| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,439,589 | G→C | 9.5% | intergenic (‑80/+27) | yhdN ← / ← rplQ | DUF1992 family protein/50S ribosomal subunit protein L17 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,439,589 | 0 | G | C | 9.5% | 388.8 / 27.3 | 136 | intergenic (‑80/+27) | yhdN/rplQ | DUF1992 family protein/50S ribosomal subunit protein L17 |
| Reads supporting (aligned to +/- strand): ref base G (58/64); new base C (9/4); total (67/69) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.56e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.81e-02 | |||||||||||
Only 100 of 142 total aligned reads displayed.
GGTTATCAAACTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCGGCACGGCTCGC > NC_000913/3439440‑3439738 | ggTTATCAAACTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCgg > 2:940448/1‑150 (MQ=255) gTTATCAAACTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCggg > 2:423749/1‑150 (MQ=255) gTTATCAAACTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑‑AAAAAACCCGCCgggg < 2:1704666/150‑1 (MQ=255) ttATCAAACTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCgggg > 2:1368268/1‑150 (MQ=255) tATCAAACTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGc < 1:1578759/150‑1 (MQ=255) tATCAAACTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGc < 1:1276312/150‑1 (MQ=255) aTCAAACTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCg > 2:362293/1‑150 (MQ=255) cAAACTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCggg < 2:1220481/150‑1 (MQ=255) cAAACTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCggg < 2:896025/150‑1 (MQ=255) cAAACTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCAGGGGCggg > 1:1502678/1‑150 (MQ=255) aaaaTTCAGCTTGCGCTTGCGCTTCTGCTATATCGCGCTCGGCCCAGTGGTAAATAAACAACATAAATCCTCCCGGGCTTGACCAAAACGTGTACAGTTATTTTAGTAAAGTGGGTATATTAGGGTTAT‑‑AAAAAAACCCGCCGGGGCggg < 2:469433/149‑1 (MQ=255) aaCTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGtt > 1:1015477/1‑150 (MQ=255) aaCTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGtt < 2:1388252/150‑1 (MQ=255) aaCTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTACAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACACGCCGGGGCGGGtt > 1:876194/1‑150 (MQ=255) aCTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGttt < 1:512545/150‑1 (MQ=255) cTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCCCGGCGGGtttt < 2:408802/150‑1 (MQ=255) tCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAACTACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGGGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCCCGGCGGGttttt < 1:1511572/150‑1 (MQ=255) cattCGCGTGCGCTTCTGCTATCTGGCGCTCTGCCCACTGGGCAAGTAACCACATAAATACTCCCGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAA‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TAc < 1:1408071/148‑1 (MQ=255) cTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAACTACTCCAGGGGCTGAACAAAACGATTACAGCTATTGTAGATAAGTGTGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCTGGTTTTTT‑TAc < 1:1401063/150‑1 (MQ=255) tttCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGGCAATTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AATAAAACCCGCCGGGGCGGGTTTTTT‑TACg < 1:1161958/150‑1 (MQ=255) cTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACTAAAAGAGTACAGCTATTGTAGATAAGTGGGGATAGTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTGTTTT‑AACGTTGCt > 2:102100/1‑150 (MQ=255) cTGCTATATGGCGCTCAGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATCAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTAc < 1:604066/150‑1 (MQ=255) cTGATATATGGCGCTCTGCCCACTGGTCAAGGAACCACATAAATACTCCAGGGGATGAACAAAAAGAGGACAGCTATTGTAGATAAGTGGGGATCCGACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGGTGTTG‑GTCGTTGCTTCAGATGAc > 1:131105/1‑150 (MQ=255) tGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGTGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTAct < 2:195768/150‑1 (MQ=255) gCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTActc > 1:1177504/1‑150 (MQ=255) gCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTActc < 1:700119/150‑1 (MQ=255) gCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTActc > 1:541966/1‑150 (MQ=255) gCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTAAGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGATTTTT‑TACGTTGCTTCAGATGActc > 1:1331738/1‑150 (MQ=255) atatGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATCCTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTgt < 2:1174919/150‑2 (MQ=255) tatGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTgca > 1:1242394/1‑150 (MQ=255) tGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTgcagc > 2:769926/1‑150 (MQ=255) ggCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGTTGAACAAAAAGAGTACAGCTATTGTAGATAAGGGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTgcagca < 1:875364/150‑1 (MQ=255) gcTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTGCAGAGTAATCTgaagcaacg < 1:1044750/150‑4 (MQ=255) gCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGc < 1:443436/150‑1 (MQ=255) cACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGAGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCttt > 2:1355940/1‑150 (MQ=255) tGGTCAAGTAACCACATAAATACTCCCGGGGATGAACAAAAAGAGTCCAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTtctc < 2:892716/150‑1 (MQ=255) tGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTtctc < 1:736797/150‑1 (MQ=255) ggTCAAGTAACCACATAAATATTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTctct > 1:1102210/1‑150 (MQ=255) ggTCAAGTAACAACATAAATACTCCAGGGGATTAACAAAAATAGTACAGCTATTGTAGATAATTGTGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTctct < 2:270508/150‑1 (MQ=255) gTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTg < 2:1527527/150‑1 (MQ=255) cAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGaa < 1:643742/150‑1 (MQ=255) aaGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAACCCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAAc < 1:739390/150‑1 (MQ=255) aGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACg > 1:1144758/1‑150 (MQ=255) aGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACg < 1:621651/150‑1 (MQ=255) aCCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCa < 2:1271916/150‑1 (MQ=255) acaTAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAAcc < 2:1618675/150‑1 (MQ=255) caTAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCa > 2:451941/1‑150 (MQ=255) tAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCCGc > 2:159130/1‑150 (MQ=255) tCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGt < 1:1249933/150‑1 (MQ=255) ccAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTa > 2:731420/1‑150 (MQ=255) gAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCgg > 2:1383140/1‑150 (MQ=255) aCAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCgg > 1:1555063/1‑150 (MQ=255) aCAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCTTCGgcg < 1:227571/150‑1 (MQ=255) aCAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGgcg > 2:461681/1‑150 (MQ=255) cAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTTATACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGgcg > 2:834407/1‑150 (MQ=255) aaaaaGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGcgcg > 1:724320/1‑150 (MQ=255) aaaaaGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGcgcg > 2:1590317/1‑150 (MQ=255) aaaGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGtt > 2:1134921/1‑150 (MQ=255) aaaGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGtt > 2:952705/1‑150 (MQ=255) aatagTACAGCTCTTGTAGTTAAGTGGGGATACTACGGGTAT‑‑AAAAAACCCCGCCGGCGCGGGTTTTTT‑TACGTTGATTCTGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGTCGCGTTg < 2:1331738/147‑1 (MQ=255) agagTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGt > 1:1487481/1‑150 (MQ=255) aCAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCt > 2:565704/1‑150 (MQ=255) cAGCTATTGTAGTTAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTg < 1:220535/150‑1 (MQ=255) aGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGc > 1:1153104/1‑150 (MQ=255) aGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGc < 1:362293/150‑1 (MQ=255) cTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCAc > 2:1289246/1‑150 (MQ=255) tATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACg > 1:1038416/1‑150 (MQ=255) tATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACg < 1:565704/150‑1 (MQ=255) tGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAAGCAGATCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGaa < 2:848555/150‑1 (MQ=255) gTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAg > 1:393733/1‑150 (MQ=255) gTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTGTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAg > 1:337004/1‑150 (MQ=255) aGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGcc > 2:184638/1‑150 (MQ=255) aGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTACTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGcc > 1:1673530/1‑150 (MQ=255) gATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGccc > 2:607939/1‑149 (MQ=255) aTAAGTGGGGATACTACGGGTAT‑‑AAAAACACCCGCCGGGGCGGGTTTTTT‑TACGTTGCGTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCcac < 1:295060/150‑1 (MQ=255) aTAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGcccc > 2:860788/1‑148 (MQ=255) tGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTc < 1:1348536/150‑1 (MQ=255) gggggATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTc < 2:1456444/149‑1 (MQ=255) ggATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACCCTTCAGa > 2:1329916/1‑150 (MQ=255) gATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGaa < 1:1383140/150‑1 (MQ=255) gATACTACGGGTAA‑‑AAAAATACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGaa < 2:725795/150‑1 (MQ=255) tactacGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATa < 2:1102210/150‑1 (MQ=255) actacGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTATCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATAc > 2:385396/1‑150 (MQ=255) ccGGCTAT‑‑ACAAAAACCCGCCGGGGCGGGTTCTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCTCCTGCACGGAAGCCACACTTCAGAATACGAg < 2:1134604/149‑1 (MQ=255) acGGGTAT‑‑AAAAAAACCCGCCGGGGAGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAg < 2:1116248/150‑1 (MQ=255) gggTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAgtg < 2:1513507/150‑1 (MQ=255) aacgt‑‑aAAAAAACCCGCCCCGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCGTCTGCTTTCTCTGAACGCTCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGGCTGCACGGAAGCCACACTTCTGAATACGAgtgt > 1:1467142/5‑150 (MQ=255) gTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAg < 1:1696766/138‑1 (MQ=255) gTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAg > 2:1696766/1‑138 (MQ=255) t‑‑aAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAacc > 2:23500/1‑150 (MQ=255) t‑‑aAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTCGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAacc > 2:1352117/1‑150 (MQ=255) aaaaaaaCCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGACCGATCATCCAGCTCGATGTAAGCCATCGGCGCGTTGTCGACTGCAAGGAAGCCACCCTGCAGAATAAGAGTGTCaccc > 1:1667051/1‑149 (MQ=255) aaaaaaaCCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAacca > 2:1169534/1‑150 (MQ=255) aaaaaaCCCGCCCCGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGTAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAaccac > 2:560667/1‑150 (MQ=255) aaaaaaCCCGCCCCGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAacctc > 1:11222/1‑148 (MQ=255) aaaaaaCCCGCCCCGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAaccac > 2:789497/1‑150 (MQ=255) aaaCCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCgg < 1:99479/150‑1 (MQ=255) cccGCCGTGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCTATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCGGCAc < 1:291463/150‑1 (MQ=255) cccGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCGGCAc > 1:434348/1‑150 (MQ=255) gggCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCGGCACGGCTcgc < 2:1109407/150‑1 (MQ=255) | GGTTATCAAACTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑‑AAAAAAACCCGCCGGGGCGGGTTTTTT‑TACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCGGCACGGCTCGC > NC_000913/3439440‑3439738 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |