| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,910,368 | G→C | 5.2% | P11A (CCG→GCG) | pstC ← | phosphate ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,910,368 | 0 | G | C | 5.2% | 392.2 / 7.4 | 125 | P11A (CCG→GCG) | pstC | phosphate ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base G (58/60); new base C (5/2); total (63/62) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.40e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.67e-01 | |||||||||||
Only 100 of 127 total aligned reads displayed.
TCCATAGGAAAGCCAGACCAAATTTCTGAATGCTCGGCCAGGAGGAGATGATCAGAGAGACAATAATGCCACCCAACATCAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAAT > NC_000913/3910224‑3910517 | tCCATAGGAAAGCCAGACCAAATTTCTGAATGCTCGGCCAGGAGGAGATGATCAGAGAGACAATAATGCCACCCAACATCAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGt < 1:1582977/150‑1 (MQ=255) ccATAGGAAAGCCAGACCAAATTTCTGAATGCTCGGCCAGGAGGAGATGATCAGAGAGACAATAATGCCACCCAACATCAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGtt > 2:1641217/1‑150 (MQ=255) ccATAGGAAAGCCAGACCAAATTTCTGAATGCTCGGCCAGGAGGAGATGATCAGAGAGACAATAATGCCACCCAACATCAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGtt < 2:56871/150‑1 (MQ=255) tAGGAAAGCCAGACCAAATTTCTGAATGCTCGGCCAGGAGGAGATGATCAGAGAGACAATAATGCCACCCAACATCAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTaaa > 1:1174577/1‑150 (MQ=255) ggAAAGCCAGACCAAATTTCTGAATGCTCGGCCAGGAGGAGATGATCAGAGAGACAATAATGCCACCCAACATCAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAg > 1:1451289/1‑150 (MQ=255) gAAAGCCAGACCAAATTTCTGAATGCTCGGCCAGGAGGAGATGATCAGAGAGACAATAATGCCACCCAACATCAATAGCACAATCAGCGCCGGCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTaaaatc > 1:279742/1‑148 (MQ=255) aGCCAGACCAAATTTCTGAATGCTCGGCCAGGAGGAGATGATCAGAGAGACAATAATGCCACCCAACATCAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAgg > 1:431374/1‑150 (MQ=255) aGCCAGACCAAATTTCTGAATGCTCGGCCAGGAGGAGATGATCAGAGAGACAATAATGCCACCCAACATCAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTAACCCACCGGGTAAAAAgggcg < 2:1192829/150‑5 (MQ=255) gCCAGACCAAATTTCTGAATGCTCGGCCAGGAGGAGATGATCAGAGAGACAATAATGCCACCCAACATCAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGc > 2:758660/1‑150 (MQ=255) gCCAGACCAAATTTCTGAATGCTCGGCCAGGAGGAGATGATCAGAGAGACAATAATGCCACCCAACATCAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGc < 1:1573904/150‑1 (MQ=255) cAGACCAAATTTCTGAATGCTCGGCCAGGAGGAGATGATCAGAGAGACAATAATGCCACCCAACATCAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCtt > 1:1195322/1‑150 (MQ=255) aGACCAAATTTCTGAATGCTCGGCCAGGAGGAGATGATCAGAGAGACAATAATGCCACCCAACCTCAATAGCACAATCAGAGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTg < 2:1042411/150‑1 (MQ=255) aGACCAAATTTCTGAATGCTCGGCCAGGAGGAGATGATCAGAGAGACAATAATGCCACCCAACATCAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTg > 1:1614321/1‑150 (MQ=255) aCCAAATTTCTGAATGCTCGGCCAGGAGGAGATGATCAGAGAGACAATAATGCCACCCAACATCAATATCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCTGTGGGTTAAAAGCAGGCTTGGt < 2:547692/150‑1 (MQ=255) aCCAAATTTCTGAATGCTCGGCCAGGAGGAGATGATCAGAGAGACAATAATGCCACCCAACATCAATAGCACAATCAGCGCCGCCAGGTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGt < 2:362634/150‑1 (MQ=255) cAAATTTCTGAATGCTCGGCCAGGAGGAGATGATCAGAGAGACAATAATGCCACCCAACATCAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTg < 2:716931/150‑1 (MQ=255) aaaTTTCTGAATGCTCGGCCAGGAGGAGATGATCAGAGAGACAATAATGCCACCCAACATCAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGc < 2:1262368/150‑1 (MQ=255) aaaTTTCTGAATGCTCGGCCAGGAGGAGATGATCAGAGAGACAATAATGCCACCCAACATCAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGGCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGc < 1:558826/150‑1 (MQ=255) tttCTGAATGCTCGGCCAGGAGGAGATGATCAGAGAGACAATAATGCCACCCAACATCAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGc < 2:1016671/150‑1 (MQ=255) ttCTGAATGCTCGGCCAGGAGGAGATGATCAGAGAGACAATAATGCCACCCAACATCAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGcc < 1:1550879/150‑1 (MQ=255) cTGAATGCTCGGCCAGGAGGAGATGATCAGAGAGACAATAATGCCACCCAACATCAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCAt > 2:570547/1‑150 (MQ=255) gAATGCTCGGCCAGGAGGAGATGATCAGAGAGACAATAATGCCACCCAACATCAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATaa < 1:1319775/150‑1 (MQ=255) aaTGCACGGCCAGGAGGAGATGATCAGAGAGACAATAATGCCACCCAACCTCAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAg < 2:100527/150‑1 (MQ=255) gCTAGGCCAGTAGGAGATGATCAGAGAGACAATAATGCCACCCAACATCAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTa < 1:1576748/150‑1 (MQ=255) cTCGGCCAGGAGGAGATGATCAGAGAGACAATAATGCCACCCAACATCAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTAc > 1:859657/1‑150 (MQ=255) tCGGCCAGGAGGAGATGATCAGAGAGACAATAATGCCACCCAACATCAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTAct < 2:378968/150‑1 (MQ=255) ggCCAGGAGGAGATGATCAGAGAGACAATAATGCCACCCAACATCAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGGTGCAGCCATATGTTActct > 2:100939/1‑150 (MQ=255) cgCCAGGAGGAGATGATCAGAGAGACAATAATGCCACCCAACATCAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTActct > 1:223237/2‑150 (MQ=255) gCCAGGAGGAGATGATCAGAGAGACAATAATGCCACCCAACATCAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAATTTACTCtt < 2:1125188/150‑1 (MQ=255) gCCAGGAGGAGATGATCAGAGAGACAATAATGCCACCCAACATCAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCtt > 1:191124/1‑150 (MQ=255) gCCAGGAGGAGATGATCAGAGAGACAATAATGCCACCCAACATCAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCtt > 2:1660802/1‑150 (MQ=255) aggaggAGATGATCAGAGAGACAATAATGCCACCCAACATCAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAg < 2:484900/150‑1 (MQ=255) aggaggAGATGATCAGAGAGACAATAATGCCACCCAACATCAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAg < 1:1415971/150‑1 (MQ=255) aggagATGATCAGAGAGACAATAATGCCTCCCAACATCAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTa > 2:320967/1‑150 (MQ=255) aggagATCATCAGAGAGACAATAATGCCACCCAACATCAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTa < 1:1039153/150‑1 (MQ=255) agaTGATCAGAGAGACAATAATGCCACCCAACATCAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAAc > 1:1017911/1‑150 (MQ=255) tgatCAGAGAGACAATAATGCCACCCAACATCAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAAcgcg > 1:78513/1‑150 (MQ=255) gatCAGAGAGACAATAATGCCACCCAACATCAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGt < 2:787421/150‑1 (MQ=255) gatCAGAGAGACAATAATGCCACCCAACATCAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGt > 1:1275502/1‑150 (MQ=255) atCAGAGAGACAATAATGCCACCCAACATCAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTCCCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGtt > 1:211047/1‑150 (MQ=255) atCAGAGAGACAATAATGCCACCCAACATCAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGtt < 2:1726198/150‑1 (MQ=255) tCAGAGAGACAATAATGCCACCCAACATCAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGttt < 2:446049/150‑1 (MQ=255) gcAGTGAGAAAATAATGCCACACAACATCAATAGCACAATCAGCGCCGCCAGTTTTACCATCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGttt < 2:1507476/149‑1 (MQ=255) agagagACAATAATGGCACCCAACATCAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGGTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTAc < 2:682519/150‑1 (MQ=255) agagagACAATAATGCCACCCAACATCAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTAc > 2:551152/1‑150 (MQ=255) agagagACAATAATGCCACCCAACATCAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTAAGTTAAACGCGTATAc > 2:1531594/1‑150 (MQ=255) gaCAATAATGCCACCCAACATCAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGt > 2:421184/1‑150 (MQ=255) ccACCCAACATCAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTaa < 1:488267/150‑1 (MQ=255) aCCCAACATCAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATg < 1:565055/150‑1 (MQ=255) cccAACATCAATAGCACAATCAGCGCCGCCTGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGc < 2:311133/150‑1 (MQ=255) cccAACATCAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGc > 1:482722/1‑150 (MQ=255) ccaCATCAATAGCACACTCAGCTCCGCCATTTTTAACCGCACGCTGAAAATTCTTGCTCCCTTTTTACCCGCGTGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCg < 2:858739/148‑1 (MQ=255) cAACATCAATAGCACAATTAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCAGTTTGTACTGCCg > 2:1001642/1‑150 (MQ=255) cAACATCAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCTGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCg < 2:1410940/150‑1 (MQ=255) cAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCAAAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTTATGCCGGATgcg > 2:131976/1‑150 (MQ=255) gCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTa > 2:819348/1‑150 (MQ=255) aaTCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTATAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAac < 1:1084304/150‑1 (MQ=255) aaTCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAac > 1:15323/1‑150 (MQ=255) aaTCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAac > 2:1268964/1‑150 (MQ=255) aaTCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAac > 1:918876/1‑150 (MQ=255) cAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACAcc > 2:1066258/1‑150 (MQ=255) gagcctccAGTTTTAACAGCACGCTGAAAATTATGTCTCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAACCGCGTTTACAAAGTCATTTTGTAATGCCGGTTGCGGCGTAAATCACCGt < 2:839254/148‑1 (MQ=255) gccgccAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTAc > 1:395008/1‑150 (MQ=255) cgccAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTAccc < 1:1453730/150‑1 (MQ=255) cAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCa < 1:1554371/88‑1 (MQ=255) cAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCa > 2:1554371/1‑88 (MQ=255) aGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGATACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGcc > 2:1041757/1‑150 (MQ=255) tttACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAACCGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTgg > 1:474558/1‑150 (MQ=255) tttACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTgg < 2:431374/150‑1 (MQ=255) tACCAGCACGCTGAAAATTATTTCGCCCTTTTTACCCTGTTGTTTAATAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTAGAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAg < 1:87681/150‑1 (MQ=255) ccAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGtt > 2:850125/1‑150 (MQ=255) aGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGtttt > 2:1690758/1‑150 (MQ=255) gCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTtta > 1:649492/1‑150 (MQ=255) gCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTtta < 2:1174577/150‑1 (MQ=255) cACGCTGAAAATTCTGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAACCGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttat < 1:1531594/150‑1 (MQ=255) cACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttat > 2:1595356/1‑150 (MQ=255) cACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGGCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttat < 1:320967/150‑1 (MQ=255) cGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttattt > 2:1520349/1‑149 (MQ=255) cGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCATAAAACACCGTACCCGGCCTGGAGTTttattt > 2:788758/1‑149 (MQ=255) gCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAg > 2:1354277/1‑150 (MQ=255) cTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGTCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGt > 2:1317875/1‑150 (MQ=255) gAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTAc < 2:1195322/150‑1 (MQ=255) aaaaTTATGTCGCCCTTTTTACCCGGTGTTTTAAATGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACa < 1:718255/150‑1 (MQ=255) aaaTTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttatta < 2:1296868/144‑1 (MQ=255) aaaTTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttatta > 1:1296868/1‑144 (MQ=255) tCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTAc < 2:1309366/150‑1 (MQ=255) cctgcTTTTAACCCACCGGGTAAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAACCGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTAcc > 2:800649/5‑150 (MQ=255) gCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCg > 2:574846/1‑150 (MQ=255) gCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCg > 1:1722976/1‑150 (MQ=255) gCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCg < 2:78513/150‑1 (MQ=255) gCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTCGATGCAGACATAAGTTACTCTTCAGTAAAACGCGTTTACAAAGTCATATTGTAATGCCGGATGCGGCGTATAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCTGCTTACCg > 1:258844/1‑150 (MQ=255) ctgcTTTTAACCCACCGGGTAAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTTGTACAGCGGCTTACCg > 1:933610/4‑150 (MQ=255) ctgcTTTTAACCCACCGGGTAAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCg > 1:481245/4‑150 (MQ=255) ccTTTTTACCCGGTGGGTTAAATGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGATAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCt < 1:647668/150‑1 (MQ=255) ccTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCt < 2:1658851/150‑1 (MQ=255) tttACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTg < 2:1451289/150‑1 (MQ=255) tttACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTg < 1:1652242/150‑1 (MQ=255) cccGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGTGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCtt > 1:852556/1‑150 (MQ=255) gTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAATTTACTCTTCAGTTAAACGCGGTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAat < 1:1001642/150‑1 (MQ=255) gTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAat < 2:420403/150‑1 (MQ=255) | TCCATAGGAAAGCCAGACCAAATTTCTGAATGCTCGGCCAGGAGGAGATGATCAGAGAGACAATAATGCCACCCAACATCAATAGCACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAAT > NC_000913/3910224‑3910517 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |