| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,106,369 | T→G | 6.6% | intergenic (+49/‑100) | cpxP → / → fieF | inhibitor of the cpx response; periplasmic adaptor protein/ferrous iron and zinc transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,106,369 | 0 | T | G | 6.6% | 394.1 / 12.8 | 144 | intergenic (+49/‑100) | cpxP/fieF | inhibitor of the cpx response; periplasmic adaptor protein/ferrous iron and zinc transporter |
| Reads supporting (aligned to +/- strand): ref base T (49/83); new base G (7/3); total (57/87) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.99e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.43e-01 | |||||||||||
Only 100 of 145 total aligned reads displayed.
AGAAACATCAACAACGAATGGAGCAGTTG‑‑‑‑‑CGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGTCGGGCGGCGATTGCTGCG > NC_000913/4106220‑4106516 | agaAACATCAACAACGAATGGAGCAGTTG‑‑‑‑‑CGTGACGTGACGCAATGGCAAAAAAGTTCATCGATGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGAAGTAAACCCTGTTTTCCTAGCCATAGACACCATACCTGTCTTCACCCACAt > 1:36480/1‑150 (MQ=255) aaaCATCAACAACGAATGGAGCAGTTG‑‑‑‑‑CGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGc > 1:626410/1‑150 (MQ=255) aaCATCAACAACGAATGGAGCAGTTG‑‑‑‑‑CGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCt > 1:349010/1‑150 (MQ=255) aTCAACAACGAATGGAGCAGTTG‑‑‑‑‑CGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCtgtg > 2:427507/1‑150 (MQ=255) tCAACAACGAATGGAGCAGTTG‑‑‑‑‑CGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCACCACATGCAGTgg > 1:1133833/1‑150 (MQ=255) tCAACAACGAATGGAGCAGTTG‑‑‑‑‑CGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGATCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACAATCTGTgg > 2:1523796/1‑150 (MQ=255) caacaaCGAATGGAGCAGTTGCGTGACGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCt > 2:18091/1‑150 (MQ=255) caacaaCGAATGGAGCAGTTG‑‑‑‑‑CGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTggg < 1:886720/150‑1 (MQ=255) caacaaCGAATGGAGCAGTTG‑‑‑‑‑CGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTggg < 1:1293719/150‑1 (MQ=255) caacaaCGAATGGAGCAGTTG‑‑‑‑‑CGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACAGCATGTggg < 1:169043/150‑1 (MQ=255) caacGAATGGAGCAGTTG‑‑‑‑‑CGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCCTCCCTGTCTTCCCCCACATGGGGTgggggg > 1:1543122/1‑149 (MQ=255) caacGAATGGAGCAGTTG‑‑‑‑‑CGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACAGCATGTggggga < 2:459912/150‑2 (MQ=255) cGAATGGAGCAGTTG‑‑‑‑‑CGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑tttt < 1:365498/150‑1 (MQ=255) tGGAGCAGTTG‑‑‑‑‑CGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑tttttttt < 2:171316/150‑1 (MQ=255) ggAGCAGTTG‑‑‑‑‑CGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑tttttgttt > 1:1164682/1‑149 (MQ=255) aGCAGTTG‑‑‑‑‑CGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATc < 1:1642339/150‑1 (MQ=255) aGCAGTTG‑‑‑‑‑CGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATc < 1:1018307/150‑1 (MQ=255) gCAGTTG‑‑‑‑‑CGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATcc < 2:667515/150‑1 (MQ=255) cattG‑‑‑‑‑CGTCACGTCACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGGGGGGG‑‑TTTTTTTTATCCta > 2:1726522/3‑149 (MQ=255) aGTTG‑‑‑‑‑CTTGACGTGACGCAATGGCAAAAAAGGTGCTCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTc < 2:324475/150‑1 (MQ=255) gg‑‑‑‑‑CGTGACGGGACGCAATGGCAAACAAGGTCATCGGTGACGCTAGTGAGTAGTAGCAACTCCCGTTCCCAGTAGTACCCCCTGTTTTCCTTGCCCTAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTGTATCCTCAAt < 1:117054/149‑1 (MQ=255) gacgtgacgCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGcc < 1:795800/150‑1 (MQ=255) gacgtgacgCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGcc < 2:1409686/150‑1 (MQ=255) cgtgacgCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCctg < 2:381016/150‑1 (MQ=255) cgtgacgCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCctg > 2:133693/1‑150 (MQ=255) cgtgacgCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCctg < 1:1209320/150‑1 (MQ=255) gtgacgCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCctgc > 1:1003225/1‑150 (MQ=255) tgacgCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCctgct < 1:223042/150‑1 (MQ=255) acgCAATGGCAAATAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCtgctgc < 2:421427/150‑1 (MQ=255) gCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCtt < 2:744535/150‑1 (MQ=255) aaTGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTaa > 1:1035922/1‑150 (MQ=255) cAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCAt > 2:1129434/1‑150 (MQ=255) cAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCAt < 1:1319338/150‑1 (MQ=255) aaaaaaGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCAtt < 2:563929/150‑1 (MQ=255) aaaaaaGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCAtt < 2:1341570/150‑1 (MQ=255) aaaaaGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTg < 2:851456/150‑1 (MQ=255) aaaaGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGc < 1:404453/150‑1 (MQ=255) gTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAgat < 1:1224163/150‑1 (MQ=255) ttCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAgatg < 2:1010434/150‑1 (MQ=255) tGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCtt > 2:1402394/1‑150 (MQ=255) gAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTc > 2:513547/1‑150 (MQ=255) aaGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAgatgat > 1:1342278/1‑142 (MQ=255) aaGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAgatgat < 2:1342278/142‑1 (MQ=255) aaGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTcc < 1:1626371/150‑1 (MQ=255) aaGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGGTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCGGCTTAATGCATTGCAGATGATTTGCTTcc < 1:1452214/150‑1 (MQ=255) tgCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCg < 1:1388490/149‑1 (MQ=255) aGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAATCCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCg > 1:77904/1‑150 (MQ=255) gCTATTGAGTAGTAGCAACTCACGTTGCCAGTAGTAAACCCTGTTTTCCTTGCCATAGTCACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGt < 1:1392916/150‑1 (MQ=255) tATTGAGTAGCAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTta < 2:50687/150‑1 (MQ=255) aTTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATGCTCAATTTGCCTTCTGCTTAATGCATTGCAGATGATTTGCTTACGtttt > 1:1309140/1‑148 (MQ=255) gAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACt < 2:1071514/150‑1 (MQ=255) gtagtaGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAg < 2:396706/150‑1 (MQ=255) tagtagCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGc < 1:18091/150‑1 (MQ=255) gCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTc < 1:955566/150‑1 (MQ=255) gCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAg < 1:744846/150‑1 (MQ=255) aaCTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACAGGCTGTGGGGG‑‑TTTTTTTTATACTAAATTTGCCTGGTGCTTAAAGGATTGCAGATGGTTTGGGTGCGGTTTACTAGCGTCAGtt > 1:1543952/1‑150 (MQ=255) aCTCACGTTCCCAGTAGTAAACCCTTTTTTCCTTGCCATAGACACCATCACTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGACTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTg < 1:836042/150‑1 (MQ=255) cTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGa > 2:965951/1‑150 (MQ=255) tCACGTTCCCAGTAGTAAACCCTGTGTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTAACCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGAt < 1:826709/150‑1 (MQ=255) cACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATa > 2:921691/1‑150 (MQ=255) cGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTGTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTGGATAGc > 2:676842/1‑150 (MQ=255) tCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCggg < 1:992706/150‑1 (MQ=255) tCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCggg < 2:1254067/150‑1 (MQ=255) tCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCggg < 2:946635/150‑1 (MQ=255) tCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCggg < 2:506933/150‑1 (MQ=255) cccAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGa < 2:1498234/150‑1 (MQ=255) cccAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGa < 1:1327200/150‑1 (MQ=255) acctgtagtaAACCCTGTTTTCCTTGGCATAGACACAATCACTTTCTTCCCCCTCATGCTGTGTGGG‑‑TTTTTTTTATCCTCAATTTGGCTGATGCTTAATGCATTGAAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGa < 1:450849/146‑1 (MQ=255) ccAGTATTAAAGCCTTTATTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAg < 1:113209/150‑1 (MQ=255) tagtaAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTATTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTAtt < 1:438722/150‑1 (MQ=255) atgaaaCCCTGTTTTCCTTGCCATAGCCACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTAttt < 2:771226/147‑1 (MQ=255) agtaAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTAttt > 1:218185/1‑150 (MQ=255) gtaAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTTATAGCGGTAGTATTTa > 1:798139/1‑150 (MQ=255) ccTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTACTGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGaatc < 2:1477344/150‑1 (MQ=255) ccTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGaatc < 2:1045564/150‑1 (MQ=255) gTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGaatcaat > 1:574794/1‑150 (MQ=255) gTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCATCAATTTGACTGCTGCTTAATGGATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTTTGaataaat > 2:169141/1‑150 (MQ=255) ttttCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGaatcaatc < 2:1543122/150‑1 (MQ=255) tgttCCTTGCCATAGACAGCATCCCTGTCTTCCCACACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGaatcaatc < 2:36480/148‑1 (MQ=255) tttCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCt < 2:1003225/150‑1 (MQ=255) tttCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCt < 1:1330233/150‑1 (MQ=255) ttCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCtt > 1:18169/1‑150 (MQ=255) cTTGCCATAGACACCATCCCAGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATg < 2:760466/150‑1 (MQ=255) cATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACgg > 2:1639650/1‑150 (MQ=255) cATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATACTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACgg > 1:356293/1‑150 (MQ=255) aTAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGc < 1:392069/150‑1 (MQ=255) tAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCt < 2:1646635/150‑1 (MQ=255) gaaacaaTCCCTGTCTTCCGACACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTgg < 2:1706033/144‑1 (MQ=255) cacCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTc > 1:673618/1‑150 (MQ=255) cATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGt < 2:218185/150‑1 (MQ=255) aaaaaacccccACAGCATGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGTCGggcg > 1:295041/7‑150 (MQ=255) cTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGTCGGgcggcg > 2:797766/1‑150 (MQ=255) cTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCATAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGTCGGgcggcg > 2:465150/1‑150 (MQ=255) aacccccACAGCATGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGTCGGGCGGCGa > 2:1229883/3‑150 (MQ=255) acccccACAGCATGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGTCGGGCGGCGAt > 2:889989/2‑150 (MQ=255) cccccACATGCAGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGTCGGGCGGCGAtt < 1:866277/150‑1 (MQ=255) cccccACAGCATGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGTCGGGCGGCGAtt > 1:513256/1‑150 (MQ=255) ccACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGCAGTATTAATGAATCAATCTAATGTACGGCTGGACAGTCGGGCTGCGATtgat > 1:1244612/1‑148 (MQ=255) caTGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGTCGGGCGGCGATTGCTGCg < 1:800483/150‑1 (MQ=255) caTGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGTCGGGCGGCGATTGCTGCg > 1:1410251/1‑150 (MQ=255) | AGAAACATCAACAACGAATGGAGCAGTTG‑‑‑‑‑CGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGTCGGGCGGCGATTGCTGCG > NC_000913/4106220‑4106516 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |