| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 435568 | 100 (1.010) | 6 (0.060) | 5/264 | NT | 5.8% | intergenic (+12/‑66) | nusB/thiL | transcription antitermination protein/thiamine monophosphate kinase |
| ? | NC_000913 | = 435597 | 101 (1.070) | intergenic (+41/‑37) | nusB/thiL | transcription antitermination protein/thiamine monophosphate kinase | |||||
CTAAACGTAGCGATGTGCCATACAAAGTGGCCATTAACGAAGCGATCGAACTGGCGAAATCGTTCGGCGCAGAAGACAGCCATAAGTTCGTCAACGGCGTACTCGATAAAGCAGCACCTGTGATTCGCCCTAACAAAAAGTGATATCCAGGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/435414‑435568‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggccggCGATCATGGAACGGTCTTCCGTGAATCTACCGGCCTGGATATCACTTTTTGTTAGGGCGAATCACAGGTGCTGCTTTATCGAGTACGCCGTTGACGAACTTATGGCTGTCTTCTGCGCCGAACGATTTCGCCAGTTCGATCGCTTCGTT < NC_000913/435597‑435449 CTAAACGTAGCGATGTGCCATACAAAGTGGCCATTAACGAAGCGATCGAACTGGCGAAATCGTTCGGCGCAGAAGACAGCCATAAGTTCGTCAACGGCGTACTCGATAAAGCAGCACCTGTGATTCGCCCTAACAAAAAGTGATATCCAG < 1:501649/150‑1CTAAACGTAGCGATGTGCCATACAAAGTGGCCATTAACGAAGCGATCGAACTGGCGAAATCGTTCGGCGCAGAAGACAGCCATAAGTTCGTCAACGGCGTACTCGATAAAGCAGCACCTGTGATTCGCCCTAACAAAAAGTGATATCCAG < 1:565614/150‑1 TAAACGTAGCGATGTGCCATACAAAGTGGCCATTAACGAAGCGATCGAACTGGCGAAATCGTTCGGCGCAGAAGACAGCCATAAGTTCGTCAACGGCGTACTCGATAAAGCAGCACCTGTGATTCGCCCTAACAAAAAGTGATATCCAGG < 1:999519/150‑1 AAACGTAGCGATGTGCCATACAAAGTGGCCATTAACGAAGCGATCGAACTGGCGAACTCGTTCGGCGCAGAAGAGAGCCATAAGTTCGTCAACGGCGTACTCGATAAAGCAGCACCTGTGATTCGCCCTAACAAAACGTGATATCCAGGC > 1:264864/1‑150 ACGTAGCGATGTGCCATACAAAGTGGCCATTAACGAAGCGATCGAACTGGCGAAATCGTTCGGCGCAGAAGACAGCCATAAGTTCGACAACGGCGTACTCGATAAAGCAGCACCTGTGATTCGCCCTAACAAAAAGTGATATCCAGGCCG < 2:1382815/150‑1 CGTAGCGATGTGCCATACAAAGTGGCCATTAACGAAGCGATCGAACTGGCGAAATCGTTCGGCGCAGAAGACAGCCATAAGTTCGTCAACGGCGTACTCGATAAAGCAGCACCTGTGATTCGCCCTAACAAAAAGTGATATCCAGGCCGG > 2:970722/1‑150 CGTAGCGATGTGCCATACAAAGTGGCCATTAACGAAGCGATCGAACTGGCGAAATCGTTCGGCGCAGAAGACAGCCATAAGTTCGTCAACGGCGTACTCGATAAAGCAGCACCTGTGATTCGCCCTAACAAAAAGTGATATCCAGGCCGG > 2:963518/1‑150 GAAGCGATCGAACTGGCGAAATCGTTCGGCGCAGAAGACAGCCATAAGTTCGTCAACGGCGTACTCGATAAAGCAGCACCTGTGATTCGCCCTAACAAAAAGTGATATCCAGGCCGGCGATCATGGAACGGTCTTCCGTGAATCTACCGG < 2:1164839/150‑1 AAGCGATCGAACTGGCGAAATCGTTCGGCGCAGAAGACAGCCATAAGTTCGTCAACGGCGTACTCGATAAAGCAGCACCTGTGATTCGCCCTAACAAAAAGTGATATCCAGGCCGGCGATCATGGAACGGTCTTCCGTGAATCTACCGGC < 1:22456/150‑1 GCGATCGAACTGGCGAAATCGTTCGGCGCAGAAGACAGCCATAAGTTCGTCAACGGCGTACTCGATAAAGCAGCACCTGTGATTCGCCCTAACAAAAAGTGATATCCAGGCCGGCGATCATGGAACGGGCTTCCGTGAATCTACCGGCCT < 1:1008483/150‑1 CGATCGATCTGGCGTATTCGTTCGGCGCAGAATACAGCCATAAGTTCGACAACGGCGTACTCGATTAAGCAGCACCTGTGATTCGCCCTAACAAAAAGTGATATCCAGGCCGGCTATCATGGAACGGTCTTCCGTGATTCTACCGGCCTG < 1:647752/150‑1 CGATCGAACTGGCGAAATCGTTCGGCGCAGAAGACAGCCATAAGTTCGTCAACGGCGTACTCGATAAAGCAGCACCTGTGATTCGCCCTAACAAAAAGTGATATCCAGGCCGGCGATCATGGAACGGTCTTCCGTGAATCTACCGGCCTG < 1:786914/150‑1 CGAAATCGTTCGGCGCAGAAGACAGCCATAAGTTCGTCAACGGCGTACTCGATAAAGCAGCACCTGTGATTCGCCCTAACAAAAAGTGATATCAAGGCCGGCGATCATGGAACGGTCTTCCGTGAATCTACCGGCCTGGATATCACTTTT < 1:1614389/150‑1 AGGCCGGCGATCATGGAACGGTCTTCCGTGAATCTACCGGCCTGGATATCACTTTTTGTTAGGGCGAATCACAGGTGCTGCTTTATCGAGTACGCCGTTGACGAACTTATGGCTGTCTTCTGCGCCGAACGATTTCGCCAGTTCGATCGC > 1:1023414/1‑150 GGCCGGCGATCCTGGAACGGTCTTCCGTGCATCTACCGGCCGGGATATCACTTTTTGTTAGGGCGAATCACAGGTGCTGCTTTATCGAGTACGCCGTTGACGAACTTATGGCTGTCTTCTGCGCCGAACGATTTCGCCAGTTCGATCGCT < 2:732572/150‑1 GCCGGCGATCATGGAACGGTCTTCCGTGAATCTACCGGCCTGGATATCACTTTTTGTTAGGGCGAATCACAGGTGCTGCTTTATCGAGTACGCCGTTGACGAACTTATGGCTGTCTTCTGCGCCGAACGATTTCGCCAGTTCGATCGCTT < 1:547178/150‑1 CGGCGATCATGGAACGGTCTTCCGTGAATCTTCCGGTCTGGATATCACTTTTTGTTAGGGCGAATCACAGGTGCTGCTTTATCGAGTACGCCGTTGACGAACTTATGGCTGTCTTCTGCGCCGAACGATTTCGCCAGTTCGATCGCTTCG < 2:929030/150‑1 CGGCGATCATGGAACGGTCTTCCGTGAATCTACCGGCCTGGATATCACTTTTTGTTAGGGCGAATCACAGGTGCTGCTTTATCGAGTACGCCGTTGACGAACTTATGGCTGTCTTCTGCGCCGAACGATTTCGCCAGTTCGATCGCTTCG > 1:1712060/1‑150 GGCGATCATGGAACGGTCTTCCGTGAATCTACCGGCCTGGATATCACTTTTTGTTAGGGCGAATCACAGGTGCTGCTTTATCGAGTACGCCGTTGACGAACTTATGGCTGTCTTCTGCGCCGAACGATTTCGCCAGTTCGATCGCTTCGT > 1:1406260/1‑150 GCGATCATGGAACGGTCTTCCGTGAATCTACCGGCCTGGATATCACTTTTTGTTAGGGCGAATCACAGGTGCTGCTTTATCGAGTACGCCGTTGACGAACTTATGGCTGTCTTCTGCGCCGAACGATTTCGCCAGTTCGATCGCTTCGTT < 1:498363/150‑1 GCGATCATGGAACGGTCTTCCGTGAATCTACCGGCCTGGATATCACTTTTTGTTAGGGCGAATCACAGGTGCTGCTTTATCGAGTACGCCGTTGACGAACTTATGGCTGTCTTCTGCGCCGAACGATTTCGCCAGTTCGATCGCTTCGTT < 1:1187858/150‑1 CTAAACGTAGCGATGTGCCATACAAAGTGGCCATTAACGAAGCGATCGAACTGGCGAAATCGTTCGGCGCAGAAGACAGCCATAAGTTCGTCAACGGCGTACTCGATAAAGCAGCACCTGTGATTCGCCCTAACAAAAAGTGATATCCAGGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/435414‑435568‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggccggCGATCATGGAACGGTCTTCCGTGAATCTACCGGCCTGGATATCACTTTTTGTTAGGGCGAATCACAGGTGCTGCTTTATCGAGTACGCCGTTGACGAACTTATGGCTGTCTTCTGCGCCGAACGATTTCGCCAGTTCGATCGCTTCGTT < NC_000913/435597‑435449 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |