| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,908,506 | C→G | 8.1% | intergenic (‑140/+43) | pstB ← / ← pstA | phosphate ABC transporter ATPase/phosphate ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,908,506 | 0 | C | G | 8.1% | 278.1 / 11.1 | 95 | intergenic (‑140/+43) | pstB/pstA | phosphate ABC transporter ATPase/phosphate ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base C (38/49); new base G (3/5); total (41/54) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.64e-01 | |||||||||||
TACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTCCG > NC_000913/3908360‑3908655 | tACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTgg < 1:1328513/150‑1 (MQ=255)tACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTgg < 2:1478747/150‑1 (MQ=255) aCTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTggg < 2:127869/150‑1 (MQ=255) aCTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTggg < 2:1410223/150‑1 (MQ=255) cTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAAACAGGCTTACCGTAGGCCGGATCAGGCGATCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCACGGTCGGTCCCCTCGCCCCACTgggg > 1:388772/1‑150 (MQ=255) cTCATTGCAATCTTTTCCGCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGAGCAGGCGTGCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTgggg < 1:154471/150‑1 (MQ=255) cATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTAGGTCCACTCGCCCCTCTGGGgag > 2:412568/1‑150 (MQ=255) tGCATTCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCTCCCCAGAGGGGCGAgg < 2:1184828/150‑1 (MQ=39) tGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTACTCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAACGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAgg < 2:111049/150‑1 (MQ=255) tGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAgg < 2:1349317/150‑1 (MQ=255) tGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCACTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAgg < 2:385218/150‑1 (MQ=255) gCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAggg > 2:650074/1‑150 (MQ=255) cAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCTCCCCAGAGGGGCGAgggg < 1:571514/150‑2 (MQ=39) cAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGGCGGTCCCCTCTCCCCAGAGGGGCGAgggg < 1:1400068/150‑2 (MQ=39) aaTCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGTATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGtt < 2:871123/150‑1 (MQ=255) aaTCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGtt < 2:404832/150‑1 (MQ=255) tCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACCGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAg < 2:775096/150‑1 (MQ=255) cTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAgg < 1:1275190/150‑1 (MQ=255) cctcctCGTGCCTGATGCACTTCGCTAATCAGGCTTACGGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTCACCGTGTTCAGAGTCTAATAGGGGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAg < 1:14994/150‑1 (MQ=38) ccTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAg > 1:1021506/1‑150 (MQ=255) cATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAgggg > 1:34237/1‑150 (MQ=255) cATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAgggg > 1:884872/1‑150 (MQ=255) aTCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTTGGGTGAGGGGa > 2:792360/1‑150 (MQ=255) tCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGaa > 1:405238/1‑150 (MQ=255) aTGCACTTCGCTAATCAGGCTTACCGTAGGCCGGAGCCGGCGTTCACGCCGCATCGGGCAATGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGTTCCCCTCGCCCCTCTGGGGTGAGGGTTAGGGTGAGGGGAAAACCGTGTc < 1:1692992/150‑1 (MQ=39) tGCACTTCGCTAATCAGGCTTACCGTCGGCCGGATCCGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCGCGGTCGGGCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGTGGGGAAAACCGTGTCa < 1:437793/150‑1 (MQ=39) gCACTTCGCTAATCAGGCGTACCTTAGGCGGGATCTGGCGTTCAGGCCGCATCCGGCAAAGTGTTAACCGTGTTAAGTGTCAAAAAGGCGCGCGGGCGGCCCCCTCGCCCCTCTGGGGTTTGGGTTAGGGTGAGGGTAAAACCGTGTCAg < 1:1068570/150‑1 (MQ=255) ctcccTAATCCGGCTAACCGTAGGCCGGCTCCGGCGTTCACGCCGCACCCGGCAATGTGTTAACCGTGTACAGATTCAAAAAGGCGCTCGGTCGGGCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAat < 1:174862/146‑1 (MQ=37) tCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGGTAGGGGGA‑GGGAAAACCGTGTCAGCAatat > 2:399112/1‑150 (MQ=255) tCGCAAATCAGGCTTCCGGTAGGCCGGCTCTGGCGTTCACGCCGCATCCGGAAAAGTGTTAACCGTGTCCAGCGGCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGTGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAata < 2:1253523/150‑1 (MQ=37) cGCAAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTACCCGTGTACAGAGTCAAAAAGCCGCTCGGGCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAACAatat < 1:916789/150‑1 (MQ=38) aTCTGGCTTAGCGTAGGAGGGTTCAGGCGTTCACGCGGCTTCCGGCAAAGTGTTAACCGTGTACAGATTAAAAAAGGCGGTCGGTGGGTCCCCTCCCCCATCTGGGGAGTGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAAcc < 2:1423436/150‑1 (MQ=255) aTCAGGCTTACCTTAGGCGGGATCAGGCGTTCACGCCGCATCCGGCAATGTGTTAACCGTGTACAGACTCAAAAAGGCGCTGGGTCGTTCCCCTCGCCCCTCTGGGGAGTGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAAcc < 1:1614529/150‑1 (MQ=38) tccggCTTACCGTTGGCCGGATCTGCCGTTCCCGCCGCATCCGGCAAAGTGTTAACCGTGAACAGAGTCAAAATGGCGCTCGGGCGGTCCCCTCGCCCCTCGGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCg < 2:83845/147‑1 (MQ=38) ggCTTACCGTAGGCAGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCCAGTAAAGAGTCAAAAAGGCGCTCGGTCAGTCCCCTCGCCCCTCTCAAGAGAGGTTTAGTGTGAGGGGAAAACAGTGTCATCAATATCAACCttgt > 2:931532/1‑150 (MQ=255) gCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGtt > 1:889258/1‑150 (MQ=255) ttACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGTTATGTCGGTCCCCTCGCCACTCTGTGGAGATGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTa < 1:276093/150‑1 (MQ=39) aCCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTAtt > 1:83766/1‑150 (MQ=255) cggCGGGACCAGGCGTGCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGTGTCAAAACGCCGCGCGGTCGGCCCCCTCGCCCCGCGGGGGTGAGGGTTAGGGGGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCg < 1:553146/149‑1 (MQ=255) gCCGGATGCGGCGTGAACGCCTGATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAgg < 2:151654/96‑1 (MQ=37) gCCGGATGCGGCGTGAACGCCTGATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAgg > 1:151654/1‑96 (MQ=37) gCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCa > 1:1222189/1‑150 (MQ=255) gCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCa > 1:1603291/1‑150 (MQ=255) ccGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCaa < 2:256818/150‑1 (MQ=255) gggATCAGGCGTTAACGCCGCATCCGGAAAAGTGTTAACCGTGTAAAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTGGCCCCTCTGGGGTGAGGGTTTGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCaaa < 2:1404345/149‑1 (MQ=255) cGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAATGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCaaa < 2:167212/150‑1 (MQ=255) cGGATCAGGCGGTCTCGCCGAATCCGTCAAAGTGTTATCCGTGTACAGAGTCAAAAACGCGCGCGGTCGGTCCCCTCGCCCCTCTGGTGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCaaa < 2:274334/150‑1 (MQ=38) ggATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCaaaa > 1:852703/1‑150 (MQ=255) ggATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCaaaa > 1:475495/1‑150 (MQ=255) ttaaGGCGTTCACGCGGCATGCGGCAAAGTGTTAACGGTGTACAGATTCAAAAAGGCGCTCGGGCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGTGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAaac < 2:388772/147‑1 (MQ=38) aTCAGGGGTTCACGCCTCATCCGGCAAAGTGTTAACCGTGTAATGCGTCAAATAGCCGCGAGGGCGGCCCGCGCCCCCCTGTTGGTAGAGGGTTAGGGGGCGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAaac < 2:556376/150‑1 (MQ=255) ggCGTTCAGGCCGCATCCGGCAAAGTATTAACCGTGTACAGAGGCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAAcg < 2:251689/150‑1 (MQ=255) cGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTGCGCAACAACAAcgcg > 1:84253/1‑150 (MQ=255) cGTGCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGGCAAAAAGGCTCTCGGTCGGTCCCCTCGCCCCTCTGGGGTGAGGGTTTGGGTGAGGGGAAAACCGTGGCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAAcgcg < 2:319566/150‑1 (MQ=39) agTTCACGCCGCATCCGGCAAAGTGTTAACCGTTTACAGAGTCAAACAGGCGCGCGGGCGGTCCCCGCGCCCCTCGGGGGAGAGGGTTTGGGGGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAAcgcg < 2:314888/149‑1 (MQ=255) gtCACGCCGCATCCGGCAAAGTGGTAACCGGTTACAGAGTCAAAAAGGCGCGCGGGCGGTACCCTCGCCCCTCTGGGGAGAGGGTGAGGGGGAGGGGAAACCCGTGTCCGCACTATCAACCGTGGTTATTCTTCGCAAAAACAAcgcgcg < 2:262636/149‑1 (MQ=37) cACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGcc > 2:357581/1‑150 (MQ=255) cACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGcc > 1:656737/1‑150 (MQ=255) cgccgcATCCGGCAAAGTGTTAACCGTGTACAGATTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGAGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAg > 1:311218/1‑150 (MQ=255) cgccgcATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGGGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAg < 1:650074/150‑1 (MQ=255) aTCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGtt < 2:389333/150‑1 (MQ=255) tCCTGCTAAGTGTTAACCGTGTACTGAGTCAAAAAGGCGCTGGGGCGGGCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGATAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTc < 2:1064135/150‑1 (MQ=38) tCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTc > 2:1718228/1‑150 (MQ=255) cGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTcag > 2:379638/1‑150 (MQ=255) gCAAAGTGATAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTcagca < 1:53380/150‑1 (MQ=255) cAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTcagcag > 2:711/1‑150 (MQ=255) aaaGTTTTAACCGTGAACAGCGTCACAACGGCGCTCGGGGGGTCCCCGCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTATATTCTTCGCAAAAACAACGCGCGCCAGAATGTTcagcagc < 2:1067292/150‑1 (MQ=38) aGTGTTAACCGTGTACAGAGTCAAAACGGCGCTCGGGCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTTAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTcagcagcag < 2:1375506/150‑1 (MQ=255) aCCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTAGGcac > 1:821534/1‑150 (MQ=255) cGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCGTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGGGTTGATTCTTCGC‑AAACCAACGCGCGCCAGAATGTTCAGCCGCAGTACGCACAgg > 1:1150199/1‑150 (MQ=38) gtACAGAGTCAAACAGGCGCTCGGGCGGTCCCGTCGCCCCTCTGGGGCGAGGGTTAGGTTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGt < 2:1713777/150‑1 (MQ=255) aCAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCACAATGTTCAGCAGCAGTACGCACAGGGaaa > 2:1536262/1‑150 (MQ=255) agTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGAt > 1:171572/1‑150 (MQ=255) gTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACACCGCGCGCCAGAATGTTCAGCAGCAGTCCGCACAGGGTAATGATc > 2:1454675/1‑150 (MQ=255) gTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATc > 1:1313132/1‑150 (MQ=255) cAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCaa > 1:376704/1‑150 (MQ=255) aaaaaGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGCTccag > 1:304422/1‑147 (MQ=255) cggCGCTCGGTCGGGCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATAccc < 1:1238284/149‑1 (MQ=255) aGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATAccc > 2:226382/1‑150 (MQ=255) cTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGcc < 2:405238/150‑1 (MQ=255) tcggtcggTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGccc < 2:1148405/150‑1 (MQ=255) ggtcggtcCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAACAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTTATGTGCAATACCCCGGCCCAg > 2:263737/1‑150 (MQ=255) ggtcggtcCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAAGGATCAATACCCCGGCCCAg > 2:1440278/1‑150 (MQ=255) ggcggccCCCTCGCCCCTCTGGGGTGAGGGTTAGGGGGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAgg < 2:753678/148‑1 (MQ=255) ccctaacccTCTCCCCAGAGGGGCGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCa > 2:1283406/7‑134 (MQ=255) ccctaacccTCTCCCCAGAGGGGCGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCa < 1:1283406/128‑1 (MQ=255) ccctaacccTCTCCCCAGAGGGGCGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGc > 2:1291207/7‑150 (MQ=255) taacccTCTCCCCAGAGGGGCGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCaa > 1:879468/4‑150 (MQ=255) ccccTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTCCGCAAAAACAACGCGCGCCAGAATGTTCCGCAGCAGTACGCACAGGGTAAAGAGCACTACCCCGGCCCACGCCACtt > 2:1342511/1‑150 (MQ=38) acccTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAACCCGAGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACCGGGTAATGATCACTACCCCGGCCCAGGCCCAtt > 1:237555/2‑150 (MQ=39) cTCGCCCCTCTGGGGTGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATtgct > 1:361479/1‑150 (MQ=255) tCGCCCCTCTGGGGAGAGGGTTAGGGTTAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATtgctg < 1:1337682/150‑1 (MQ=255) tCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATtgctg < 2:34237/150‑1 (MQ=255) gcGCCCCTCGGGGGTGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATtgctg < 2:884872/149‑1 (MQ=255) cGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATtgctgc < 2:83766/150‑1 (MQ=255) ctctGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTc > 2:1596594/1‑150 (MQ=255) tctGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTcc > 1:694449/1‑150 (MQ=255) ctGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTCCg < 2:1313132/150‑1 (MQ=255) | TACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTCCG > NC_000913/3908360‑3908655 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |