAAAGAACGTCCGACCATTGCCAGCATTACTTTCTCCGGTA < 2:613026/150‑1 CACGGTTAATGATGAAGATATCAGTAATACCATTCGCGCTCTGTTTGCTACCGGCAACTTTGAGGATGTTCGCGTCCTTCGTGATGGTGATACCCTTCTGGTTCAGGTAAAAGAACGTCCGACCATTGCCAGCATTACTTTCTCCGGTAA > 2:915040/1‑150 ACGGTTAATGATGAAGATATCAGTAATACCATTCGCGCTCTGTTTGCTACCGGCAACTTTGAGGATGTTCGCGTCCTTCGTGATGGTGATACCCTTCTGGTTCAGGTAAAAGAACGTCCGACCATTGCCAGCATTACTTTCTCCGGTAAC < 2:1391237/150‑1 ACGGTTAATGATGAAGATATCAGTAATACCATTCGCGCTCTGTTTGCTACCGGCAACTTTGAGGATGTTCGCGTCCTTCGTGATGGTGATACCCTTCTGGTTCAGGTAAAAGAACGTCCGACCATTGCCAGCATTACTTTCTCCGGTAAC < 2:1249714/150‑1 ACCTGAACCAGAAGGGTATCACCATCACGAAGGACGCGAACATCCTCAAAGTTGCCGGTAGCAAACAGAGCGCGAATGGTATTACTGATATCTTCATCATTAACCGTGTCGCCTGTGCGCACCGGCATACTGAGGAGGGCCGCACCAACGGCGACACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/198190‑198033‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgacacgGTTAATGATGAAGATATCAGTAATACCATTCGCGCTCTGTTTGCTACCGGCAACTTTGAGGATGTTCGCGTCCTTCGTGATGGTGATACCCTTCTGGTTCAGGTAAAAGAACGTCCGACCATTGCCAGCATTACTTTCTCCGGTAAC > NC_000913/198087‑198233 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |