| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,610,537 | A→C | 6.1% | P399P (CCT→CCG) | yhhS ← | putative arabinose efflux transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,610,537 | 0 | A | C | 6.1% | 297.0 / 7.7 | 98 | P399P (CCT→CCG) | yhhS | putative arabinose efflux transporter |
| Reads supporting (aligned to +/- strand): ref base A (40/52); new base C (2/4); total (42/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.98e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.51e-01 | |||||||||||
CTTCCGTTATTCTGGGTAACGTGGGTAATCAACTGCTGACCATGCAAATTACGCTGCCCGCTGACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAACGCGATTGCGACCAGTCCCGCCGCCGCCAGATAAATCACCGGTACGCCCGCCCAGCTCATCACCAGCCCAGCCAGTGGTCCAGTCACGCCAAGC > NC_000913/3610388‑3610678 | ctTCCGTTATTCTGGGTAACGTGGGTAATCAACTGCTGACCATGCAAATTACGCTGCCCGCTGACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCa > 1:907106/1‑150 (MQ=255) tCCGTTATTCTTGGTAACGTGGGTAATCCACTGCTGACCATGCAAATTACGCTGCCCGCTGACGATCTGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACTCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAgg < 2:1119249/150‑1 (MQ=255) tCCGTTATTCTGGGTAACGTGGGTAATCAACTGCTGACCATGCAAATTACGCTGCCCGCTGACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAgg < 1:923480/150‑1 (MQ=255) gTTATTCTGGGTAACGTGGGTAATCAACTGCTGACCATGCAAATTACGCTGCCCGCTGACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGAc < 1:1110924/150‑1 (MQ=255) ttCTGGGTAACGTGGGTAATCAACTGCTGCCCATGCAAATTACGCTGCCCGCTGACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCATCAGGGACgtgt > 1:1293195/1‑150 (MQ=255) tGGGTAACGTGGGTAATCAACTGCTGACCATGCAAATTACGCTGCCCGCTGACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGT‑AGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCg > 2:1652752/1‑150 (MQ=255) gggTAACGTGGGTAATCAACTGCTGCCCATGCAAATTACGCTGCCCGCTGACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCg > 2:1463662/1‑150 (MQ=255) gggTAACGTGGGTAATCAACTGCTGACCATGCAAATTACGCTGCCCGCTGACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCg < 2:707211/150‑1 (MQ=255) ggTAACGTGGGTAATCAACTGCTGACCATGCAAATTACGCTGCCCGCTGACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCgg < 1:514098/150‑1 (MQ=255) ggTAACGTGGGTAATCAACTGCTGACCATGCAAATTACGCTGCCAGCTGACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATGCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCgg < 1:289669/150‑1 (MQ=255) gTAACGTGGGTAATCAACTGCTGACCATGCAAATTACGCTGCCCGCTGACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGCGGCGGCCTCAGGGACGTGTTCCGGa > 1:154999/1‑150 (MQ=255) gTAACGTGGGTAATCAACTGCTGACCATGCAAATTACGCTGCCCGCTGACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGa < 1:1672905/150‑1 (MQ=255) aaCGTGGGTAATCAACTGCTGACCATGCAAATTACGCTGCCCGCTGACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCCGGAACACGTCCCTGAgg < 2:165678/150‑1 (MQ=255) aCGTGGGTAATCAACTGCTGACCATGCAAATTACGCTGACCGCTGACGATCAGCAAAAAGCGCAGACCAACGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCCGGAACACGTCCCTGAGGc < 2:149398/150‑1 (MQ=255) cGTGGGTAATCAACTGCTGACCATGCAAATTACGCTGCCCGCTGACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCCGGAACACGTCCCTGAGGcc < 2:1155426/150‑1 (MQ=255) cGTGGGTAATCAACTGCTGACCATGCAAATTACGCTGCCCGCTGACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGcc < 2:1212377/150‑1 (MQ=255) gggTAATCAACTGCTGACCATGCAAATTACGCTGCCCGCTGACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGATTTAAGATGATGAGGCGGCCTCCGGAACACGTCCCTGAGGCCgcc < 2:1252525/150‑3 (MQ=255) ggTAATCAACTGCTGACCATGCAAATTACGCTGCCCGCTGACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑ttt < 1:1473912/150‑1 (MQ=255) gTAATCAACTGCTGACCATGCAAATTACGCTGCCCGCTGACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑tttt < 1:322257/150‑1 (MQ=255) aaTCAACTGCTGACCATGCAAATTACGCTGCCCGCTGACGATCATCAAAAATCGCAGACCACCGCAGAAAACATCATTAATACGCTTGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑tttttt < 1:1510793/150‑1 (MQ=255) aaTCAACTGCTGACCAACCAAATTACGCTGCCCGCTGACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑tttttt < 1:150205/150‑1 (MQ=255) aTCAACTTCTGTCCATGCAAATTACGCTGCCCGCTGACGATCTGCTAAAAGCGCAGACCACCGCAGAAAACATCAATAATACGCTGGTTCTTCAGTAAGTTTAAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑ttttttt < 2:1381750/150‑1 (MQ=255) aTCAACTGCTGACCATGCAAATTACGCTGCCCGCTGACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACAGCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑ttttttt < 1:681/150‑1 (MQ=255) aTCAACTGCTGACCATGCAAATTACGCTGCCCGCTGACGATCAGCAAAAAGCCCAGACCGCCGCAGAAACCATCATTAATACGCTGGATATTGAGTAAGTGTTAAGATGATGATGCGGACTCAGTGACGAGTTCCGTAGTCCG‑gtttttt > 2:93418/1‑150 (MQ=255) cAACTGCTGACCATGCAAATTACGCTGCCCGCTGACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTAAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTaa > 2:1102172/1‑150 (MQ=255) aCTGCTGACCATGCAAATTACGCTGCCCGCTGACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATc > 1:435897/1‑150 (MQ=255) aCTGCTGACCATGCAAATTACGCTGCCCGCTGACGAACAAAAAAAACCGCTCCCCAACGCAGAAAAAATCATAAATACGGTGGTTATTCTTTAAGTTTTAAGATGATGAGCCGGCATCAGGGACGTGTTCCGAAGGCCG‑TTTTTTTAATc > 2:1328524/1‑150 (MQ=255) ctgctgACCATGCAAATTACGCTGCCCGCTGACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCg < 1:127945/150‑1 (MQ=255) gctgACCATGCAAATTACGCTGCCCGCTGACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGcc < 1:752667/150‑1 (MQ=255) ctgACCATGCAAATTACGCTGCCCGCTGACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCa < 1:991249/150‑1 (MQ=255) ctgACCATGCAAATTACGCTGCCCGCTGACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCa < 1:639200/150‑1 (MQ=255) gACCATGCAAATTACGCTGCCCGCTGACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACg < 2:1631463/150‑1 (MQ=255) aCCATGCAAATTACGCTGCCCGCTGACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGt > 2:1561000/1‑150 (MQ=255) ccATGCAAATTACGCGGCCCGCTGACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTCGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTc < 1:1084689/150‑1 (MQ=255) cATGCAAATTACGCTGCCCGCTGACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCa > 2:1529623/1‑150 (MQ=255) aTGCAAATTACGCTGCCCGCTGACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAg > 1:997797/1‑150 (MQ=255) tGCAAATTACGCTGCCCGCTGACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGt > 1:584728/1‑150 (MQ=255) cAAATTACGCTGCCCGCTGACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGtaa > 1:340072/1‑150 (MQ=255) aaTTACGCTGCCCGCTGACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGtaata < 1:1542657/150‑1 (MQ=255) atACGCTGCCCGCTGACGATCTGCAAACAGCGCAGACCACCTCAGACAACATAATTAATTCGCTGGTTATTCAGTAAGTCTTAACATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAAc < 1:292060/149‑1 (MQ=255) tACGCTGCCCGCTGACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTACTACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAAcg < 1:439213/150‑1 (MQ=255) aCGCTGCCCGCTGACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCGTTTTTTTTAATCGCCACGTCAGTAATAAcg > 2:710021/1‑150 (MQ=255) cTGCCCGCTGACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAACGCGAt > 1:761023/1‑150 (MQ=255) cTGCCCGCTGACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAACGCGAt < 1:222391/150‑1 (MQ=255) tGCCCGCTGACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAACGCGAtt > 1:428617/1‑150 (MQ=255) gCCCGCTGACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAACGCGATTg > 2:1325422/1‑150 (MQ=255) gCCCGCTGACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAACGCGATTg < 1:1346059/150‑1 (MQ=255) cccGCTGACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAACGCGATTGc < 2:1731293/150‑1 (MQ=255) ccGCTGACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACCTCAGTAATAACGCGCTTGCg > 1:1037833/1‑150 (MQ=255) gCTGACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAACGCGATTGCGAc > 1:988383/1‑150 (MQ=255) cTGACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAACGCGATTGCGAcc < 2:781167/150‑1 (MQ=255) gACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAACGCGATTGCGACCAg < 2:55812/150‑1 (MQ=255) cGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAACGCGATTGCGACCAGTc > 2:967220/1‑150 (MQ=255) gATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAACGCGATTGCGACCAGTcc < 1:700607/150‑1 (MQ=255) gATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAACGCGATTGCGACCAGTcc > 2:477584/1‑150 (MQ=255) aTCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAACGCGATTGCGACAAGTccc > 2:827723/1‑150 (MQ=255) cAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAACGCGATTGCGACCAGTCccgc > 1:533884/1‑150 (MQ=255) aGCAAATTGCGCAGACCCCCGCAGAATCCATCAGTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGTGGCGG‑GTTGTTTAATCGCCCCGTCAGTAATAACGCGATTGCGACCATGCccgcc > 2:917117/1‑150 (MQ=255) aGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGACACGTCAGTAATAACGCGATTGCGACCAGTCccgcc > 1:121672/1‑150 (MQ=255) gCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAACGCGATTGCGACCAGTCccgccg > 1:754940/1‑150 (MQ=255) gCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAACGCGATTGCGACCAGTCccgccg < 1:1118410/150‑1 (MQ=255) cAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAACGCGATTGCGACCAGTCccgccgc < 2:1583047/150‑1 (MQ=255) cAAAAAGCGCAGAACACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAACGCGATTGCGACCAGTCccgccgc < 2:1591605/150‑1 (MQ=255) gcgcAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAACGCGATTGCGACCAGTCCCGCCGCCGCCAg < 2:340072/150‑1 (MQ=255) ccgcAGTCCACCGCACAAAACATCATTTATAGGCTGGTTATTCCGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAACGCGATTGCGACCAGTCCCGCCGCCGCCAg < 2:1505162/149‑1 (MQ=255) accaccGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGGGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAACGCGATTGCGACCAGTCCCGCCGCCGCCAGATAAAt < 1:1652487/150‑1 (MQ=255) ccaccGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAACGCGATTGCGACCAGTCCCGCCGCCGCCAGATAAATc > 1:1551145/1‑150 (MQ=255) ccaccGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAACGCGATTGCGACCAGTCCCGCCGCCGCCAGATAAATc > 1:1692024/1‑150 (MQ=255) ccGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAACGCGATTGCGACCAGTCCCGCCGCCGCCAGATAAATCAcc > 2:1382040/1‑150 (MQ=255) ccGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCAACGTCAGTAATAACGCGATTGCGACCAGTCCCGCCGCCGCCAGATAAATCAcc < 1:1118912/150‑1 (MQ=255) ccGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCAG‑TTTTTTTAATCGCCACGTCAGTAATAACGCGATTGCGACCAGTCCCGCCGCCGCCAGATAAATCAcc > 2:1194779/1‑150 (MQ=255) cGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAACGCGATTGCGACCAGTCCCGCCGCCGCCAGATAAATCACCg > 2:927557/1‑150 (MQ=255) cAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAACGCGATTGCGACCAGTCCCGCCGCCGCCAGATAAATCACCGGt < 1:1529623/150‑1 (MQ=255) gAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCTCCACGTCAGTAATAACGCGATTGCGACCAGTCCCGCCGCCGCCAGATAAATCACCGGTAc > 1:146054/1‑150 (MQ=255) gAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGCAGCCCG‑TTTTTTTAATAGCCACGTCAGTAATAACGCGATTGCGACCAGTCGCGCCGCCGCCAGATAAATCACCGGTAc > 1:966636/1‑150 (MQ=255) aaCATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCGTTTTTTTTAATCGCCACGTCAGTAATAACGCGATTGCGACCAGTCCCGCCGCCGCCAGATAAATCACCGGTAcgc < 1:710021/150‑1 (MQ=255) aaCATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAACGCGATTGCGACCAGTCCCGCCGCCGCCAGATAAATCACCGGTAcgcc < 2:328532/150‑1 (MQ=255) aCATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAACGCGATTGCGACCAGTCCCGCCGCCGCCAGATAAATCACCGGTAcgccc < 1:1715563/150‑1 (MQ=255) atTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAACGCGATTGCGACCAGTCCCGCCGCCGCCAGATAAATCACCGGTACGCCCGCCCa < 2:971538/150‑1 (MQ=255) aaTACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAACGCGATTGCGACCAGTCCCGCCGCCGCCAGATAAATCACCGGTACGCCCGCCCAGCt < 2:614054/150‑1 (MQ=255) aaTACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAACGCGATTGCGACCAGTCCCGCCGCCGCCAGATAAATCACCGGTACGCCCGCCCAGCt < 2:420695/150‑1 (MQ=255) tGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAACGCGATTGCGACCAGTCCCGCCGCCGCCAGATAAATCACCGGTACGCCCGCCCAGCTCATCAcc < 2:515655/150‑1 (MQ=255) ggTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAACGCGATTGCGACCAGTCCCGCCGCCGCCTGATAAATCACCGGTACGCCCGCCCAGCTCATCCcca > 1:386350/1‑150 (MQ=255) aTTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAACGCGATTGCGACCAGTCCCGCCGCCGCCAGATAAATCACCGGTACGCCCGCCCAGCTCATCAccagccc > 2:1692665/1‑150 (MQ=255) aGTAAGTTTTTAGATGATGAGGCGGCCTCAGGGACGTGATCCGGAGGCCG‑TGTTTTTAATCGCCACGTCAGTAATAACGCGATTGCGACCAGTCCCGCCGCCGCCAGATAAATCACCGGTACGCCCGCCCTGCTCATCACcagcccagcc < 1:204652/150‑1 (MQ=255) aGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCCCGTCAGTAATAACGCGATTGCGACCAGTCCCGCCGCCGCCAGATAAATCCCCGGTACGCCCGCCCAGCTCATCACccgccccgcc > 2:1621676/1‑150 (MQ=255) taGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAACGCGATTGCGACCAGTCCCGCCGCCGCCAGATAAATCACCGGTACGCCCGCCCAGCTCATCACCAGCCCAGCCAGt < 1:1652752/149‑1 (MQ=255) gTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAACGCGATTGCGACCAGTCCCGCCGCCGCCAGATAAATCACCGGTACGCCCGCCCAGCTCATCACCAGCCCAGCCAGTgg < 1:1458062/150‑1 (MQ=255) gTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTGCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAACGCGATTGCGACCAGTCCCGCCGCCGCCAGATAAATCACCGGTACGCCCGCCCAGCTCATCACCAGCCCAGCCAGTgg < 2:1355442/150‑1 (MQ=255) ttttAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAACGCGATTGCGACCAGTCCCGCCGCCGCCAGATAAATCACCGGTACGCCCGCCCAGCTCATCACCAGCCCAGCCAGTGGt > 1:664998/1‑150 (MQ=255) tttAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑GTTTTTTAATCGCCACGTCAGTAATAACGCGATTGCGACCAGTCCCGCCGCCGCCAGATAAATCACCGGTACGCCCGCCCAGCTCATCACCAGCCCAGCCAGTGGTc < 2:1248449/150‑1 (MQ=255) ttAAGATGATGTGGCGGCGTCAGGGACGTGTTCCGGAGGCAG‑TTTTTTAAATCGCCACGTGAGTAATAACGCGTTTGCGACCAGTCCCGCCGCCGCCAGATAAATCACCGGTACGCCCGCCCAGCTCATCACCAGCCCAGCAAGTGGTcc < 2:1127967/150‑1 (MQ=255) aaGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAACGCGATTGCGACCAGTCCCGCCGCCGCCAGATAAATCACCGGTACGCCCGCCCAGCTCATCACCAGCCCAGCCAGTGGTCCAg > 1:402729/1‑150 (MQ=255) gatgatGAGGCGGCCTCAGGGACGTGTTCGGGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAACGCGATTGCGACCAGTCCCGCCGCCGCCAGATAAATCACCGGTACTACCGGCCATCTCATCACAAGCCCAGCCAGGGGAGCAGTc > 2:1051326/1‑150 (MQ=255) gatgaGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAACGCGATTGCGACCAGTCCCGCCGCCGCCAGATAAATCACCGGTACGCCCGCCCAGCTCATCACCAGCCCAGCCAGTGGTCCAGTCACg < 1:11585/150‑1 (MQ=255) gaGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAACGCGATTGCGACCAGTCCCGCCGCCGCCAGATAAATCACCGGTACGCCCGCCCAGCTCATCACCAGCCCAGCCAGTGGTCCAGTCACGCCa < 1:597606/150‑1 (MQ=255) aaaacggcCTCCGGAACACGTCCCTGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAACGCGATTGCGACCAGTCCCGCCGCCGCCAGATAAATCACCGGTACGCCCGCCCAGCTCATCACCAGCCCAGCCAGTGGTCCAGTCACGCCa > 1:1724403/5‑150 (MQ=255) aGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAACGCGATTGCGCCCAGTCCCGCCGCCGCCAGATAAATCACCGGTACGCCCGCGCAGCTCATCACCAGCCCAGCCAGTGGTCCAGTCCCGCCac > 1:560142/1‑149 (MQ=255) acggcCTCCGGAACACGTCCCTGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAACGCGATTGCGACCAGTCCCGCCGCCGCCAGATAAATCACCGGTACGCCCGCCCAGCTCATCACCAGCCCAGCCAGTGGTCCAGTCACGCCAAGc > 2:1718908/2‑150 (MQ=255) | CTTCCGTTATTCTGGGTAACGTGGGTAATCAACTGCTGACCATGCAAATTACGCTGCCCGCTGACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAAGTTTTAAGATGATGAGGCGGCCTCAGGGACGTGTTCCGGAGGCCG‑TTTTTTTAATCGCCACGTCAGTAATAACGCGATTGCGACCAGTCCCGCCGCCGCCAGATAAATCACCGGTACGCCCGCCCAGCTCATCACCAGCCCAGCCAGTGGTCCAGTCACGCCAAGC > NC_000913/3610388‑3610678 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |