| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,439,588 | G→C | 9.5% | intergenic (‑79/+28) | yhdN ← / ← rplQ | DUF1992 family protein/50S ribosomal subunit protein L17 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,439,588 | 0 | G | C | 9.5% | 409.3 / 27.2 | 135 | intergenic (‑79/+28) | yhdN/rplQ | DUF1992 family protein/50S ribosomal subunit protein L17 |
| Reads supporting (aligned to +/- strand): ref base G (57/65); new base C (9/4); total (66/69) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.51e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.08e-01 | |||||||||||
Only 100 of 143 total aligned reads displayed.
AGGTTATCAAACTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCGGCACGGCTCG > NC_000913/3439439‑3439737 | aGGTTATCAAACTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACccgccg > 2:1044750/1‑150 (MQ=255)aGGTTATCAAACTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACccgccg > 2:390844/1‑150 (MQ=255) ggTTATCAAACTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCgg > 2:940448/1‑150 (MQ=255) gTTATCAAACTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCggg > 2:423749/1‑150 (MQ=255) gTTATCAAACTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑‑AAA‑AAACCCGCCgggg < 2:1704666/150‑1 (MQ=255) ttATCAAACTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCgggg > 2:1368268/1‑150 (MQ=255) tATCAAACTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGc < 1:717548/150‑1 (MQ=255) tATCAAACTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGc < 1:1276312/150‑1 (MQ=255) tATCAAACTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGc < 1:1578759/150‑1 (MQ=255) tATCAAACTCACCTTTCGCTAGCGCTGCTGCTATATGCCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGc < 2:1055196/150‑1 (MQ=255) aTCAAACTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCg > 2:362293/1‑150 (MQ=255) cAAACTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCggg < 2:1220481/150‑1 (MQ=255) cAAACTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCggg < 2:896025/150‑1 (MQ=255) cAAACTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCAGGGGCggg > 1:1502678/1‑150 (MQ=255) aaaaTTCAGCTTGCGCTTGCGCTTCTGCTATATCGCGCTCGGCCCAGTGGTAAATAAACAACATAAATCCTCCCGGGCTTGACCAAAACGTGTACAGTTATTTTAGTAAAGTGGGTATATTAGGGTTAT‑‑AAAA‑AAACCCGCCGGGGCggg < 2:469433/149‑1 (MQ=255) aaCTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGtt > 1:1015477/1‑150 (MQ=255) aCTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGttt < 1:512545/150‑1 (MQ=255) cACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGtttttt < 1:1359823/150‑1 (MQ=255) cACCTTTCGCTAGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAA‑‑AAAA‑AAACCCGCCGGGGCGGGtttttt < 1:48707/150‑1 (MQ=255) aCCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCCCGGCGGGttttttt < 1:816101/150‑1 (MQ=255) cattCGCGTGCGCTTCTGCTATCTGGCGCTCTGCCCACTGGGCAAGTAACCACATAAATACTCCCGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAA‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTAc < 1:1408071/148‑1 (MQ=255) cTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAACTACTCCAGGGGCTGAACAAAACGATTACAGCTATTGTAGATAAGTGTGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCTGGTTTTTTTAc < 1:1401063/150‑1 (MQ=255) gcgcTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCa < 1:1490042/150‑1 (MQ=255) cTGCTATATGGCGCTCAGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATCAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTAc < 1:604066/150‑1 (MQ=255) cTGATATATGGCGCTCTGCCCACTGGTCAAGGAACCACATAAATACTCCAGGGGATGAACAAAAAGAGGACAGCTATTGTAGATAAGTGGGGATCCGACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGGTGTTGGTCGTTGCTTCAGATGAc > 1:131105/1‑150 (MQ=255) tGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGTGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTAct < 2:195768/150‑1 (MQ=255) tGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACAAAAATAATCCAGGGGATTAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTAct < 2:210282/150‑1 (MQ=255) gCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTActc > 1:541966/1‑150 (MQ=255) gCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTActc > 1:1177504/1‑150 (MQ=255) gCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTAAGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGATTTTTTACGTTGCTTCAGATGActc > 1:1331738/1‑150 (MQ=255) tatGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTgca > 1:1242394/1‑150 (MQ=255) tGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTgcagc > 2:769926/1‑150 (MQ=255) ggCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGTTGAACAAAAAGAGTACAGCTATTGTAGATAAGGGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTgcagca < 1:875364/150‑1 (MQ=255) gcTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTGCAGAGTAATCTgaagcaacg < 1:1044750/150‑4 (MQ=255) cccACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGGTTTTTTACGTTGCGTCAGATTACTCTGCAGCAGCTTCTGCt > 2:1120553/1‑150 (MQ=255) tGGTCAAGTAACCACATAAATACTCCCGGGGATGAACAAAAAGAGTCCAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTtctc < 2:892716/150‑1 (MQ=255) tGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTtctc < 1:736797/150‑1 (MQ=255) ggTCAAGTAACCACATAAATATTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTctct > 1:1102210/1‑150 (MQ=255) ggTCAAGTAACAACATAAATACTCCAGGGGATTAACAAAAATAGTACAGCTATTGTAGATAATTGTGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTctct < 2:270508/150‑1 (MQ=255) gTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTg < 2:1527527/150‑1 (MQ=255) cAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGaa < 1:643742/150‑1 (MQ=255) aGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACg > 1:1144758/1‑150 (MQ=255) aCCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCa < 2:1271916/150‑1 (MQ=255) acaTAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAAcc < 2:1618675/150‑1 (MQ=255) acaTAAATACTCAAGGGGATTAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCTGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAAcc < 2:1316810/150‑1 (MQ=255) caTAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCa > 2:451941/1‑150 (MQ=255) tAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCCGc > 2:159130/1‑150 (MQ=255) tCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGt < 1:1249933/150‑1 (MQ=255) ccAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTa > 2:731420/1‑150 (MQ=255) aGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTAGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAg < 2:1144384/150‑1 (MQ=255) ggggATGAACATAAAGAGTACAGTTTTTGTAGTTTAGTTGGGTTACTACGGGTTT‑‑AAAATAACCCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTAATCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAg < 1:1530935/150‑1 (MQ=255) gAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCgg > 2:1383140/1‑150 (MQ=255) gAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCgg > 2:1348536/1‑150 (MQ=255) aCAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCgg > 1:1555063/1‑150 (MQ=255) aCAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGgcg > 2:461681/1‑150 (MQ=255) cAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGgcgc > 1:1176575/1‑150 (MQ=255) aaaaaGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGcgcg > 1:724320/1‑150 (MQ=255) aaaGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGtt > 2:952705/1‑150 (MQ=255) aaGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AATCCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTg < 1:626052/150‑1 (MQ=255) aCAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCt > 2:565704/1‑150 (MQ=255) cAGCTTTTGCAGATAAGTGGGGTTACTACGGGTAT‑‑AAAA‑TAACCGGGCGGGGCGGGTTTTTTTACGTTGGTTCAGATTTCTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCATCGTGCTCGATGTAAGCCATCGGCGCGTTGTCGCGTg < 2:1603756/150‑1 (MQ=255) cAGCTATTGTAGTTAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTg < 1:220535/150‑1 (MQ=255) aGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGc > 1:1153104/1‑150 (MQ=255) aGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGc < 2:1233819/150‑1 (MQ=255) aGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGc < 1:362293/150‑1 (MQ=255) gCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCa > 2:1390779/1‑150 (MQ=255) tATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACg > 1:1038416/1‑150 (MQ=255) tGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAAGCAGATCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGaa < 2:848555/150‑1 (MQ=255) gTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTGTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAg > 1:337004/1‑150 (MQ=255) aGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTACTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGcc > 1:1673530/1‑150 (MQ=255) gATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGccc > 2:607939/1‑149 (MQ=255) aTAAGTGGGGATACTACGGGTAT‑‑AAAA‑ACACCCGCCGGGGCGGGTTTTTTTACGTTGCGTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCcac < 1:295060/150‑1 (MQ=255) aTAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGcccc > 2:860788/1‑148 (MQ=255) aGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACt > 2:404418/1‑150 (MQ=255) gTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACtt > 2:1382628/1‑150 (MQ=255) gggggATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTc < 2:1456444/149‑1 (MQ=255) gggATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAg < 2:296480/150‑1 (MQ=255) ggATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACCCTTCAGa > 2:1329916/1‑150 (MQ=255) gATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGaa < 1:1383140/150‑1 (MQ=255) gATACTACGGGTAA‑‑AAAA‑ATACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGaa < 2:725795/150‑1 (MQ=255) tactacGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATa < 2:1102210/150‑1 (MQ=255) ccGGCTAT‑‑ACAA‑AAACCCGCCGGGGCGGGTTCTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCTCCTGCACGGAAGCCACACTTCAGAATACGAg < 2:1134604/149‑1 (MQ=255) acGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTTCTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCCTCGGCGCGTTGTCGCCTGCACGGAAGCCGCACTTCAGAATACGAg > 1:94311/1‑150 (MQ=255) gggTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAgtg < 1:584597/150‑1 (MQ=255) aacgt‑‑aAAA‑AAACCCGCCCCGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCGTCTGCTTTCTCTGAACGCTCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGGCTGCACGGAAGCCACACTTCTGAATACGAgtgt > 1:1467142/5‑150 (MQ=255) acgt‑‑aAAA‑AAACCCGCCCCGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTTCACGGAAGCCACACTTCAGAATACGAGTGTa > 1:39934/4‑150 (MQ=255) acgt‑‑aAAA‑AAACCCGCCCCGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTa > 1:1714578/4‑150 (MQ=255) t‑‑aAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTCGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAacc > 2:1352117/1‑150 (MQ=255) aaaa‑aaaCCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGACCGATCATCCAGCTCGATGTAAGCCATCGGCGCGTTGTCGACTGCAAGGAAGCCACCCTGCAGAATAAGAGTGTCaccc > 1:1667051/1‑149 (MQ=255) aaaa‑aaaCCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAacca > 2:1169534/1‑150 (MQ=255) aaaa‑aaaCCCGCCCCGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAacca > 2:527130/1‑150 (MQ=255) aaa‑aaaCCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCCTCGGCGCGTTGTCGCCTGCACGGAAGCCCCACTGCAGAATACGAGTGTAacccc > 2:1578403/1‑148 (MQ=255) aaa‑aaaCCCGCCCCGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAacctc > 1:11222/1‑148 (MQ=255) aaa‑aaaCCCGCCCCGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAaccac > 2:789497/1‑150 (MQ=255) aaa‑aaaCCCGCCCCGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAaccac > 2:812270/1‑150 (MQ=255) aa‑aaaCCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAGCGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGGAcccacc > 1:265487/1‑150 (MQ=255) aaaCCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCgg < 1:99479/150‑1 (MQ=255) cccGCCGTGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCTATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCGGCAc < 1:291463/150‑1 (MQ=255) cccGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCGGCAc > 1:434348/1‑150 (MQ=255) ggggCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCACCCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGACGCCACACTTCAGAATACGAGTGTAACCACCGGCACGGCTcg > 2:1698595/1‑150 (MQ=255) | AGGTTATCAAACTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAA‑AAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCGGCACGGCTCG > NC_000913/3439439‑3439737 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |