| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,648,362 | A→G | 5.4% | noncoding (69/84 nt) | agrB → | antisense sRNA antitoxin for the DinQ toxin |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,648,362 | 0 | A | G | 5.4% | 449.0 / 11.0 | 149 | noncoding (69/84 nt) | agrB | antisense sRNA antitoxin for the DinQ toxin |
| Reads supporting (aligned to +/- strand): ref base A (79/61); new base G (4/4); total (83/66) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.31e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.21e-01 | |||||||||||
Only 100 of 153 total aligned reads displayed.
TATACCGAAGTGCTCCCTCCGCCAGCTGAAGAAATCGCTAATTCTTGCAATGTTAGCCACTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCTTCCTCTGCACTTACACATTCGTTAAGTCATATATGTTTTTGACTTATCCGCTTCGAAGAGAGACACTACCTGCA > NC_000913/3648214‑3648510 | tataCCGAAGTGCTCCCTCCGCCAGCTGAAGAAATCGCTAATTCTTGCAATGTTAGCCACTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCaaa > 1:719684/1‑150 (MQ=255) aCCGAAGTGCTCCCTCCGCCAGCTGAAGAAATCGCTAATTCTTGCAATGTTAGCCACTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAACCCGCCGCaagggg > 1:553199/1‑146 (MQ=255) aCCGAAGTGCTCCCTCCGCCAGCTGAAGAAATCGCTAATTCTTGCAATGTTAGCCACTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTc > 1:1705265/1‑150 (MQ=255) aCCGAAGTGCTCCCTCCGCCAGCTGAAGAAATCGCTAATTCTTGCAATGTTAGCCACTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTc > 2:1354556/1‑150 (MQ=255) gCTCCCTCCGCCAGCTGAAGAAATCGCTAATTCTTGCAATGTTAGCCACTGGCTAATAGTATTGAGCTGTTAGATAATAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑tttttt < 1:477191/150‑1 (MQ=255) gCTCCCTCCGCCAGCTGAAGAAATCGCTAATTCTTGCAATGTTAGCCACTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACTTTGCGTCGG‑tttttt < 1:602636/150‑1 (MQ=38) gCTCCCTCCGCCAGCTGAAGAAATCGCTAATTCTTGCAATGTTAGCCACTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑tttttt > 2:410738/1‑150 (MQ=255) gCTCCCTCCGCCAGCTGAAGAAATCGCTAATTCTTGCAATGTTAGCCACTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑tttttt > 2:1596268/1‑150 (MQ=255) tccctccGCCAGCTGAAGAAATCGCTAATTCTTGCAATGTTAGCCACTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAAACCGACTTTGCGTCGG‑tttttta < 1:1509267/150‑2 (MQ=38) ccctccGCCAGCTGAAGAAATCGCTAATTCTTGCAATGTTAGCCACTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTAc > 2:323148/1‑150 (MQ=255) cctccGCCAGCTGAAGAAATCGCTAATTCTTGCAATGTTAGCCACTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGCCTGGAAAGT‑ATAAAACCGACGCAAAGTCGG‑TTTTTTTACg < 1:1352635/150‑1 (MQ=255) ccGCCAGCTGAAGAAATCGCTAATTCTTGCAATGTTAGCCACTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTa > 2:1650537/1‑145 (MQ=255) cGCCAGCTGAAGAAATCGCTAATTCTTGCAATGTTAGCCACTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGCCGCAAAGTCGG‑TTTTTTTACGTCCt < 1:989401/150‑1 (MQ=255) cGCCAGCTGAAGAAATCGCTAATTCTTGCAATGTTAGCCACTGGAAAATAGTATTGATCTGTTAGATAAGAACACTCTCACTCCAGCCAGAGCCACCAACCCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCt < 1:765699/150‑1 (MQ=37) aGCTGAAGAAATCGCTAATTCTTGCAATGTTAGCCACTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGAtt > 2:620562/1‑150 (MQ=255) cTGAAGAAATCGCTAATTCTTGCAATGTTAGCCACTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCa > 2:1428515/1‑150 (MQ=255) gaagaaATCGCTAATTCTTGCAATGTTAGCCACTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGa > 1:1256655/1‑150 (MQ=255) agaaATCGCTAATTCTTGCAATGTTAGCCACTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGCCGCAAAGTCGG‑TTTTTTTACGTCAAGATTCAGAcc > 2:1609355/1‑150 (MQ=255) gCTAATTCTTGCAATGTTAGCCACTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGATCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTc < 1:955547/150‑1 (MQ=255) gCTAATTCTTGCAATGTTAGCCACTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTc < 1:1686944/150‑1 (MQ=255) cTAATTCTTGCAATGTTAGCCACTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCa < 1:341463/150‑1 (MQ=255) aaaTTCTTGCAATGTTAGCCACTGGCTAATAGTATTGAGCTGTTAGATAAGAAATCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCaa < 1:895982/149‑1 (MQ=255) aaTTCTTGCAATGTTAGCCACTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCaaa > 1:1037729/1‑150 (MQ=255) atccTTGCAATCTTAGCCCCAGGCTAATAGTATTGAGCCGTTAGATAAGACCTCTCTCACTCCAGCCAGATCCACCAACTCAGGGCCGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAAt < 1:1732497/147‑1 (MQ=25) cTTGCAATGTTAGCCACTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGaa > 2:749078/1‑150 (MQ=255) ttGCAATGTTAGCCACTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAAt > 1:142172/1‑150 (MQ=255) tGCAATGTTAGCCACTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACTCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATa > 1:24147/1‑150 (MQ=255) tactattAGCCAGTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACTGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGc > 1:1201943/6‑150 (MQ=255) cAATGTTAGCCACTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGc > 2:738388/1‑150 (MQ=255) actattAGCCAGTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGcc > 2:157778/5‑150 (MQ=255) actattAGCCAGTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATACAGACCTCCTTTCAAATGAATAGcc > 1:32725/5‑150 (MQ=255) aaTGTTACCCACTGCCTAATAGTATTGCGCTGTACTATAATAACTATATCACTCCAGCCACAGCCACCACCTCAGGGATGGAATGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTAGTTCCTGATTCAGACCTCATTTCAAATGAATAccc < 2:1630686/150‑1 (MQ=18) aTGTTAGCCACTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑GTTTTTTACGTCCTGATTCAGACCTCCTATCAAATGAATAGCCa > 1:3751/1‑150 (MQ=255) gTTAGCCACTGGCTATTAGTTTTGAGCTGTTAGATAAGAAGTCTCTCACTCCAGACAGAGCCACCAACTCATGTCTTTTAAGT‑AAAAAACCGACGCATAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAAc < 1:510449/150‑1 (MQ=255) gTTAGCCACTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAAc < 1:539112/150‑1 (MQ=255) tAGCCACTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTc > 1:1159206/1‑150 (MQ=255) aGCCACTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCCCCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCa > 1:343672/1‑150 (MQ=255) cTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAAtt > 1:1024044/1‑150 (MQ=255) ggCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTca > 1:1530801/1‑150 (MQ=255) ggCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTca > 2:346744/1‑150 (MQ=255) gCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTcac < 1:542371/150‑1 (MQ=255) aaTAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCAACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACAcc < 1:1446903/150‑1 (MQ=255) aGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTAt > 1:1632537/1‑150 (MQ=255) gTATTGATGTGTTAGATGATTGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTAtt < 2:168310/150‑1 (MQ=17) aTTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTAc < 1:496230/150‑1 (MQ=255) aTTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTAc > 1:809317/1‑150 (MQ=255) aTTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTAc > 2:1202579/1‑150 (MQ=255) gAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCtt > 1:1402073/1‑150 (MQ=255) gAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCtt > 2:1324514/1‑150 (MQ=255) aGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCTTc > 1:1590658/1‑150 (MQ=255) tGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACGAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCTTCctc > 2:205549/1‑150 (MQ=255) tGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCTTCctc > 1:499072/1‑150 (MQ=255) ttAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCTTCCTCTg < 2:1321235/150‑1 (MQ=255) aGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCTTCCTCTGCa > 2:44812/1‑150 (MQ=255) tAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCTTCCTCTGCACtt > 2:637726/1‑150 (MQ=255) tAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCTTCCTCTGCACtt < 2:767647/150‑1 (MQ=255) aaGAACTCTCTCACTCCAGCCAGAGCCACCAACTTAGGGCTGGATAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCTACTTAAAATTCACACCTATTACCTTCCTCTGCACTTa < 1:1158444/150‑1 (MQ=255) aaGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGCCCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCTTCCTCTGCACTTa > 2:871282/1‑150 (MQ=255) ctctctCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCACCTCAAACTTCCCACCTAGTACCTTCCTGTGCGCGTAGACAt > 1:301987/1‑150 (MQ=21) ctctctCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCTTCCTCTGCACTTACACAt > 1:373684/1‑150 (MQ=255) ctctcACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGCCCTCCGTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCTTCCTCTGCACTTACCCATTc > 1:1121064/1‑150 (MQ=255) ctctcACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCTTCCTCTGCTCTTACACAttt < 1:620562/150‑2 (MQ=255) tctcACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCTTCCTCTGCACTTACACATTCg < 1:1629222/150‑1 (MQ=255) tctcACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCTTCCTCTGCACTTACACATTCg > 2:689105/1‑150 (MQ=255) ctcACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCTTCCTCTGCACTTACACATTCGt > 2:1363135/1‑150 (MQ=255) cACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCTTCCTCTGCACTTACACATTCGTTa < 2:719684/150‑1 (MQ=255) cACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAAATCACACCTATTACCTTCCTCTGCACTGACACATTCGTTa > 2:86821/1‑150 (MQ=255) aCTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCGCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCTTCCTCTGCACTTACACATTCGTTaa > 1:1142867/1‑150 (MQ=255) gccagAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCTTCCTCTGCACTTACACATTCGTTAAGTCata > 1:719351/1‑150 (MQ=255) agagCCAACAACTCATGGCTGGAAAGT‑AAAAAACCGAATCAAATTCGGTTTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCTTCCTCTGCACTTACACATTCGTTAAGTCatata < 1:193051/150‑1 (MQ=255) ccaACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCTTCCTCTGCACTTACACATTCGTTAAGTCATATATGTTTTTg < 2:1715906/150‑1 (MQ=255) aataCTCAGGGCTGGAAAGT‑AAAAAACCGACGAAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCTTCCTCTGCACTTACACATTCGTTAAGTCATATATGTTTTTg < 1:318123/147‑1 (MQ=255) aaCTCAGGGCTGGAAAGT‑AAAAAACCGAGGCAAAGTCGG‑TTTTTTTACTTCCTGATTCAGACCTCCTTTCAAATTAATATCCAACTCAAAATTCACACCTATTACCTTCCTCTGCACTTACACATTCGTTAAGTCATATATGTTTTTGAc < 2:548150/150‑1 (MQ=255) aCTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCTTCCTCTGCACTTACACATTCGTTAAGTCATATATGTTTTTGACt < 2:300840/150‑1 (MQ=255) aCTCAGGGATGGAAAGT‑AAAAAACCGACTTTGCGTCGG‑TTTTTTTGCGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCTTCCTCTGCACTTACACATTCGTTAAGTCATATATGTTTTTGACt < 2:1081897/150‑1 (MQ=255) cAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCTTCCTCTGCACTTACACATTCGTTAAGTCATATATGTTTTTGAATTAt > 2:515887/1‑150 (MQ=255) cAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCATCCTCTGCACTTACACAATCGTTAAGTCATATATGTTTTTGACTTaa > 2:670647/1‑149 (MQ=255) gggCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCTTCCTCTGCACTTACACATTCGTTAAGTCATATATGTTTTTGACTTATcc > 2:422137/1‑150 (MQ=255) ggCTGGAAATT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCTTCCTCTGCACTTACACATTCGTTAAGTCATATATGTTTTTGACTTATCCg < 2:435664/150‑1 (MQ=255) ggCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCTTCCTCTGCACTTACACATTCGTTAAGTCTTATATGTTTTTGACTTATCCg > 1:1609463/1‑150 (MQ=255) cTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCTTCCTCTGCTCTTACACATTCGTTAAGTCATATATGTTTTTGACTTATACGCt > 2:1091542/1‑150 (MQ=255) cTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCTTCCTCTGCACTTACACATTCGTTAAGTCATATATGTTTTTGACTTATCCGCt < 2:1158828/150‑1 (MQ=255) gAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCTTCCTCTGCACTTACACATTCGTTAAGTCATATATGTTTTTGACTTATCCGCTTCg < 1:1596268/150‑1 (MQ=255) gAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCTTCCTCTGCACTTACACATTCGTTAAGTCATATATGTTTTTGACTTATCCGCTTCg < 2:589529/150‑1 (MQ=255) gAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCTTCCTCTGCACTTACACATTCGTTAAGTCATATATGTTTTTGACTTATCCGCTTCg > 2:770587/1‑150 (MQ=255) gAAAGT‑AAAAAAACGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTACTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCTTCCTCTGCACTTACACATTCGTTAAGTCATATATGTTTTTGACTTATCCGCTTCg < 2:813279/150‑1 (MQ=255) cgtaaaaaaaCCGACTTTGCGTCGG‑‑TTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCTTCCTCTGCACTTACACATTCGTTAAGTCATATATGTTTTTGACTTATCCGCTTCGAag > 2:1423995/5‑150 (MQ=255) aGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCTTCCTCTGCACTTACACATTCGTTAAGTCATATATGTTTTTGACTTATCCGCTTCGAag < 1:1557285/150‑1 (MQ=255) aGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCTTCCTCTGCACTTACACATTCGTTAAGTCATATATGTTTTTGACTTATCCGCTTCGAag < 2:1463098/150‑1 (MQ=255) gtaaaaaaaCCGACTTTGCGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACGTTCCTCTGCACTTACACATTCGTTAAGTCATATATGTTTTTGACTTATCCGCTTCGaat > 2:1152644/4‑149 (MQ=255) taaaaaaaCCGACTTTGCGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCTTCCTCTGCACTTACACATTCGTTAAGTCATATATTTTTTTGACTTATCCGCTTCGAaga > 1:1610767/3‑150 (MQ=255) t‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCTTCCTCTGCACTTACACATTCGTTAAGTCATATATGTTTTTGACTTATCAGCTTCGAagag > 2:1668205/1‑150 (MQ=255) aaaaaCCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCTTCCTCTGCACTTACACATTCGTTAAGTCATATATGTTTTTGACTTATCCGCTTCGAagagag < 1:1202579/150‑1 (MQ=255) aaaaCCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCTTCCTCTGCACTTACACATTCGTTAAGTCATATATGTTTTTGACTTATCCGCTTCGAAgagaga > 2:1204390/1‑150 (MQ=255) aaCCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCTTCCTCTGCACTTACACATTCGTTAAGTCATATATGTTTTTGACTTATCCGCTTCGAAGAGAGaca < 2:1479846/150‑1 (MQ=255) ccGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCATTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCTTCCTCTGCACTTACACATTCGTTAAGTCATATATGTTTTTGACTTATCCGCTTCGAAGAGAGACACt < 2:553199/150‑1 (MQ=255) cGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCTTCCTCTGCACTTACACATTCGTTAAGTCATATATGTTTTTGACTTATCCGCTTCGAAGAGAGACACTa < 1:205549/150‑1 (MQ=255) gACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCTTCCTCTGCACTTACACATTCGTTAAGTCATATATGTTTTTGACTTATCCGCTTCGAAGAGAGACACTAc < 1:1431729/150‑1 (MQ=255) cGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGAACTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTAATACCTTCCACTGCACTTACACATTCGTTAAGTCATATATGTTTTTGACTTATCCGCTTCGAAGAGAGACACTACCt < 2:308388/150‑1 (MQ=255) aaaGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCTTCCTCTGCACTTACACATTCGTTAAGTCATATATGTTTTTGACTTATCCGCTTCGAAGAGAGACACTACCTGca < 1:44812/150‑1 (MQ=255) | TATACCGAAGTGCTCCCTCCGCCAGCTGAAGAAATCGCTAATTCTTGCAATGTTAGCCACTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTTACGTCCTGATTCAGACCTCCTTTCAAATGAATAGCCAACTCAAAATTCACACCTATTACCTTCCTCTGCACTTACACATTCGTTAAGTCATATATGTTTTTGACTTATCCGCTTCGAAGAGAGACACTACCTGCA > NC_000913/3648214‑3648510 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |