Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 464,354 C→A 6.3% intergenic (+46/‑48) ybaV → / → fadM putative competence‑suppressing periplasmic helix‑hairpin‑helix DNA‑binding protein/long‑chain acyl‑CoA thioesterase III

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913464,3540CA 6.3% 322.3 / 5.6 106intergenic (+46/‑48)ybaV/fadMputative competence‑suppressing periplasmic helix‑hairpin‑helix DNA‑binding protein/long‑chain acyl‑CoA thioesterase III
Reads supporting (aligned to +/- strand):  ref base C (54/45);  new base A (4/3);  total (58/48)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 110 total aligned reads displayed.

ATCGCGAAGAGTACGGTCCGTTTAAAACTGTGGAGGATCTAAAGCAGGTGCCGGGGATGGGCAATTCGCTGGTGGAACGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAGTTCGTGGATATCATCTCGACGTTTACCAGCACGTCAACAACGCCCGCTACCTTGAATTTCTCGAAGAAGCCCGCTGGGATGGG  >  NC_000913/464205‑464503
                                                                                                                                                      |                                                                                                                                                     
aTCGCGAAGAGTACGGTCCGTTTAAAACTGTGGAGTCTCTAAAGCAGGTGCCGGGGATGGGCAATTCGCTGGTGGATCGTATTCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TATTTTGCCTGACTGAAGAGGTCATAc                                                                                                                                                       >  1:261625/1‑150 (MQ=255)
  cgcgAAGAGTACGGTCCGTTTAAAACTGTGGAGGATCTAAAGCAGGTGCCGGGGATGGGCAATTCGCTGGTGGAACGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCa                                                                                                                                                     <  1:767393/150‑1 (MQ=255)
       agagTACGGTCCGTTTAAAACTGTGGAGGATCTAAAGCAGGTGCCGGGGATGGGCAATTCGCTGGTGGAACGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTAt                                                                                                                                                >  1:534012/1‑150 (MQ=255)
          gTACGGTCCGTTTAAAACTGTGGAGGATCTAAAGCAGGTGCCGGGGATCGGCAATTCGCAGGTGGAACGTAAACTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGAc                                                                                                                                             >  1:20889/1‑150 (MQ=255)
           tACGGTCCGTTTAAAACTGTGGAGGATCTAAAGCAGGTGCCGGGGATGGGCAATTCGCTGGTGGAACGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGAcc                                                                                                                                            >  2:1506730/1‑150 (MQ=255)
           tACGGGCCGTTTAACCCTGTGGAGGATCTACAGCAGGTGCCGGGGATGGGCAATTCGCTGGGGGAACGTAATCTGGCGGTAGTTACCCTGTAATTAATTTGCCTAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGAcc                                                                                                                                            <  1:97486/150‑1 (MQ=255)
            aCGGTCCGTTTAAAACTGTGGAGGATCTAAAGCAGGTGCCGGGGATGGGCAATTCGCTGGTGGAACGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATAACTGGTATGACct                                                                                                                                           <  2:1112988/150‑1 (MQ=255)
                tacGTTTAAAACTGTGGAGGATCTAAAGCAGGTGCCGGTGATGGGCAATTCGCTGGTGGAACGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAATAGGTCATAACTGGTATGACctcttc                                                                                                                                       <  2:159586/148‑3 (MQ=255)
                 ccGTTTAAAACTGTGGAGGATCTAAAGCAGGTGACGGGGATGGGCAATTCGCTGGTGGAACGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTa                                                                                                                                      >  1:603756/1‑150 (MQ=255)
                  cGTTTAAAACTGTGGAGGATCTAAAGCAGGTGCCGGGGATGGGCAATTCGCTGGTGGAACGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTAc                                                                                                                                     <  1:1336702/150‑1 (MQ=255)
                  cGTTTAAAACTGTGGAGGATCTAAAGCAGGTGCCGGGGATGGGCAATTCGCTGGTGGAACGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTAc                                                                                                                                     <  1:978122/150‑1 (MQ=255)
                  cGTTTAAAACTGTGGAGGATCTAAAGCAGGTGCCGGGGATGGGCAATTCGCTGGTGGAACGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTAc                                                                                                                                     <  1:467929/150‑1 (MQ=255)
                   gTTTAAAACTGTGGAGGATCTAAAGCAGGTGCCGGGGATGGGCAATTCGCTGGTGGAACGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACt                                                                                                                                    >  1:348869/1‑150 (MQ=255)
                   gTTTAAAACTGTGGAGGATCTAAAGCAGGTGCCGGGGATGGGCAATTCGCTGGTGGAACGTAATCTGGCGGTATTAACCCTGTAATTAATTAGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACt                                                                                                                                    >  1:892756/1‑150 (MQ=255)
                     ttAAAACTGTGGAGGATCTAAAGCAGGTGCCGGGGATGGGCAATTCGCTGGTGGAACGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTta                                                                                                                                  <  2:1384046/150‑1 (MQ=255)
                      tAAAACTGTGGAGGATCTAAAGCAGGTGCCGGGGATGGGCAATTCGCTGGTGGAACGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTtat                                                                                                                                 <  1:513571/150‑1 (MQ=255)
                       aaaaCTGTGGAGGATCTAAAGCAGGTGCCGGGGATGGGCAATTCGCTGGTGGAACGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTtata                                                                                                                                >  2:1068372/1‑150 (MQ=255)
                       aaaaCTGTGGAGGATCTAAAGCAGGTGCCGGGGATGGGCAATTCGCTGGTGGAACGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTtata                                                                                                                                <  1:546654/150‑1 (MQ=255)
                           cTGTGGAGGATCTAAAGCAGGTGCCGGGGATGGGCAATTCGCTGGTGGAACGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACTAGTTATGACCTCTGTACTTATaacaa                                                                                                                            >  2:721591/1‑150 (MQ=255)
                           cTGTGGAGGATCTAAAGCAGGTGCCGGGGATGGGCAATTCGCTGGTGGAACGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATaacaa                                                                                                                            >  1:1538778/1‑150 (MQ=255)
                           cTGTGGAGGATCTAAAGCAGGTGCCGGGGATGGGCAATTCGCTGGTGGAACGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATaacaa                                                                                                                            >  1:1275989/1‑150 (MQ=255)
                               ggaggaTCTAAAGCAGGTGCCGGGGATGGGCAATTCGCTGGTGGAACGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATaacaacaac                                                                                                                        >  1:1259235/1‑150 (MQ=255)
                               ggaggaTCTAAAGCAGGTGCCGGGGATGGGCAATTCGCTGGTGGAACGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATaacaacaac                                                                                                                        >  1:540821/1‑150 (MQ=255)
                               ggaggaTCTAAAGCAGGTGCCGGGGATGGGCAATTCGCTGGTGGAACGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATaacaaacac                                                                                                                        >  2:1335190/1‑146 (MQ=255)
                                  ggaTCTAAAGCAGGTGCCGGGGATGGGCAATTCGCTGGTGGAACGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTa                                                                                                                     <  2:1574143/150‑1 (MQ=255)
                                    aTCTAAAGCAGGTGCCGGGGATGGGCAATTCGCTGGTGGAACGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAg                                                                                                                   >  2:1289266/1‑150 (MQ=255)
                                     tCTAAAGCAGGTGCCGGGGATGGGCAATTCGCTGGTGGAACGTAATCTGGAGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAgg                                                                                                                  >  1:1172131/1‑150 (MQ=255)
                                         aaGCAGGTGCCGGGGATGGGAAATTCGCTGGTGGAACGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTAt                                                                                                              <  2:1499443/150‑1 (MQ=255)
                                          aGCAGGTGCCGGGGATGGGCAATTCGCTGGTGGAACGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTAtt                                                                                                             >  2:1358787/1‑150 (MQ=255)
                                          aGCAGGTGCCGGGGATGGGCAATTCGCTGGTGGAACGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTAtt                                                                                                             >  1:1097319/1‑150 (MQ=255)
                                           gCAGGTGCCGGGGATGGGCAATTCGCTGGTGGAACGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTg                                                                                                            >  1:1566026/1‑150 (MQ=255)
                                           gCAGGTGCCGGGGATGGGCAATTCGCTGGTGGAACGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTg                                                                                                            <  2:1669078/150‑1 (MQ=255)
                                           gCAGGTGCCGGGGATGGGCAATTCGCTGGTGGAACGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTg                                                                                                            <  2:577776/150‑1 (MQ=255)
                                            cAGGTGCCGGGGATGGGCAATTCGCTGGTGGAACGTAATCTGGCGGTATTAACCCTGTATTTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACTACGTAAGGTTATTgc                                                                                                           <  2:1104943/150‑1 (MQ=255)
                                               gTGCCGGGGATGGGCAATTCGCTGGTGGAACGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCt                                                                                                        >  1:888424/1‑150 (MQ=255)
                                                 gCCGGGGATGGGCAATTCGCTGGTGGAACGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTAt                                                                                                      >  1:753529/1‑150 (MQ=255)
                                                 gCCGGGGATGGGCAATTCGCTGGTGGAACGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTAt                                                                                                      <  2:1352107/150‑1 (MQ=255)
                                                  ccGGGGAGGGGCAATTCGCTGGTGGAACGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATg                                                                                                     <  1:1514119/150‑1 (MQ=255)
                                                   cGGGGATGGGCAATTCGCTGGTGGAACGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGc                                                                                                    >  2:1451537/1‑150 (MQ=255)
                                                    ggggATGGGCAATTCGCTGGTGGAACGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCa                                                                                                   >  1:1050200/1‑150 (MQ=255)
                                                     gggATGGGCAATTCGCTGGTGGAACGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCaa                                                                                                  <  2:1482886/150‑1 (MQ=255)
                                                       gATGGGCAATTCGCTGGTGGAACGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAac                                                                                                <  1:1015760/150‑1 (MQ=255)
                                                       gATGGGCAATTCGCTGGTGGAACGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAac                                                                                                <  1:473774/150‑1 (MQ=255)
                                                        aTGGGCAATTCGCTGGTGGAACGTACTCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TATTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAaca                                                                                               <  1:99747/150‑1 (MQ=255)
                                                         tGGGCAATTCGCTGGTGGAACGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAacac                                                                                              >  1:74395/1‑150 (MQ=255)
                                                            gCAATTCGCTGGTGGAACGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACaaa                                                                                           >  1:770209/1‑150 (MQ=255)
                                                                  cGCTGGTGGAAAGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAg                                                                                     <  2:360225/150‑1 (MQ=255)
                                                                    cTGGTGGAACGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAGtt                                                                                   <  1:489369/150‑1 (MQ=255)
                                                                      ggtggAACGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGCCTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAGTTCg                                                                                 >  1:732427/1‑150 (MQ=255)
                                                                       gtggAACGTAATCTGGCGGTATTAACCCTCTAATTAATTTGCATAGTGGCAA‑ATTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAGTTAGt                                                                                >  1:1683870/1‑150 (MQ=255)
                                                                       gtggAACGGAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACTTAAGTTTATTGCGCTATGCAAACACAAATCAAAGTTCga                                                                                >  1:101273/1‑149 (MQ=255)
                                                                        tggAACGTAATCTGGCGGTATAAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAGTTCGTg                                                                               <  1:689899/150‑1 (MQ=255)
                                                                         ggAACGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATGACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAGTTAGTgt                                                                              >  1:303196/1‑149 (MQ=255)
                                                                         ggAACGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAGTTCGTgg                                                                              >  2:769816/1‑150 (MQ=255)
                                                                         ggAACGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAGTTCGTgg                                                                              >  2:1232305/1‑150 (MQ=255)
                                                                          gAACGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAGTTCGTGGa                                                                             <  2:553658/150‑1 (MQ=255)
                                                                          gAACGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAGTTCGTGGa                                                                             <  2:624200/150‑1 (MQ=255)
                                                                            aCGTAATCTGGCGGTATTACCCCTGTAATTAATTTGCATTGTGGCAA‑TTTTTTGCCAGACTGAAGTGGTCATACCAGTTATGTCCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAGTTCGTGGata                                                                           <  1:1228693/150‑1 (MQ=255)
                                                                               tAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAGTTCGTGGATatca                                                                        <  1:545557/150‑1 (MQ=255)
                                                                                aaTCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACAGAATTCAAAGTTCGTGGATatcat                                                                       >  2:1234224/1‑150 (MQ=255)
                                                                                 aTCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAGTTCGTGGATatcatc                                                                      >  2:222479/1‑150 (MQ=255)
                                                                                   cTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAGTTCGTGGATATCAtctc                                                                    <  2:1120707/150‑1 (MQ=255)
                                                                                   cTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAGTTCGTGGATATCAtctc                                                                    >  2:469271/1‑150 (MQ=255)
                                                                                   cTGGCGGTATTAAACCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTTCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAGTTCGTGGATATCAtctc                                                                    <  1:1436237/150‑1 (MQ=255)
                                                                                    tGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAGTTCGTGGATATCATCTCg                                                                   >  1:110096/1‑150 (MQ=255)
                                                                                       gggTATTTACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCAAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAGTTCGTGGATATCATCTCGACg                                                                <  2:261625/149‑1 (MQ=255)
                                                                                        ggTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAGTTCGTGGATATCATCTCGACGt                                                               <  2:1605775/150‑1 (MQ=255)
                                                                                         gTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAGTTCGTGGATATCATCTCGACGtt                                                              <  1:1500709/150‑1 (MQ=255)
                                                                                          tATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAGTTCGTGGATATCATCTCGACGttt                                                             >  2:1499959/1‑150 (MQ=255)
                                                                                              aaCCCTGTAATTAATTTGCATAGTGGCAATTTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAGTTCGTGGATATCATCTCGACGTTTAcc                                                          >  2:1731653/1‑150 (MQ=255)
                                                                                              aaCCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAGTTCGTGGATATCATCTCGACGTTTACCa                                                         <  2:275320/150‑1 (MQ=255)
                                                                                                 ccTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAGTTCGTGGATATCATCTCGACGTTTACCAGCa                                                      <  2:1721579/150‑1 (MQ=255)
                                                                                                   tGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAGTTCGTGGATATCATCTCGACGTTTACCAGCACg                                                    <  2:619170/150‑1 (MQ=255)
                                                                                                     taattaatTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAGTTCGTGGATATCATCTCGACGTTTACCAGCACGTc                                                  <  1:717860/150‑1 (MQ=255)
                                                                                                       attaattTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACATCTGTACTTATAACAACAACGTAAGGTTATTGCGATATGCAATCACAAATAAAAGTTCGTGGATATCATCTAGCCGTTTACCAGCAAGTcaa                                                >  2:1119941/1‑150 (MQ=255)
                                                                                                               gCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAGTTCGTGGATATCATCTCGACGTTTACCAGCACGTCAACAACGccc                                        <  2:770209/150‑1 (MQ=255)
                                                                                                                  tAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAGTTCGTGGATATCATCTCGACGTTTACCAGCACGTCAACAACGCCCGCt                                     >  1:250377/1‑150 (MQ=255)
                                                                                                                      ggCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAGTTCGTGGATATCATCTCGACGTTTACCAGCACGTCAACAACGCCCGCTACCt                                 >  1:98998/1‑150 (MQ=255)
                                                                                                                       gCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAGTTCGTGGATATCATCTCGACGTTTACCAGCACGTCAACAACGCCCGCTACCtt                                <  2:250377/150‑1 (MQ=255)
                                                                                                                       gCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAGTTCGTGGATATCATCTCGACGTTTACCAGCACGTCAACAACGCCCGCTACCtt                                >  2:402992/1‑150 (MQ=255)
                                                                                                                        cAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAGTTCGTGGATATCATCTCGACGTTTACCAGCACGTCAACAACGCCCGCTACCTTg                               <  1:386498/150‑1 (MQ=255)
                                                                                                                             tttttGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAGTTCGTGGATATCATCTCGACGTTTACCAGCACGTCAACAACGCCCGCTACCTTGAAtt                           >  1:1271938/1‑150 (MQ=255)
                                                                                                                                ttGCCAGACTGAAGAGGTCATTCCAGTTATGACCTCTGTACTTATAACAACAACGTAATGTTATTGCGCTATGCAAACACAAATCAAAGTTCGTGGATATCATCTCGACGTTTACCAGCACGTCAACAACGCCCGCTACCTTGAATTtct                        <  1:1100614/150‑1 (MQ=255)
                                                                                                                                 tGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAGTTCGTGGATATCATCTCGACGTTTACCAGCACGTCAACAACGCCCTCTACCTTGAATTtctc                       >  1:1720928/1‑150 (MQ=255)
                                                                                                                                 tGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAGTTCGTGGATATCATCTCGACGTTTACCAGCACGTCAACAACGCCCGCTACCTTGAATTtctc                       <  1:411415/150‑1 (MQ=255)
                                                                                                                                    cAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAGTTCGTGGATATCATCTCGACGTTTACCAGCACGTCAACAACGCCCGCTACCTTGAATTTCTCgaa                    >  2:1644660/1‑150 (MQ=255)
                                                                                                                                      taCTGAAGAGGTCATAACAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAGTTCGTGGATATCATCTCGACGTTTACCAGCACGTCAACAACGCCCGCTACCTTGAATTTCTCgaaga                  <  1:1035438/149‑1 (MQ=255)
                                                                                                                                        gtacagagGTCATAACTGGTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAGTTCGTGGATATCATCTCGACGTTTACCAGCACGTCAACAACGCCAGCTACCTTGAATTTCTCGaagaag                >  1:1168128/5‑150 (MQ=255)
                                                                                                                                        gtacagagGTCATAACTGGTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAAAACAAATCAAAGTTCGTGGATATCATCTCGACGTTTAACAGCACGTCAACAACGCCCGCTACCTTGAATTTCTCGaagaag                >  1:1162121/5‑150 (MQ=255)
                                                                                                                                        cTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAGTTCGTGGATATCATCTCGACGTTTACCAGCACGTCAACAACGCCCGCTACCTTGAATTTCTCGaagaag                >  1:867758/1‑150 (MQ=255)
                                                                                                                                           cagagGTCATAACTGGTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAGTTCGTGGATATCATCTCGACGTTTACCAGCACGTCAACAACGCCCGCTACCTTGAATTTCTCGAAGAAGccc             >  2:1445082/2‑150 (MQ=255)
                                                                                                                                             gagGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAGTTCGTGGATATCATCTCGACGTTTACCAGCACGTCAACAACGCCCGCTACCTTGAATTTCTCGAAGAAGCCCGc           <  2:534012/150‑1 (MQ=255)
                                                                                                                                             gagGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAGTTCGTGGATATCATCTCGACGTTTACCAGCACGTCAACAACGCCCGCTACCTTGAATTTCTCGAAGAAGCCCGc           >  2:655863/1‑150 (MQ=255)
                                                                                                                                             gagGTCATAACTGGTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAGTTCGTGGATATCATCTCGACGTTTACCAGCACGTCAACAACGCCCGCTACCTTGAATTTCTCGAAGAAGCCCGc           >  2:1356396/1‑150 (MQ=255)
                                                                                                                                               tgTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAGTTCGTGGATATCATCTCGACGTTTACCAGCACGTCAACAACGCCCGCTACCTTGAATTTCTCGAAGAAGCCCGCTg         >  1:838864/2‑150 (MQ=255)
                                                                                                                                                  cATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAGTTCGTGGATATCATCTCGACGTTTACCAGCACGTCAACAACGCCCGCTACCTTGAATTTCTCGAAGAAGCCCGCTGGGa      <  2:732427/150‑1 (MQ=255)
                                                                                                                                                   aTACCAGTTATGACCTCTGTACTTATAACAACCACGGAAGGTTATTGCGCTATGCAAACACAAATCAAAGTTCGTGGATATCATCTCGACGTTTACCAGCACGTCAACAACGCCCGCTACCTTGCATTTCTCGAAGAAGCCCGCTGGGAt     >  2:1491398/1‑150 (MQ=255)
                                                                                                                                                      ccAGTTATGACCTCTGTACTTATAACAACAACGTTAGGTTATTGAGCTAAGCAAACACAAATCAAAGTTCGTGGATATCATCTCGACGTTTACCAGCACGTCAACAACGCCCGCTACCTTGAATTTCTCGAAGAAGCCCGCTGGGATtgg  <  2:603756/150‑1 (MQ=255)
                                                                                                                                                      ccAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAGTTCGTGGATATCATCTCGACGTTTACCAGCACGTCAACAACGCCCGCTACCTTGAATTTCTCGAAGAAGCCCGCTGGGATggg  <  2:1172131/150‑1 (MQ=255)
                                                                                                                                                      ccAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAGTTCGTGGATATCATCTCGACGTTTACCAGCACGTCAACAACGCCCGCTACCTTGAATTTCTCGAAGAAGCCCGCTGGGATggg  >  1:1646153/1‑150 (MQ=255)
                                                                                                                                                      |                                                                                                                                                     
ATCGCGAAGAGTACGGTCCGTTTAAAACTGTGGAGGATCTAAAGCAGGTGCCGGGGATGGGCAATTCGCTGGTGGAACGTAATCTGGCGGTATTAACCCTGTAATTAATTTGCATAGTGGCAA‑TTTTTTGCCAGACTGAAGAGGTCATACCAGTTATGACCTCTGTACTTATAACAACAACGTAAGGTTATTGCGCTATGCAAACACAAATCAAAGTTCGTGGATATCATCTCGACGTTTACCAGCACGTCAACAACGCCCGCTACCTTGAATTTCTCGAAGAAGCCCGCTGGGATGGG  >  NC_000913/464205‑464503

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑