| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,781,051 | C→G | 5.9% | intergenic (+34/‑164) | lldD → / → trmL | L‑lactate dehydrogenase, FMN‑linked/tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,781,051 | 0 | C | G | 5.9% | 233.3 / 4.5 | 82 | intergenic (+34/‑164) | lldD/trmL | L‑lactate dehydrogenase, FMN‑linked/tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent |
| Reads supporting (aligned to +/- strand): ref base C (36/41); new base G (2/3); total (38/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.33e-01 | |||||||||||
ACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGA‑GGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGC > NC_000913/3780904‑3781200 | aCGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTGAg < 1:590716/150‑1 (MQ=255)aCGCTGACTGGCGCGAAATCGATCAGCGAAAATACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAg < 2:399568/150‑1 (MQ=255) tGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGgag < 1:756257/150‑1 (MQ=255) gACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGgaga > 1:922828/1‑150 (MQ=255) ccTGGCGCGAAAACGATCAGCGAAATTACGCTAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGaga‑g < 2:127687/149‑1 (MQ=255) tGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCGGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGGCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGA‑ggg < 2:808086/150‑1 (MQ=255) ggCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGTTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCCTAGGAGTTTGCGCCCCCTCACCCTAACCCTCTCCCTGAGGGAGA‑gggg > 2:291062/1‑150 (MQ=255) ggCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGA‑ggcg > 2:22703/1‑148 (MQ=255) cgcgAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCACCCTAACCCTCTCCCGCAGGGAGA‑GGGGAc > 2:1243213/1‑150 (MQ=255) gAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTGAGGGAGA‑gggttaggg < 1:1042834/150‑7 (MQ=255) aaaTCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGA‑GGGGACCGtt > 1:1140216/1‑150 (MQ=255) aaaTCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGA‑GGGGACCGtt > 2:102340/1‑150 (MQ=255) cGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCCCCCTAACCCTCTCCCTCAGGGAGA‑GGGGACCGTTCGgc > 2:1110024/1‑150 (MQ=255) cGATCAGCGAAATTACGCAAGATTCGCGGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGA‑GGGGACCGTTCGgc < 1:1127712/150‑1 (MQ=255) aTCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGGCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGA‑GGGGACCGTTCGgcgc < 1:102340/150‑1 (MQ=255) tCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATTGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGA‑GGGGACCGTTCGGCGCt < 1:956623/150‑1 (MQ=255) gAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCACCCCCTAACCCTCTCCCTCAGGGCGA‑GGGGACCGTTCGGCGCtgtatg > 2:293336/1‑150 (MQ=255) aTTACGCAAGATTCGCTGGTGCAGCGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGA‑GGGGACCGTTCGGCGCTGTATGTAc < 2:935531/150‑1 (MQ=255) cGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGG‑GGGGACCGGTCGGCGCTGGATGTACTccc > 1:49036/1‑150 (MQ=255) gCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGTGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGA‑GGGGACCGTTCg > 1:915669/1‑132 (MQ=255) gCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGTGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGA‑GGGGACCGTTCg < 2:915669/132‑1 (MQ=255) gCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCCCCCTAACCCTCTCCCTCAGGGAGA‑GGGGACCGTTCGGCGCAGTATGTACTCCCt > 1:1252285/1‑150 (MQ=255) cAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCACAGGGAGA‑GGGGACCGGTCGGCGCTGTATGTACTgccgc > 2:1651225/1‑148 (MQ=255) aGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGA‑GGGGACCGTTCGGCGCTGTATGTACTCCCTCAc < 1:547811/150‑1 (MQ=255) tCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGA‑GGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTg < 1:1633867/150‑1 (MQ=255) tCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGA‑GGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTg < 2:1349098/150‑1 (MQ=255) cGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGA‑GGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGa > 2:41033/1‑150 (MQ=255) cTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCACCCTCAGGGAGA‑GGGGACCGTTCGGCGCGGTATGTACTCCCGCACTCTGaaa > 2:329874/1‑150 (MQ=255) tGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGTCGAAAGGGAATGCGGCATAGGCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGA‑GGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAAc < 1:105842/150‑1 (MQ=255) tGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGA‑GGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAAc < 2:186891/150‑1 (MQ=255) ggTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGA‑GGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACg < 2:514886/150‑1 (MQ=255) ggggCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGA‑GGGGACCGTTCGGCGCTGTATGTACACCCTCACTCTGCAACGCCACCg > 2:317760/1‑150 (MQ=255) ggggCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCAAACCCTCACCCTCAGGGAGA‑GGGGACCGTTAGGCGCTGTATGTACTACCTCACTCTGAAACGACACCg > 2:744662/1‑150 (MQ=255) ggggCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCACCCAAAACCTCACCCGCAGGGGGA‑GGGGGCCGTTCGGGGCTGTATGTACTCCCTCCCTCTTAAACgcccccc > 2:1704495/1‑144 (MQ=255) gTAAAGCGGTGCCTGCGGCACTGGCGCCCATGGCGAAAGGGAATGCGGCATAGGCGTGTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGA‑GGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCttt < 1:1705572/150‑1 (MQ=255) aaGAGTTGCCTTCGGCACTGGCTACCATTGCTAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGA‑GGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTTAAACGACACCTCACTCtttttt < 1:987900/150‑1 (MQ=255) aaGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGA‑GGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCtttttt < 2:1001118/150‑1 (MQ=255) aaGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGA‑GGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCcttttt < 1:1446444/150‑1 (MQ=255) agagTTGCCTGCGGATCTTGCTCCCATTGATAAAGTGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCACCCTCAGGGAGA‑GGGGACCGTTCGGAGCTGTATGGACTCCCTCACTCTGAAACGACACCGCACTCttttttt < 2:170564/150‑1 (MQ=255) agTTGCCTGCGGCACTTGCTCCCAGGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCATGGAGA‑GGGGACCTTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTtct < 1:975397/150‑1 (MQ=255) gTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGA‑GGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTtctc < 1:1010026/150‑1 (MQ=255) ttGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGA‑GGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTcc < 1:18094/150‑1 (MQ=255) ttGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGA‑GGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTcc < 2:922828/150‑1 (MQ=255) gCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCGCAGGGAGA‑GGGGACCGTTCGGCGCTGTAAGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCAccca > 2:289878/1‑149 (MQ=255) cTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGA‑GGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCg < 1:1294798/150‑1 (MQ=255) tGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGACGTTTGCGCCCCCTCCCCCTAACCCTCTCCCTCAGGTAGA‑CGGTACCTATCGGCGCTGTATGTACTCCCACACAAATAAACGCCACCGCACTCTTTATTTCTCCCTCGc > 1:283824/1‑150 (MQ=255) gCTCCCATGGCGAAAGTGAATGAGGCATAGTAGTTTGCGCCCCCTCAACCTTACCCTCTCCCTCAGCGAGA‑GGGGACCGTTCGGCGCTGTATGTACTCCCTCTCTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCgggg < 2:280889/150‑1 (MQ=255) gCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGA‑GGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCgggg < 2:473541/150‑1 (MQ=255) cTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGA‑GGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGga < 1:249584/150‑1 (MQ=255) cccATGGCGAAAGGGAATGCGGCATAGTCGTTTTCGCCCCCTCCCCCTAACCCACTCCCTCAGGGAGA‑GGGGACCGTTCGGCGCTGTATTTACTACATCAATATGAAACGACACCGCCCACATTTTTTATACCACGCCCCTCCGGGgaga > 2:948254/1‑150 (MQ=255) cccATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGA‑GGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGgaga < 1:1136973/150‑1 (MQ=255) ccATGGCGAACGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGA‑GGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGagag < 2:735171/150‑1 (MQ=255) ccATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGA‑GGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGagag < 1:620065/150‑1 (MQ=255) aTGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGA‑GGGGACCGTTCGGCGCTGTACGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAggg < 2:1081238/150‑1 (MQ=255) ggCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGG‑GGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAgggag < 1:1607845/150‑3 (MQ=255) gCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGA‑GGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCg < 2:817015/150‑1 (MQ=255) cGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGA‑GGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCgg > 2:190091/1‑150 (MQ=255) cGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGA‑GGGGACCGGTCGGCGCGGGATGTACTCCCGCCCGCGGAAACGCCCCCGCCCGCGTTTTTTCGCCCGCGCCCCGCCGGGGGGGGGGGCgg > 1:1155639/1‑150 (MQ=255) cGAAAGGGAATGCGGCATAGGCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGA‑GGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCgg < 1:1211960/150‑1 (MQ=255) gAAAGCGAATGCGGCATAGACGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCCGGGAGA‑GGGGACCCTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCggg < 2:507334/150‑1 (MQ=255) aaGGGAATGCGGCATAGGCGTTTGCGCCCCCTCCCCCTAACCCTCTCCCTCAGGGAGA‑GGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGt < 1:642393/150‑1 (MQ=255) agcgAATGCGGCATAGTCGTTGGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGA‑GGGGACCGTTCGGCGCTCTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTg < 2:817707/147‑1 (MQ=255) acggAATGCCGCATAGTCGTTTGCCCCCCCACAACCAAAACCACAACCTCAGGGACA‑CGGGACCGTTAGGCGCTGTATGTACTCCCTCACGCTGAAACGACACCGCACTATTTTTTTCTCCCACCCCCCGCCGGGGAGAGGGCCGGGGTg > 2:692980/3‑150 (MQ=255) gAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGA‑GGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAgg < 1:771661/150‑1 (MQ=255) ttcgtaaTAGTCGTTTGAGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGA‑GGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGa < 2:1641994/144‑1 (MQ=255) tGCGGCATAGTCGTTTGCGCCCCCACCCCCAAACCCACGACCACAGGGAGA‑GGGGGCCGTTAGGCGCAGTATGTTCTCCCACACACGGAAACGACCCCCCCCACGTTTTTTATACCACCCCCCAACCGGGAGAGGGGCCGGGTGTggggg > 2:596144/1‑149 (MQ=255) ggCATAGGCGTGAGCGCCCCCTCACCCTAACCCTCTCCCTCCGGGAGA‑GGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGaaaa < 2:312372/150‑1 (MQ=255) gTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGA‑GGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACt > 2:1128062/1‑150 (MQ=255) gcCCCCTCACCCTAACCCTCTCCCTCAGGGAGA‑GGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACCCCGCACTCTTTTTTTCTCCCTCGCCCCGCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGcgccc > 2:664110/1‑146 (MQ=255) gcCCCCTCACCCTAACCCTCTCCCTCAGGGAGA‑GGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTAGCCCGCCCCCGGCGGGGGTGGGGGCGGGGGGGGGGGTAAAAGCCCCCCCTGcgccc > 2:13894/1‑146 (MQ=255) cTCACCCTAACCCTCTCCCTCAGGGAGACGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACCCCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGTGGAAAAGGACGCACTGCTCACCAAt > 1:663554/1‑150 (MQ=255) cccTAACCCTCTCCCTCAGGGAGA‑GGGGACCGTTCGGCGGTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCCCAGCTCCCGAATTTTCt > 1:1646719/1‑150 (MQ=255) cccTAACCCTCTCCCTCAGGGAGA‑GGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCGCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCt > 1:1353249/1‑150 (MQ=255) cccTAACCCTCTCCCTCAGGGAGA‑GGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTGTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCGCTGCTCACCAATTTTCt > 2:133635/1‑150 (MQ=255) ccTAACCCTCTCCCTCAGGGAGA‑GGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCTCTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCAGCAATTTTCTg > 1:545359/1‑150 (MQ=255) aaCCCTCTCCCTCAGGGAGA‑GGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTAACCAATTTTCTGCTa > 2:118322/1‑150 (MQ=255) cccTCTCCCTGAGGGAGA‑GGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGcc < 2:242303/88‑1 (MQ=255) cccTCTCCCTGAGGGAGA‑GGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGcc > 1:242303/1‑88 (MQ=255) ccTCTCCCTCAGGGAGA‑GGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATcc > 2:1480454/1‑150 (MQ=255) ctctCCCTCAGGGAGA‑GGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGCAACGCCCCCGCCGTCTTTTTTTCTCCCTCGCCCCGCCGGGGAGAGGGCCCGGCTGAGGGGACAAGGCCGCCGTGCTCTCCTATTTTCTGCTATCCt > 1:452807/1‑150 (MQ=255) cccTCAGGGAGA‑GGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGccc > 1:156131/1‑150 (MQ=255) cTCAGGGAGA‑GGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGccccc > 2:52972/1‑150 (MQ=255) cAGGGAGA‑GGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGc > 2:1343818/1‑150 (MQ=255) | ACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGA‑GGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGC > NC_000913/3780904‑3781200 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |