| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 448,966 | T→C | 6.0% | H559R (CAC→CGC) ‡ | cyoB ← | cytochrome o ubiquinol oxidase subunit I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 448,966 | 0 | T | C | 6.0% | 329.7 / 9.2 | 117 | H559R (CAC→CGC) ‡ | cyoB | cytochrome o ubiquinol oxidase subunit I |
| Reads supporting (aligned to +/- strand): ref base T (46/63); new base C (4/3); total (50/67) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.62e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.49e-01 | |||||||||||
Only 100 of 119 total aligned reads displayed.
GCCAGATCATGGCGAAACCGAAGATGGTGGAGAAAGCTGCAATGACGATACCTGCACCGCTGTTTTTCGGCATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTCCAGCGTACGGCCACCCCACGGGTCGCCAGTCAGGTCACGGTTCTGGTCGCGGTCGCGAATAGAAACGTACATCTGAATAACGAGGCAGAG > NC_000913/448817‑449114 | gCCAGATCATGGCGAAACCGAAGATGGTGGAGAAAGCTGCAATGACGATACCTGCACCGCTGTTTTTCGGCATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGt > 2:1465021/1‑150 (MQ=255)gCCAGATCATGGCGAAACCGAAGATGGTGGAGAAAGCTGCAATGACGATACCTGCACCGCTGTTTTTCGGCATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGt > 2:669256/1‑150 (MQ=255) ccAGATCATGGCGAAACCGAAGATGGTGGAGAAAGCTGCAATGACGATACCTGCACCGCTGTTTTTCGGCATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTg > 2:425399/1‑150 (MQ=255) gATCATGGCGAAACCGAAGATGGTGGAGAAAGCTGCAATGACGATACCTGCACCGCTGTTTTTCGGCATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTATCATTTCCCAGAATGCATCACGTTCGTGAAc > 1:902097/1‑150 (MQ=255) tCATGGCGAAACCGAAGATGGTGGAGAAAGCTGCAATGACGATACCTGCACCGCTGTTTTTCGGCATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCACGAACGt < 2:217679/150‑1 (MQ=255) cATGGCGAAACCGAAGATGGTGGAGAAAGCTGCAATGACGATACCTGCACCGCTGTTTTTCGGCATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTg > 1:662563/1‑150 (MQ=255) aTGGCGAAACCGAAGATGGTGGAGAAAGCTGCAATGACGATACCTGCACCGCTGTTTTTCGGCATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGc > 1:148214/1‑150 (MQ=255) tGGCGAAACCGAAGATGGTGGAGAAAGCTGCAATGACGATACCTGCACCGCTGTTTTTCGGCATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCg < 2:1567963/150‑1 (MQ=255) ggCGAAACCGAAGATGGTGGAGAAAGCTGCAATGACGATACCTGCACCGCTGTTTTTCGGCATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCAAGAATGCATCACGTTCGTGAACGTGCgg > 2:1427165/1‑150 (MQ=255) gCGAAACCGAAGATGGTGGAGAAAGCTGCAATGACGATACCTGCACCGCTGTTTTTCGGCATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGc < 1:1169264/150‑1 (MQ=255) gCGAAACCGAAGATGGTGGAGAAAGCTGCAATGACGATACCTGCACCGCTGTTTTTCGGCATATGAATTTCTTCATAGTGGTCAGACTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGc < 2:1275061/150‑1 (MQ=255) gCGAAACCGAAGATGGGTGAGAAAGCTGCAATGACGATACCTGCACCGCTGTTTTTCGGCATATGAATTTCTTCTTAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCACGAACGTgatgc < 1:654010/150‑5 (MQ=255) gAATCCGAAGATGGTGGAGAAAGCTGCAATGACGATACCTGCACCGCTGTTTTTCGGCATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCAc < 1:1015763/150‑1 (MQ=255) gAAACCGAAGATGGTGGAGAAAGCTGCAATGACGATACCTTCACCGCTGTTTTTCGGCATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCAc < 2:18623/150‑1 (MQ=255) gAAACCGAAGATGGTGGAGAAAGCTGCAATGACGATACCTGCACCGGTGTTTTTCGGCATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCAc < 2:1644675/150‑1 (MQ=255) gAAACCGAAGATGGTGGAGAAAGCTGCAATGACGATACCTGCACCGCTGTTTTTCGGCATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCAc > 2:855473/1‑150 (MQ=255) aaCCGTAGATGGTGGAGAAAGCTGCAATGTCGATACCTGCTCCGCTGTTTTTCGTCATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCTTCACGTTCGTGAACGTGCGGCACTa < 1:43252/150‑1 (MQ=255) aaCCGAAGATGGTGGAGAAAGCTGCAATGACGATACCTGCACCGCTGTTTTTCGGCATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTa > 2:737328/1‑150 (MQ=255) ccGAAGATGGTGGAGAAAGCTGCAATGACGATACCTGCACCGCTGTTTTTCGGCATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCTCTACg > 2:474326/1‑150 (MQ=255) cGAAGATGGTGGAGAAAGCTGCAATGACGATACCTGCACCGCTGTTTTTCGGCATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACgg < 1:441243/150‑1 (MQ=255) cGAAGATGGTGGAGAAAGCTGCAATGACGATACCTGCACCGCTGTTTTTCGGCATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACgg < 1:781809/150‑1 (MQ=255) gAAGATGGTGGAGTAAGCGGCTATGTCGATACCTGCACCGCTGTTGTTCGGCATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGc < 2:350219/150‑1 (MQ=255) gAAGATGGTGGAGAAAGCTGCAATGACGATACCTGCACCGCTGTTTTTCGGCATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGc < 1:729822/150‑1 (MQ=255) gAAGATGGTGGAGAAAGCTGCAATGACGATACCTGCACCGCTGTTTTTCGGCATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGc < 2:745211/150‑1 (MQ=255) gATGGTGGAGAAAGCTGCAATGACGATACCTGCACCGCTGGTTTTCGGCATATGAATTTCTTCATAGTGGTCA‑GCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAg < 1:841305/150‑1 (MQ=255) aTGGTGGAGAAAGCTGCAATGACGATACCTGCACCGCTGTTTTTCGGCATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAg < 1:996963/150‑1 (MQ=255) aTGGTGGAGAAAGCTGCAATGACGATACCTGCACCGCTGTTTTTCGGCATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAg > 2:573652/1‑150 (MQ=255) ggAGAAAGCTGCAATGACGATACCTGCACCGCTGTTTTTCGGCATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTGCGCCTTACTGTTTCATTTCCCAGAATGCATCACGTTCGTTACAGGGCGGCCCTACGGCAAAGTtata > 1:1073898/1‑150 (MQ=255) agaAAGCTGCAATGACGATACCTGCACCGCTGTTTTTCGGCATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGa > 1:1265268/1‑150 (MQ=255) aGCTGCAATGACGATACCTGCACCGCTGTTTTTCGGCATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGACACTACGGCAAAGTTATAGAACgg < 2:666323/150‑1 (MQ=255) cTGCAATGACGATACCTGCACCGCTGTTTTTCGGCATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAg > 2:452695/1‑150 (MQ=255) gCAATGACGATACCTGCACCGCTGTTTTTCGGCATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGc > 1:1651287/1‑150 (MQ=255) gCAATGACGATACCTGCACCGCTGTTTTTCGGCATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGc > 2:542233/1‑150 (MQ=255) gCAATGACGATACCTGCACCGCTGTTTTTCGGCATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGc > 2:526651/1‑150 (MQ=255) aTGACGATACCTGCACCGCTGTTTTTCGGCATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCACGAACGTgatg > 1:1073991/1‑116 (MQ=255) aTGACGATACCTGCACCGATTTTTTTCGTCATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCGAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCggg < 2:1546523/150‑1 (MQ=255) aTACCTGCACCGCTGTTTTTCGGCATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAagag < 1:9812/150‑1 (MQ=255) tACCTGCACCGCTGTTTTTCGGCATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAgg < 1:452695/150‑1 (MQ=255) tACCTGCACCGCTGTTTTTCGGCAAATGAATTTCTTCATAGTGGTCAGGCTGTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCAGCACGTTCGTGAACGCGCGGCACTACGGAAAAGTTATAGAACGGAGGCGGGGAAGCgg < 2:1464206/150‑1 (MQ=255) ccTGCACCGCTGTTTTTCGGCATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGtt > 1:1394750/1‑150 (MQ=255) cTGCACCGCTGTTTTTCGGCATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTg < 1:600962/150‑1 (MQ=255) cTGCACCGCTGTTTTTCGGCATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTg < 2:848258/150‑1 (MQ=255) gCACCGCTGTTTTTCGGCATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGcc < 2:1035572/150‑1 (MQ=255) gCACCGCTGTTTTTCGGCATATGAATTTCTTCATAGTGGTCAGGCGTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGcc < 2:669514/150‑1 (MQ=255) cACCGCTGTTTTTCTGCATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGccc < 1:67646/150‑1 (MQ=255) cACCGCTGTTTTTCGGCATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTTTAGAACGGAGGCGGGGAAGAGGTTGccc < 2:1640021/150‑1 (MQ=255) cACCGCTGTTTTTCGGCATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGccc > 1:55184/1‑150 (MQ=255) cACCGCTGTTTTTCGGCATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGccc < 1:984384/150‑1 (MQ=255) cACCGCTGTTTTTCGGCATAGGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTGCGCCTTTCTATTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGccc < 2:310023/150‑1 (MQ=255) cTGTTTTTCGGCATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTcc > 2:1312455/1‑150 (MQ=255) tttttCGGCATATGAATATCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGATCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTCCAGc < 1:54638/150‑1 (MQ=255) cATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTCCAGCGTACGGcc > 1:1013387/1‑150 (MQ=255) cATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTCCAGCGTACGGcc > 1:1200934/1‑150 (MQ=255) cATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATAACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGCCGGGGAAGAGGTTGCCCACTCCAGCGTACGGcc > 2:1333695/1‑150 (MQ=255) tatGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTCCAGCGTACGGCCAc > 2:1702011/1‑150 (MQ=255) aTTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTCCAGCGTACGGCCACCCCAc < 2:1552603/150‑1 (MQ=255) tttCTTCATAGTGGGCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTCCAGCGTACGGCCACCCCACg < 1:926370/150‑1 (MQ=255) tcATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTCCAGCGTACGGCCACCCCACGGGTCg > 2:260028/1‑150 (MQ=255) tcATAGTGGTCAGGCTTTTTATACGCTTCGCCTATCTCTTTCATTTCCCAGAATGAATCACGTTCGTCAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTCCAGCGTACGGCCACCCCACGGGTCg < 1:114916/150‑1 (MQ=255) aTAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTCCAGCGTACGGCCACCCCACGGGTCGcc < 1:1102467/150‑1 (MQ=255) aTAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATATCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTCCAGCGTACGGCCACCCCACGGGTCGcc < 1:21236/150‑1 (MQ=255) aGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTCCAGCGTACGGCCACCCCACGGGTCGCCAg < 2:590056/150‑1 (MQ=255) ggTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTCCAGCGTACGGCCACCCCACGGGTCGCCAGTCa < 2:813596/150‑1 (MQ=255) ggcAGGCTGTTTATACGCTTCGCCGATCTCTTTCCTTTCCCAGAATGCATCACGTGCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTCCAGCGTACGGCCACCCCACGGGTCGCCAGTCAg < 1:1064101/148‑1 (MQ=255) cAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTCCAGCGTACGGCCACCCCACGGGTCGCCAGTCAGGt > 2:554073/1‑150 (MQ=255) ggCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTCCAGCGAACGGCCACCCCACGGGTCGCCAGTCAGGTCa > 2:1006697/1‑150 (MQ=255) ttATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTCCAGCGTACGGCCACCCCACGGGTCGCCAGTCAGGTCACGGTTc > 1:631568/1‑150 (MQ=255) tataCGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGATCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGATGAGGTTGACCACTCCAGCGTACGGCCACCCCACGGGTCGACAGTCAGGTCACGGTTCt > 1:1005406/1‑150 (MQ=255) cGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTCCAGCGTACGGCCACCCCACGGGTCGCCAGTCAGGTCACGGTTCTggtc > 2:863541/1‑150 (MQ=255) cTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTCCAGCGTACGGCCACCCCACGGGTCGCCAGTCAGGTCACGGTTCTggtcgc < 1:55271/150‑1 (MQ=255) tCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTCCAGCGTACGGCCACCCCACGGGTCGCCAGTCAGGTAACGGTTCTggtcgcgg > 2:1264733/1‑150 (MQ=255) cTTTCTCTTTCATTTACCAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTCCAGCGTACGGCCACCCCACGGGTCGCCAGTCAGGTCACGGTTCTggtcgcggtcgc > 2:1449019/1‑150 (MQ=255) tctcTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTCCAGCGTACGGCCACCCCACGGGTCGCCAGTCAGGTCACGGTTCTGGTCGCGGTCGCGaa < 1:1465021/150‑1 (MQ=255) ctctTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGGTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTCCAGCGTACGGCCACCCCACGGGTCGCCAGTCAGGTCACGGTTCTGGTCGCGGTCGCGAAt < 1:425399/150‑1 (MQ=255) tctTTCATTTCCGAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCAGACTCCAGCGTACGGCCACCCCACGGGTCGCCAGTCAGGTCACGGTTCTGGTCGCGGTCGCGAATa < 2:825842/150‑1 (MQ=255) tctTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTCCAGCGTACGGCCACCCCACGGGTCGCCAGTCAGGTCACGGTTCTGGTCGCGGTCGCGAATa < 2:1386390/150‑1 (MQ=255) ctTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTCCAGCGTACGGCCACCCCACGGGTCGCCAGTCAGGTCACGGTTCTGGTCGCGGTCGCGAATAg < 1:1663381/150‑1 (MQ=255) ctTTCATTTCCCAGAATGCATCACGATCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTCCAGCGTACGGCCACCCCACGGGTCGCCAGTCAGGTCACGGTTCTGGTCGCGGTCGCGAATAg < 1:669256/150‑1 (MQ=255) aTTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTCCAGCGTACGGCCACCCCACGGGTCGCCAGTCAGGTCACGGTTCTGGTCGCGGTCGCGAATAGAAACg < 2:1577623/150‑1 (MQ=255) tCCTAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTCCAGCGTACGGCCACCCCACGGGTCGCCAGTCAGGTCACGGTTCTGGTCGCGGTCGCGAATAGAAACGTaa > 2:1579518/1‑149 (MQ=255) cccAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTCCAGCGTACGGCCACCCCACGGGTCGCCAGTCAGGTCACGGTTCTGGTCGCGGTCGCGAATAGAAACGTACa > 1:163917/1‑150 (MQ=255) ccAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTCCAGCGTACGGCCACCCCACGGGTCGCCAGTCAGGTCACGTTTCTATTCGCGACCGCGACCAGAACCGtgacc < 1:855473/150‑5 (MQ=38) ccAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTCCAGCGTACGGCCACCCCACGGGTCGCCAGTCAGGTCACGGTTCTgg > 1:589464/1‑124 (MQ=255) ccAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTCCAGCGTACGGCCACCCCACGGGTCGCCAGTCAGGTCACGGTTCTgg < 2:589464/124‑1 (MQ=255) ccAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTACCCACTCCAGCGTACGGCCACCCCACGGGTCGCCAGTCAGGTCACGTTTCTATTCGCGACCGCGACCAGAACCGtgacc < 1:542233/150‑5 (MQ=38) cAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTCCAGCGTACGGCCACCCCACGGGTCGCCAGTCAGGTCACGGTGCTGGTCGCGGTCGCGAATAGAAACGTACATc < 1:1711723/150‑1 (MQ=255) gAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTCCAGCGTACGGCCACCCCACGGGTCGCCAGTCAGGTCACGGTTCTGGTCGCGGTCGCGAATAGAAACGTACATCTg < 1:1730155/150‑1 (MQ=255) gAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTCCAGCGTACGGCCACCCCACGGGTCGCCAGTCAGGTCACGGTTCTGGTCGCGGTCGCGAATAGAAACGTACATCTg < 1:827230/150‑1 (MQ=255) tGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTCCAGCGTACGGCCACCCCACGGGTCGCCAGTCAGGTCACGGTTCTGGTCGCGGTCGCGAATAGAAACGTACATCTGAAt < 1:573652/150‑1 (MQ=255) gccgcACGTTCACGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTCCAGCGTACGGCCACCCCACGGGTCGCCAGTCAGGTCACGGTTCTGGTCGCGGTCGCGAATAGAAAGGTACATCTGAATa > 2:247310/5‑150 (MQ=255) gCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTCCAGCGTACGGCCACCCCACGGGTCGCCAGTCAGGTCACGGTTCTGGTCGCGGTCGCGAATAGAAACGTACATCTGAATa < 2:1265268/150‑1 (MQ=255) cgcACGTTCGGGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTCCAGCGTACGGCCACCCCACGGGTCGCCAGTCAGGTCACGGTTCTGGTCGCGGTCGCGAATAGAAACGTACATCTGAATAAc < 1:336857/148‑1 (MQ=255) tCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTCCAGCGTACGGCCACCCCACGGGTCGCCAGTCAGGTCACGGTTCTGGTCGCGGTCGCGAATAGAAACGTACATCTGAATAACg > 1:882103/1‑150 (MQ=255) gcACGTTCACGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTCCAGCGTACGGCCACCCCACGGGTCGCCAGTCAGGTCACGGTTCTGGTCGCGGTCGCGAATAGAAACGTACATCTGAATAACg > 2:632917/2‑150 (MQ=255) gcACGTTCACGAACGTGATGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTCCAGCGTACGGCCACCCCACGGGTCGCCCGTCAGGTCACGGTTCTGGTCGCGGTCGCGAATAGAAACGTACATCTGAATAACg > 2:293659/2‑150 (MQ=255) cACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTCCAGCGTACGGCCACCCCACGGGTCGCCAGTCAGGTCACGGTTCTGGTCGCGGTCGCGAATAGAAACGTACATCTGAATATCGa > 2:533373/1‑150 (MQ=255) aCGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTCCAGCGTACGGCCACCCCACGGGTCGCCAGTCAGGTCACGGTTCTGGTCGCGGTCGCGAATTGAAACGGACATCTGAATAACGAg > 1:1713849/1‑150 (MQ=255) cGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTCCAGCGTACGGCCACCCCACGGGTCGCCAGTCAGGTCACGGTTCTGGTCGCGGTCGCGAATAGAAACGTACATCTGAATAACGAgg < 1:737328/150‑1 (MQ=255) gTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTCCAGCGTACGGCCACCCCACGGGTCGCCAGTCAGGTCACGGTTCTGGTCGCGGTCGCGAATAGAAACGTACATCTGAATAACGAGGCagag > 1:1368321/1‑150 (MQ=255) gTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTCCAGCGTACGGCCACCCCACGGGTCGCCAGTCAGGTCACGGTTCTGGTCGCGGTCGCGAATAGAAACGTACATCTGAATAACGAGGCagag < 2:1408595/150‑1 (MQ=255) | GCCAGATCATGGCGAAACCGAAGATGGTGGAGAAAGCTGCAATGACGATACCTGCACCGCTGTTTTTCGGCATATGAATTTCTTCATAGTGGTCAGGCTTTTTATACGCTTCGCCTTTCTCTTTCATTTCCCAGAATGCATCACGTTCGTGAACGTGCGGCACTACGGCAAAGTTATAGAACGGAGGCGGGGAAGAGGTTGCCCACTCCAGCGTACGGCCACCCCACGGGTCGCCAGTCAGGTCACGGTTCTGGTCGCGGTCGCGAATAGAAACGTACATCTGAATAACGAGGCAGAG > NC_000913/448817‑449114 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |