| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3270812 = | 79 (0.800) | 4 (0.040) | 4/260 | NT | 5.2% | coding (959/1146 nt) | garK | glycerate kinase I |
| ? | NC_000913 | 3270907 = | 71 (0.770) | coding (864/1146 nt) | garK | glycerate kinase I | |||||
GTATTGAAATCGTCACTACGGCGCTGAATCTGGAGGAACATATTCACGATTGTACGCTGGTGATCACCGGTGAAGGGCGTATTGACAGCCAGAGTATTCACGGGAAGGTACCGATTGGTGTCGCAAACGTGGCGAAGAAGTACCATAAACCGGTGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3270968‑3270812‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accggtgatCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACCACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCAA > NC_000913/3270907‑3271055 GTATTGAAATCGTCACTACGGCGCTGAATCTGGAGGAACATATTCACGATTGTACGCTGGTGATCACCGGTGAAGGGCGTATTGACAGCCAGAGTATTCACGGGAAGGTACCGATTGGTGTCGCAAACGTGGCGAAGAAGTACCATAAAC > 1:938259/1‑150 TATTGAAATCGTCACTACGGCGCTGAATCTGGAGGAACATATTCACGATTGTACGCTGGTGATCACCGGTGAAGGGCGTATTGACAGCCAGAGTATTCACGGGAAGGTACCGATTGGTGTCGCAAACGTGGCGAAGAAGTACCATAAACC < 2:1307683/150‑1 TATTGAAATCGTCACTACGGCGCTGAATCTGGAGGAACATATTCACGATTGTACGCTGGTGATCACCGGTGAAGGGCGTATTGACAGCCAGAGTATTCACGGGAAGGTACCGATTGGTGTCGCAAACGTGGCGAAGAAGTACCATAAACC < 1:37678/150‑1 TATTGAAATCGTCACTACGGCGCTGAATCTGGAGGAACATATTCACGATTGTACGCTGGTGATCACCGGTGAAGGGCGTATTGACAGCCAGAGTATTCACGGGAAGGTACCGATTGGTGTCGCAAACGTGGCGAAGAAGTACCATAAACC < 1:470211/150‑1 TTGAAATCGTCACTACGGCGCTGAATCTGGAGGAACATATTCACGATTGTACGCTGGTGATCACCGGTGAAGGGCGTATTGACAGCCAGAGTATTCACGGGAAGGTACCGATTGGTGTCGCAAACGTGGCGAAGAAGTACCATAAACCGG > 1:472802/1‑150 TGAAATCGTCACTACGGCGCTGAATCTGGAGGAACATATTCACGATTGTACGCTGGTGATCACCGGTGAAGGGCGTATTGACAGCCAGAGTATTCACGGGAAGGTACCGATTGGTGTCGCAAACGTGGCGAAGAAGTACCATAAACCGGT > 2:1264867/1‑150 GAAATCGTCACTACGGCGCTGAATCTGGAGGAACATATTCACGATTGTACGCTGGTGATCACCGGTGAAGGGCGTATTGACAGCCAGAGTATTCCCGGGAAGGTACCGATTGGTGTCGCAAACGTGGCGAAGAAGTACCATAAACCGGTG > 1:1329251/1‑150 GAAATCGTCACTACGGCGCTGAATCTGGAGGAACATATTCACGATTGTACGCTGGTGATCACCGGTGAAGGGCGTATTGACAGCCAGAGTATTCACGGGAAGGTACCGATTGGTGTCGCAAACGTGGCGAAGAAGTACCATAAACCGGTG > 1:1718058/1‑150 GAAATCGTCACTAAGGAGCTGAATCTGGAGGAACATATTCACGATTGTACGCTGGTGATCACCGGTGAAGGGCGTATTGACAGCCAGAGTATTCACGGGAAGGTACCGATTGGAGTCGCAAACGTGGCGAATAAGTACAATAAACCGGTG > 1:205897/1‑150 AATCGTCACTACGGCGCTGAATCTGGAGGAACATATTCACGATTGTACGCTGGTGATCACCGGTGAAGGGCGTATTGACAGCCAGAGTATTCACGGGAAGGGACCGATTGGTGTCGCAAACGTGGCGAAGAAGTACCATAAACCGGTGAT < 1:62076/150‑1 GTACGCTGGTGATCACCGGTGAAGGGCGTATTGACAGCCAGAGTATTCACGGGAAGGTACCGATTGGTGTCGCAAACGTGGCGAAGAAGTACCATAAACCGGTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATACAGCGCCG > 1:1436037/1‑150 ACGCTGGTGATCACCGGTGAAGGGCGTATTGACAGCCAGAGTATTCACGGGAAGGTTCCGATTGGTGTCGCAAGCGTGGCGAAGAAGTACGATAAACCGGTGATCACCAGCGTACAATCGTGATTATGTTCCTCCAGATTCAGCGCCGTA > 1:281685/1‑150 GCTGGTGATCACCGGTGAAGGGCGTATTGACAGCCAGAGTATTCACGGGAAGGTACCGATTGGTGTCGCAAACGTGGCGAAGAAGTACCATAAACCGGTGATTACCAGCGTACAATCGTGAATATGTTCCTCCAGATTAAGCGCCGTAGT > 1:414177/1‑150 GGGAAGGTACCGATTGGTGTCGCAAACGTGGCGAAGAATTACCATAAACCGGTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACCACTTTTCAGTTCCGCACCAAGAAACGCCATT < 2:281685/150‑1 CCGGTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACCACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTC < 1:938422/150‑1 CCGGTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACCACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTC < 2:1444379/150‑1 CGGTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACCACTTTTCAGTTCCGCACCAAGAAACGCCA‑TAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCAC < 2:312508/150‑1 GTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACCACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACA < 2:378510/150‑1 GATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACCACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATC > 2:1171090/1‑150 TCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACCACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCAA < 1:186022/150‑1 GTATTGAAATCGTCACTACGGCGCTGAATCTGGAGGAACATATTCACGATTGTACGCTGGTGATCACCGGTGAAGGGCGTATTGACAGCCAGAGTATTCACGGGAAGGTACCGATTGGTGTCGCAAACGTGGCGAAGAAGTACCATAAACCGGTGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3270968‑3270812‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accggtgatCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACCACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCAA > NC_000913/3270907‑3271055 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |