Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 2,653,372 T→C 6.1% intergenic (+33/‑483) sseA → / → ryfA 3‑mercaptopyruvate sulfurtransferase/novel sRNA, function unknown

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,653,3720TC 6.1% 292.7 / 6.7 99intergenic (+33/‑483)sseA/ryfA3‑mercaptopyruvate sulfurtransferase/novel sRNA, function unknown
Reads supporting (aligned to +/- strand):  ref base T (43/49);  new base C (4/2);  total (48/51)
Fisher's exact test for biased strand distribution p-value = 4.23e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

AGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCAAAAGAGAGTAATTATTGTTTATTTAGCG  >  NC_000913/2653225‑2653521
                                                                                                                                                   |                                                                                                                                                     
aGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTgg                                                                                                                                                     <  2:368423/150‑1 (MQ=255)
 gCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGACAAACTGTACGACGGCGCATGGAGTGAATCGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAATTAAGAATTTTAAACTCAATAAAAAACCGCCGAATTTGGc                                                                                                                                                    >  1:1669367/1‑150 (MQ=255)
  ccGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGTAGGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACCGGCAATAAAAAACCGCCGAATTAGGCg                                                                                                                                                   >  1:1222593/1‑150 (MQ=255)
  ccGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCAAATTCGGCg                                                                                                                                                   >  2:780429/1‑150 (MQ=255)
   cGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCgg                                                                                                                                                  <  2:1619085/150‑1 (MQ=255)
    gTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGt                                                                                                                                                 >  2:716423/1‑150 (MQ=255)
        ttttGTTAGCACTCGCGTCGCTGGTTTTGCCAATCTTGTATCTGTTCGACGGCGCATGTAGTGAATGGGGCTCGCGGGCTGTTTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCTATAAAAAACCGGCGAATTTGGCGGttttt                                                                                                                                             <  2:475791/150‑1 (MQ=255)
         tttGTTCGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGTGCGCGCGGGCAGATTTACCGGTTGATCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCAAATTCGGCGGtttttt                                                                                                                                            <  1:827679/150‑1 (MQ=255)
         tttGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGtttttt                                                                                                                                            <  1:370399/150‑1 (MQ=255)
           tGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTAt                                                                                                                                          <  2:515184/150‑1 (MQ=255)
             ttAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGTACGACGGCGCATTGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTg                                                                                                                                        <  2:1300402/150‑1 (MQ=255)
             taaGCACTCGCGACGCTGGATGTGCCAATCGTGAAACTGTTCGTCTGAGCTTGGTGTGAATGGGGCGCGCGGGCTGATTTACCGGTTGTGCCAGTGTAATAAGTATTTTACAGGCAATAATAATCCGCCGAATTTGGCGGTTTTTTATTg                                                                                                                                        <  2:1669367/148‑1 (MQ=255)
               aGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCt                                                                                                                                      <  2:672336/150‑1 (MQ=255)
               aGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCAAATTCGGCGGTTTTTTATTGcc                                                                                                                                      <  1:780429/150‑2 (MQ=255)
               aGCACTCGCGACGCTGGATGCGCCAAACGTGACACGGTACGACGGCGCATGGAGTGAATGGGCCGCGCGGGCAGATGTACCGGTGGAGCCAGTGAAATAAGTATTTTACAGGCAATAAACAACCGCCGAATTTGGCGGTTTTTTATTGCt                                                                                                                                      <  1:1514967/150‑1 (MQ=255)
                   cTCGCGACGCTGGATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTc                                                                                                                                  >  1:23992/1‑150 (MQ=255)
                     cgcgACGCTGGATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTg                                                                                                                                <  1:1685339/150‑1 (MQ=255)
                       cgACGCTGGATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGt                                                                                                                              >  2:1433401/1‑150 (MQ=255)
                              ggATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGc                                                                                                                       >  2:36563/1‑150 (MQ=255)
                               gttgtgCCAATCGTGAACCTGGACGACGGCGCATGGAGGGAATGGGGCGCGCTGGCAGATTTACCTGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGcc                                                                                                                      <  2:947402/148‑1 (MQ=255)
                                ttgttCCAAACGGGAAACTGTACGACGGCGCCTGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTTTTTTACAGGCAATCAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCt                                                                                                                     <  2:121757/149‑1 (MQ=255)
                                     ccAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCca                                                                                                                >  2:838087/1‑150 (MQ=255)
                                      cAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCcag                                                                                                               >  1:192860/1‑150 (MQ=255)
                                      cAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCcag                                                                                                               >  2:720294/1‑150 (MQ=255)
                                         aCGTGACACTGTACGACGGCGCATGGAGTTCATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAAGTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCcagcag                                                                                                            <  2:1341044/150‑1 (MQ=255)
                                           gTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGt                                                                                                          <  1:595277/150‑1 (MQ=255)
                                           gTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGt                                                                                                          <  1:594709/150‑1 (MQ=255)
                                             gAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTg                                                                                                        <  2:1494243/150‑1 (MQ=255)
                                              aaaCTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTATTTTATTGCTAGTCTGGTTCGCGGCCTATCCAGCAGGttca                                                                                                       >  2:1453444/1‑148 (MQ=255)
                                                 cTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACtt                                                                                                    >  2:1169889/1‑150 (MQ=255)
                                                   gTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTtgt                                                                                                  <  2:1622909/150‑1 (MQ=255)
                                                   gTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTtgt                                                                                                  >  1:1136497/1‑150 (MQ=255)
                                                   gTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTtgt                                                                                                  >  2:1541922/1‑150 (MQ=255)
                                                   gTACGACGGCGCATGGAGTGAATGGGGCGAGCGGGCAGATTTACCGGTTGAGACAGTGAAATAAGTATTTTACAGGCAATAAAAAAACGCCGAATTTGGCGGTTTTTTATTTCTAGTCTTGTTCGAGGCCTTTCCAGCAGGTTGACTtgt                                                                                                  >  2:825184/1‑150 (MQ=255)
                                                     tagacgGCGGATGGAGTGTATGGGTCTCGCGTTAAGATTTAACGGTTGAGCAATTGAAATAAGTATTTTACAGTCAATAAAAAACCGCCGATTTTGGGGGTTTTTTATTGATAGTTTGGTTGGCGGCCTTTCCAGCAGGTTGACTTgtgt                                                                                                <  2:144813/148‑1 (MQ=255)
                                                       gacgGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTa                                                                                              <  1:1541834/150‑1 (MQ=255)
                                                         cgGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACa                                                                                            <  2:763579/150‑1 (MQ=255)
                                                          ggCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACAt                                                                                           <  1:534967/150‑1 (MQ=255)
                                                            cgcATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGa                                                                                         <  1:962668/150‑1 (MQ=255)
                                                              cATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGc                                                                                       >  2:71836/1‑150 (MQ=255)
                                                                  gAGTGAATGGGGCGCGCGGGCAGATTTACCGATTCAGCCTGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTCTTGCTAGTCTGGTTCGCGGCCTGTCCAGCAGGAGGACTTGTGTAACATGAGCAACg                                                                                   >  1:260220/1‑150 (MQ=255)
                                                                   aGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGc                                                                                  <  1:1272649/150‑1 (MQ=255)
                                                                      gAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGCAgg                                                                               >  1:1065365/1‑150 (MQ=255)
                                                                      gAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGCAgg                                                                               >  2:160595/1‑150 (MQ=255)
                                                                       aaTGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGCAGGt                                                                              <  1:644462/150‑1 (MQ=255)
                                                                          ggggCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGCAGGTGCt                                                                           <  2:776912/150‑1 (MQ=255)
                                                                          ggggAGCGAGTGCAGATTTACCGGTTTAGCCAGTTAAATAAGTTTTTTACAGGCAATAAATAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGCAGGTGCt                                                                           <  2:843335/150‑1 (MQ=38)
                                                                           gggCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGCAGGTGCtt                                                                          <  1:674117/150‑1 (MQ=255)
                                                                             gcgcgcGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGCAGGTGCTTca                                                                        <  2:599003/150‑1 (MQ=255)
                                                                             gcgcgcGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGCAGGTGCTTca                                                                        <  2:1419294/150‑1 (MQ=255)
                                                                              cgcgcgGGCAGATTTACCGGGTGAGCCAGTGAAATAAGTAATTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGCAGGTGCTTcac                                                                       <  1:1459238/150‑1 (MQ=255)
                                                                               gcgcgGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGCAGGTGCTTcaca                                                                      <  1:838087/150‑1 (MQ=255)
                                                                                  cgGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGCAGGTGCTTCACAGCa                                                                   >  1:606081/1‑150 (MQ=255)
                                                                                   gggCAGATTTACCTGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGCAGGTGCTTCACAGCaa                                                                  <  1:952285/150‑1 (MQ=255)
                                                                                   gcgCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCATTCCACCAGGTTGACTTGTGTTACATGAGCAACGCAGGTGCTTCACAGCaa                                                                  <  1:254272/148‑1 (MQ=255)
                                                                                      cAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGCAGGTGCTTCACAGCAAAAc                                                               <  2:1403772/150‑1 (MQ=255)
                                                                                          tttACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGCAGGTGCTTCACAGCAAAACAATa                                                           >  1:1404361/1‑150 (MQ=255)
                                                                                            tACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGCAGGTGCTTCACAGCAAAACAATACt                                                         >  2:1681190/1‑150 (MQ=255)
                                                                                            tACCGGTTGAGACAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTACTCTGGTTCGCGGCCTTTCCAGCAGGTTGACATGTGTTACATGAGCAACGCAGGTGCTTCACAGCAAAACAATACt                                                         >  2:273223/1‑150 (MQ=255)
                                                                                                ggTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGCAGGTGCTTCACAGCAAAACAATACTCAcc                                                     >  2:514232/1‑150 (MQ=255)
                                                                                                ggTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGCAGGTGCTTCACAGCAAAACAATACTCAcc                                                     <  2:1219589/150‑1 (MQ=255)
                                                                                                ggTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGCAGGTGCTTCACAGCAAAACAATACTCAcc                                                     <  2:192860/150‑1 (MQ=255)
                                                                                                ggTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTCTGTTACATGAGCAACGCAGGTGCTTCACAGCAAAACAATACTCAcc                                                     >  2:161697/1‑150 (MQ=255)
                                                                                                    gAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCTAGGCCTTTCCAGCAGGTTGACTTGTGATACAAGAGCAACGCAGGAGCTTAACAGCAAAACAATACTCACAAGTa                                                 >  1:1104351/1‑150 (MQ=255)
                                                                                                     aGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTaa                                                >  2:442091/1‑150 (MQ=255)
                                                                                                      gCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAAc                                               >  1:1047207/1‑150 (MQ=255)
                                                                                                       ccAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAAct                                              >  2:470395/1‑150 (MQ=255)
                                                                                                       ccAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAAct                                              >  2:1275257/1‑150 (MQ=255)
                                                                                                         aGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAActca                                            >  2:1443968/1‑149 (MQ=255)
                                                                                                            gAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCtt                                         >  1:228626/1‑150 (MQ=255)
                                                                                                              aaTAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCtttt                                       <  2:1583984/150‑1 (MQ=255)
                                                                                                                tAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGCTGACTTGTGTTACATGAGCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCCTTTTg                                     >  1:767801/1‑150 (MQ=255)
                                                                                                                  attATTTTACAGGCAATAAAAAACCGCCGAATTTTGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTc                                   <  2:68646/148‑1 (MQ=255)
                                                                                                                  aGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTc                                   <  2:23992/150‑1 (MQ=255)
                                                                                                                  aGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTc                                   >  1:991646/1‑150 (MQ=255)
                                                                                                                   gTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCa                                  <  1:720294/150‑1 (MQ=255)
                                                                                                                    tATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCATTCAAGCAGGTTGACTTGTGTTACATGAGCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCaa                                 >  1:476489/1‑150 (MQ=255)
                                                                                                                     aTTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGTAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAg                                <  1:487733/150‑1 (MQ=255)
                                                                                                                     aTTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAg                                <  1:20954/150‑1 (MQ=255)
                                                                                                                      ttttACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGc                               <  1:1541922/150‑1 (MQ=255)
                                                                                                                         ttcAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCaaa                            <  1:1054317/148‑1 (MQ=255)
                                                                                                                         tACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTGATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGCCTTGTGTTACATGAGCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCaaa                            >  1:1264758/1‑150 (MQ=255)
                                                                                                                           cAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACTTGAGCAAGGCAGGTGCGTCGCAGCAAAAAAATTCTAAGCAGTATCTATCTTTTTGGCAAGAAAAag                          >  1:172629/1‑150 (MQ=37)
                                                                                                                           cAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCAAAag                          >  2:5826/1‑150 (MQ=255)
                                                                                                                           cAGGCAATAAAAAACCGCCGAAGTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCaaatg                          >  1:71361/1‑148 (MQ=255)
                                                                                                                             ggCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCAAAagag                        >  2:361415/1‑150 (MQ=255)
                                                                                                                             ggCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCAAAagag                        >  2:257901/1‑150 (MQ=255)
                                                                                                                               cAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCAAAagagag                      <  2:1648757/150‑1 (MQ=255)
                                                                                                                               cAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCAAAagagag                      >  1:1372832/1‑150 (MQ=255)
                                                                                                                               cAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCAAAagagag                      <  2:29383/150‑1 (MQ=255)
                                                                                                                                 aTAAAAAACCGCCAAATTCGGCGGTTGTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCAAAAGAGAGtt                    >  1:275705/1‑149 (MQ=255)
                                                                                                                                   aaaaaaCCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCAAAAGAGAGTAat                  >  2:712809/1‑150 (MQ=255)
                                                                                                                                   aaaaaaCCGCCAAATTCGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCAAAAGAGAGTAat                  >  1:1576595/1‑150 (MQ=255)
                                                                                                                                   aaaaaaCCGCAAAATTCGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCATTCCAGCAGGTTGAATTGTGTTACATGAGCAAAGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTATTTTTGTAAATCAAAATAGAGTAat                  >  2:285285/1‑150 (MQ=255)
                                                                                                                                      aaaCCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCAAAAGAGAGTAattat               >  1:1594245/1‑150 (MQ=255)
                                                                                                                                        aCCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCAAAAGAGAGTAATTATTg             <  2:407541/150‑1 (MQ=255)
                                                                                                                                        aCCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGATGACTTGTGTTACATGAGCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCAAAAGAGAGTAATTATTg             >  2:113995/1‑150 (MQ=255)
                                                                                                                                          cgccgAATTTGGCTGTTTTTTATTGCGAGTCTGGTTCGCGGCCTTTCCAGCAGGTTTAATTGTGTTACATTAGCAACTCAGGTGCTTCACAGCAAACCAATACTCACCAGTAAGACTCTTTTTGTCAAGCAAAAGAGAGTAATTATTGtt           <  2:838951/150‑1 (MQ=37)
                                                                                                                                          cgccgAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCAAAAGAGAGTAATTATTGtt           <  1:596033/150‑1 (MQ=255)
                                                                                                                                                   tGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCAAAAGAGAGTAATTATTGTTTATTAAGCg  >  1:1584139/1‑150 (MQ=255)
                                                                                                                                                   |                                                                                                                                                     
AGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTGACTTGTGTTACATGAGCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCAAAAGAGAGTAATTATTGTTTATTTAGCG  >  NC_000913/2653225‑2653521

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑