New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 4375764 | 93 (0.940) | 5 (0.050) | 5/270 | NT | 5.1% | coding (66/567 nt) | efp | polyproline‑specific translation elongation factor EF‑P |
? | NC_000913 | = 4375795 | 97 (1.010) | coding (97/567 nt) | efp | polyproline‑specific translation elongation factor EF‑P |
ACCAATCTTCTCTGGATGGGGTATTTAGGGTTACAATATGCGCCATTTTGTGGCTTAGCTACCAATTAACAAATTTCAGAGGGCCTTATGGCAACGTACTATAGCAACGATTTTCGTGCTGGTCTTAAAATCATGTTAGACGGCGAACCTTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4375612‑4375764 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttacCCGGTTTTACGAATTCACTCGCTTCAACCGCGTAAGGTTCGCCGTCTAACATGATTTTAAGACCAGCACGAAAATCGTTGCTATAGTACGTTGCCATAAGGCCCTCTGAAATTTGTTAATTGGTAGCTAAGCCACAAAATGGCGCATAT < NC_000913/4375795‑4375647 ACCAATCTTCTCTGGATGGGGTATTTAGGGTTACAATATGCGCCATTTTGTGGCTTAGCTACCAATTAACAAATTTCAGAGGGCCTTATGGCAACGTACTATAGCAACGATTTTCGTGCTGGTCTTAAAATCATGTTAGACGGCGAACCT < 2:1454688/150‑1 CCAATCTTCTCTGGATGGGGTATTTAGGGTTACAATATGCGCCATTTTGTGGCTTAGCTACCAATTAACAAATTTCAGATGGCCTTATGGCAACGTACTATAGCAACGATTTTCGTGCTGGTCTTAAAATCATGTTAGACGGCGAACCTT > 1:255937/1‑150 CCAATCTTCTCTGGATGGGGTATTTAGGGTAACAATATGCGCCATTTTGTGGCTTAGCTACCAATTAACAAATTTCAGAGGGCCTTATGGCAACGTACTATAGCAACGATTTTCGTGCTGGTCTTAAAATCATGTTAGACGGAGAACCTT > 1:455455/1‑150 CAATCTTCTCTGGATGGGGTATTTAGGGTTACAATATGCGCCATTTTGTGGCTTAGCTACCAATTAACAAATTTCAGAGGGCCTTATGGCAACTTACTATAGCAACGATTTTCGTGCTGGTCTTAAAATCATGTTAGACGGCGAACCTTA > 2:385062/1‑150 AATCTTCTCTGGATGGGGTATTTAGGGTTACAATATGCGCCATTTTGTGGCTTAGCTACCAATTAACAAATTTCAGAGGGCCTTATGGCAACGTACTATAGCAACGATTTTCGTGCTGGTCTTAAAATCATGTTAGACGGCGAACCTTAC > 1:59408/1‑150 GGATGGGGTATTTAGGGTTACAATATGCGCCATTTTGTGGCTTAGCTACCAATTAACAAATTTCAGAGGGCCTTATGGCAACGTACTATAGCAACGATTTTCGTGCTGGTCTTAAAATCATGTTAGACGGCGAACCTTACCCGGTTTTAC > 1:122511/1‑150 TGCGCCATTTTGTGGCTTAGCTACCAATTAACAAATTTCAGAGGGCCTTATGGCAACGTACTATAGCAACGATTTTCGTGCTGGTCTTAAAATCATGTTAGACGGCGAACCTTACCCGGTTTTACGAATTCACTCGCTTCAACCGCGTAA < 2:768796/150‑1 GCGCCATTTTGTGGCTTAGCTACCAATTAACAAATTTCAGAGGGCCTTATGGCAACGTACTATAGCAACGATTTTCGTGCTGGTCTTAAAATCATGTTAGACGGCGAACCTTACCCGGTTTTACGAATTCACTCGCTTCAACCGCGTAAG < 1:880402/150‑1 CCATTTTGTGGCTTAGCTACCAATTAACAAATTTCAGAGGGCCTTATGGCAACGTACTATAGCAACGATTTTCGTGCTGGTCTTAAAATCATGTTAGACGGCGAACCTTACCCGGTTTTACGAATTCACTCGCTTCAACCGCGTAAGGTT < 2:122511/150‑1 TAGCTACCAATTAACAAATTTCAGAGGGCCTTATGGCAACGTACTATAGCAACGATTTTCGTGCTGGTCTTAAAATCATGTTAGACGGCGAACCTTACCCGGTTTTACGAATTCACTCGCTTCAACCGCGTAAGGTTCGCCGTCTAACAT < 2:823282/150‑1 TTACCCGGTTTTACGAATTCACTCGCTTCAACCGCGTAAGGTTCGCCGTCTAACATGATTTTAAGACCAGCACGAAAATCGTTGCTATAGTACGTTGCCATAAGGCCCTCTGAAATTTGTTAATTGGTAGCTAAGCCACAAAATGGCGCA < 1:1332720/150‑1 TTACCCGGTTTTACGAATTCACTCGCTTCAACCGCGTAAGGTTCGCCGTCTAACATGATTTTAAGACCAGCACGAAAATCGTTGCTATAGTACGTTGCCATAAGGCCCTCTGAAATTTGTTAATTGGTAGCTAAGCCACAAAATGGCGCA < 2:1227785/150‑1 CCCGGTTTTACGAATTCACTCGCTTCAACCGCGTAAGGTTCGCCGTCTAACATGATTTTAAGACCAGCACGAAAATCGTTGCTATAGTACGTTGCCATAAGGCCCTCTGAAATTTGTTAATTGGTAGCTAAGCCACAAAATGGCGCATAT < 1:581941/150‑1 CCCGGTTTTACGAATTCACTCGCTTCAACCGCGTAAGGTTCGCCGTCTAACATGATTTTAAGACCAGCACGAAAATCGTTGCTATAGTACGTTGCCATAAGGCCCTCTGAAATTTGTTAATTGGTAGCTAAGCCACAAAATGGCGCATAT > 2:1192816/1‑150 ACCAATCTTCTCTGGATGGGGTATTTAGGGTTACAATATGCGCCATTTTGTGGCTTAGCTACCAATTAACAAATTTCAGAGGGCCTTATGGCAACGTACTATAGCAACGATTTTCGTGCTGGTCTTAAAATCATGTTAGACGGCGAACCTTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4375612‑4375764 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttacCCGGTTTTACGAATTCACTCGCTTCAACCGCGTAAGGTTCGCCGTCTAACATGATTTTAAGACCAGCACGAAAATCGTTGCTATAGTACGTTGCCATAAGGCCCTCTGAAATTTGTTAATTGGTAGCTAAGCCACAAAATGGCGCATAT < NC_000913/4375795‑4375647 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |