| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3677488 | 90 (0.910) | 5 (0.050) | 3/268 | NT | 5.5% | coding (863/2061 nt) | yhjG | putative inner membrane‑anchored periplasmic AsmA family protein |
| ? | NC_000913 | = 3677537 | 85 (0.890) | coding (814/2061 nt) | yhjG | putative inner membrane‑anchored periplasmic AsmA family protein | |||||
CCGTGGATATCGCTATCACCAATTCGCCCATTAAAACCGCGATAATCAAAGACCGACGATTTTTCAGTGTCGATTTTCGCTACCAGCCGACCATCCGTTTCAAACGGC‑GGGGTATCGGGCAGCAGAACGCCCGTCAGTTCATAGAGATCACCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3677335‑3677488‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acccaATGAAGATGGGCGGTGTCGATTTACGGCTTAAATTTTCTGGCGATTCACTGGGTGATCTCTATGAACTGACGGGCGTTCTGCTGCCCGATACCCCGCCGTTTGAAACGGATGGTCGGCTGGTAGCGAAAATCGACACTGAAAAATCGTC < NC_000913/3677537‑3677389 CCGTGGATATCGCTATCACCAATTCGCCCATTAAAACCGCGATAATCAAAGACCGACGATTTTTCAGTGTCGATTTTCGCTACCAGCCGACCATCCGTTTCAAACGGC‑GGGGTATCGGGCAGCAGAACGCCCGTCAGTTCATAGAGATCA < 1:1329974/150‑1 GTGGATATCGCTATCACCAATTCGCCCATTAAAACCGCGATAATCAAAGACCGACGATTTTTCAGTGTCGATTTACGCTACCAGCCGACCATCCGTTTCAAACGGC‑GGGGTATCGGGCAGCAGAACGCCCGTAAGTTCATAGAGATCACC > 1:26185/1‑150 TGGATATCGCTATCACCAATTCGCCCATTAAAACCGCGATAATCAAAGACCGACGATTTTTCAGTGTCGATTTTCGCTACCAGCCGACCATCCGTTTCAAACGGCGGGGGTATCGGGCAGCAGAACGCCCGTCAGTTCATAGAGATCACC < 2:662370/150‑1 TCAGTGTCGTTTTTCGAGACCAGCCGACCATCCGTTTCTAACGGC‑GGGGTATCGGGCAGCAGAACGCCCGTCTGTTCATAGAGATCACCCAATGATGATGGGCGGTGTTGATTTACGGCTTAAATTTTCTGGCGATTCACTGGGTGATCT < 1:107271/150‑1 TTTCGCTACCAGCCGACCATCCGTTTCAAACGGC‑GGGGTATCGGGCAGCAGAACGCCCGTCAGTTCATAGAGATCACCCAATGAAGATGGGCGGTGTCGATTTACGGCTTAAATTTTCTGGCGATTCACTGGGTGATCTC > 1:1242639/1‑140 TTTCGCTACCAGCCGACCATCCGTTTCAAACGGC‑GGGGTATCGGGCAGCAGAACGCCCGTCAGTTCATAGAGATCACCCAATGAAGATGGGCGGTGTCGATTTACGGCTTAAATTTTCTGGCGATTCACTGGGTGATCTC > 1:911902/1‑140 TTTCGCTACCAGCCGACCATCCGTTTCAAACGGC‑GGGGTATCGGGCAGCAGAACGCCCGTCAGTTCATAGAGATCACCCAATGAAGATGGGCGGTGTCGATTTACGGCTTAAATTTTCTGGCGATTCACTGGGTGATCTC < 2:1242639/140‑1 TTTCGCTACCAGCCGACCATCCGTTTCAAACGGC‑GGGGTATCGGGCAGCAGAACGCCCGTCAGTTCATAGAGATCACCCAATGAAGATGGGCGGTGTCGATTTACGGCTTAAATTTTCTGGCGATTCACTGGGTGATCTC < 2:911902/140‑1 ACCCAATGAAGATGGGCGGAGTCGATTTACGGCTTAAATTTTCTGGCGATTCACTGGGTGATCTCTATTAACTGACGGGCGTTCTGCTGCCCGATACCCCGCCGTTTGCAACGGATGGTCGGCTGGTAGCGAAAATCGACACTGAAAAAa > 2:1136602/1‑149 CCCAATGAAGATGGGCGGTGTCGATTTACGGCTTAAATTTTCTGGCGATTCACTGGGTGATCTCTATGAACTGACGGGCGTTCTGCTGCCCGATACCCCGCCGTTTGAAACGGATGGTCGGCTGGTAGCGAAAATCGACACTGAAAAATC > 1:1439808/1‑150 CCAATGAAGATGGGCGGTGTCGATTTACGGCTTAAATTTTATGGCGATTCACTGGGTGATCTCTATGAACTGACGGGCGTTCTGCTGCCCGATACCCCGCCGTTTGAAACGGATGGTCGGCTGGTAGCGAAAATCGACACTGAAAAATCG > 2:656154/1‑150 CAATGAAGATGGGCGGTGTCGATTTACGGCTTAAATTTTCTGGCGATTCACTGGGTGATCTCTATGAACTGACGGGCGTTCTGCTGCCCGATACCCCGCCGTTTGAAACGGATGGTCGGCTGGTAGCGAAAATCGACACTGAAAAATCGT > 2:703686/1‑150 AATGAAGATGGGCGGTGTCGATTTACGGCTTAAATTTTCTGGCGATTCACTGGGTGAGCTCTATGAACTGACGGGCGTTCTGCTGCCCGATACCCCGCCGTTTGAAACGGATGGTCGGCTGGTAGCGAAAATCGACACTGAAAAATCGTC < 2:723070/150‑1 AATGAAGATGGGCGGGGTCGATTTACGGCTTAAATTTTCTGGCGATTCACTGGGTGAGCTCTATGAACTGACGGGCGTTCTGCTGCCCGATACCCCGCCGTTTGAAACGGATGGTCGGCTGGTAGCGAAAATCGACACTGAAAAATCGTC < 2:657354/150‑1 AATGAAGACGTGCGGTTTGGATTTACGTCTTATATTTTCTGGCGCTTCACTGGGTTATCTCTATGAACTGACGGGCGTTCTGCTGCCCGATACCCCGCCGTTTGAAACGGATGGTCGGCTTGTAGCGAAAATCGACACTGAAAAATCGTC < 1:1656974/150‑1 CCGTGGATATCGCTATCACCAATTCGCCCATTAAAACCGCGATAATCAAAGACCGACGATTTTTCAGTGTCGATTTTCGCTACCAGCCGACCATCCGTTTCAAACGGC‑GGGGTATCGGGCAGCAGAACGCCCGTCAGTTCATAGAGATCACCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3677335‑3677488‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acccaATGAAGATGGGCGGTGTCGATTTACGGCTTAAATTTTCTGGCGATTCACTGGGTGATCTCTATGAACTGACGGGCGTTCTGCTGCCCGATACCCCGCCGTTTGAAACGGATGGTCGGCTGGTAGCGAAAATCGACACTGAAAAATCGTC < NC_000913/3677537‑3677389 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |