| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,106,371 | C→A | 5.4% | intergenic (+51/‑98) | cpxP → / → fieF | inhibitor of the cpx response; periplasmic adaptor protein/ferrous iron and zinc transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,106,371 | 0 | C | A | 5.4% | 418.6 / 9.0 | 143 | intergenic (+51/‑98) | cpxP/fieF | inhibitor of the cpx response; periplasmic adaptor protein/ferrous iron and zinc transporter |
| Reads supporting (aligned to +/- strand): ref base C (49/84); new base A (5/3); total (56/87) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.60e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.03e-01 | |||||||||||
Only 100 of 144 total aligned reads displayed.
AAACATCAACAACGAATGGAGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGTCGGGCGGCGATTGCTGCG > NC_000913/4106222‑4106516 | aaaCATCAACAACGAATGGAGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGc > 1:626410/1‑150 (MQ=255) aaCATCAACAACGAATGGAGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCt > 1:349010/1‑150 (MQ=255) tCAACAACGAATGGAGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCACCACATGCAGTgg > 1:1133833/1‑150 (MQ=255) tCAACAACGAATGGAGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGATCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACAATCTGTgg > 2:1523796/1‑150 (MQ=255) caacaaCGAATGGAGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTggg < 1:1293719/150‑1 (MQ=255) caacaaCGAATGGAGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACAGCATGTggg < 1:169043/150‑1 (MQ=255) aacaacGAATGGAGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCATGTCTTCCCCCACATGCTGTgggg < 1:413994/150‑1 (MQ=255) caacGAATGGAGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACAGCATGTggggga < 2:459912/150‑2 (MQ=255) caacGAATGGAGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGCAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑t > 1:50687/1‑150 (MQ=255) acGAATGGAGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACAGCATGTgggggaag < 2:197554/150‑4 (MQ=255) cGAATGGAGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑tttt > 1:797173/1‑150 (MQ=255) cGAATGGAGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑tttt < 1:365498/150‑1 (MQ=255) ggAGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑tttttgttt > 1:1164682/1‑149 (MQ=255) aGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATc < 1:1018307/150‑1 (MQ=255) aGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATc < 1:1642339/150‑1 (MQ=255) gCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATcc > 2:1434053/1‑150 (MQ=255) gCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATcc < 2:667515/150‑1 (MQ=255) cattGCGTCACGTCACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGGGGGGG‑‑TTTTTTTTATCCta > 2:1726522/3‑149 (MQ=255) aGTTGCTTGACGTGACGCAATGGCAAAAAAGGTGCTCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTc < 2:324475/150‑1 (MQ=255) ggCGTGACGGGACGCAATGGCAAACAAGGTCATCGGTGACGCTAGTGAGTAGTAGCAACTCCCGTTCCCAGTAGTACCCCCTGTTTTCCTTGCCCTAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTGTATCCTCAAt < 1:117054/149‑1 (MQ=255) gCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAAtt > 2:744846/1‑150 (MQ=255) gacgtgacgCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGcc < 2:171520/150‑1 (MQ=255) cgtgacgCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCctg < 1:1209320/150‑1 (MQ=255) cgtgacgCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCctg > 2:133693/1‑150 (MQ=255) cgtgacgCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCctg < 2:1060324/150‑1 (MQ=255) cgtgacgCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCctg < 2:381016/150‑1 (MQ=255) gtgacgCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCctgc > 1:1003225/1‑150 (MQ=255) tgacgCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCctgct < 1:223042/150‑1 (MQ=255) tgacgCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCctgct < 2:1517680/150‑1 (MQ=255) acgCAATGGCAAATAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCtgctgc < 2:421427/150‑1 (MQ=255) aataaaTGGAAAAAAAG‑TCATAGGTGAACTCAATGACTTCTAGGAACAGACCTTCCCAGTACTTAACCCTTTTTACCATGCCAATGTCACCAACCATGGCTTGCCCCACCAGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTgctgct < 2:1159618/146‑1 (MQ=255) cAATGGCAAAAAAGTTCATCGTTGAAGCTTTTGAGGAGTAGCAACTCACGTTCCCTGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTa < 1:252972/150‑1 (MQ=255) aaTGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTaa > 1:1035922/1‑150 (MQ=255) ggCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGc < 1:810468/150‑1 (MQ=255) cAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCAt < 1:1319338/150‑1 (MQ=255) cAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCAt > 1:6159/1‑150 (MQ=255) aaaaaaGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCAtt < 2:1341570/150‑1 (MQ=255) aaaaaaGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCAtt < 2:563929/150‑1 (MQ=255) aaaaaGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTg < 2:851456/150‑1 (MQ=255) aaaaGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGACATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGc < 1:1242172/150‑1 (MQ=255) aaaGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCa < 1:200346/150‑1 (MQ=255) gTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAgat < 1:1224163/150‑1 (MQ=255) ttCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAgatg < 2:1010434/150‑1 (MQ=255) tGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCtt > 2:1402394/1‑150 (MQ=255) gAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTc > 2:513547/1‑150 (MQ=255) aaGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAgatgat > 1:1342278/1‑142 (MQ=255) aaGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTcc < 1:1626371/150‑1 (MQ=255) aaGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGGTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCGGCTTAATGCATTGCAGATGATTTGCTTcc < 1:1452214/150‑1 (MQ=255) tgCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCg < 1:1388490/149‑1 (MQ=255) aGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAATCCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCg > 1:77904/1‑150 (MQ=255) gCTATTGAGTAGTAGCAACTCACGTTGCCAGTAGTAAACCCTGTTTTCCTTGCCATAGTCACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGt < 1:1392916/150‑1 (MQ=255) cTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGtt < 2:1704439/150‑1 (MQ=255) tATTGAGTAGCAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTta < 2:50687/150‑1 (MQ=255) aTTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATGCTCAATTTGCCTTCTGCTTAATGCATTGCAGATGATTTGCTTACGtttt > 1:1309140/1‑148 (MQ=255) gAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACt < 2:1071514/150‑1 (MQ=255) gtagtaGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAg < 2:396706/150‑1 (MQ=255) tagtagCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGc < 1:18091/150‑1 (MQ=255) agtagCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCg > 1:763471/1‑150 (MQ=255) agtagCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TGTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCg > 2:446303/1‑150 (MQ=255) gCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTc < 1:955566/150‑1 (MQ=255) gCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAg < 1:744846/150‑1 (MQ=255) cAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGt < 1:1458787/150‑1 (MQ=255) aaCTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACAGGCTGTGGGGG‑‑TTTTTTTTATACTAAATTTGCCTGGTGCTTAAAGGATTGCAGATGGTTTGGGTGCGGTTTACTAGCGTCAGtt > 1:1543952/1‑150 (MQ=255) cTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGa > 2:965951/1‑150 (MQ=255) tCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGAt > 1:960280/1‑150 (MQ=255) tCACGTTCCCAGTAGTAAACCCTGTGTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTAACCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGAt < 1:826709/150‑1 (MQ=255) cACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATa > 2:921691/1‑150 (MQ=255) cGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTGTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTGGATAGc > 2:676842/1‑150 (MQ=255) tCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCggg < 1:992706/150‑1 (MQ=255) tCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCggg < 2:506933/150‑1 (MQ=255) tCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCggg < 2:946635/150‑1 (MQ=255) tCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCggg < 2:1254067/150‑1 (MQ=255) cccAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGa < 1:1327200/150‑1 (MQ=255) ccAGTATTAAAGCCTTTATTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAg < 1:113209/150‑1 (MQ=255) tagtaAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTATTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTAtt < 1:438722/150‑1 (MQ=255) atgaaaCCCTGTTTTCCTTGCCATAGCCACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTAttt < 2:771226/147‑1 (MQ=255) gtaAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTTATAGCGGTAGTATTTa > 1:798139/1‑150 (MQ=255) aaaCCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATg < 1:390163/150‑1 (MQ=255) ccTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTACTGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGaatc < 2:1477344/150‑1 (MQ=255) ttttCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGaatcaatc < 2:1543122/150‑1 (MQ=255) tgttCCTTGCCATAGACAGCATCCCTGTCTTCCCACACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGaatcaatc < 2:36480/148‑1 (MQ=255) tttCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCt < 1:1330233/150‑1 (MQ=255) ttCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCtt > 1:18169/1‑150 (MQ=255) cTTGCCATAGACACCATCCCAGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATg < 2:760466/150‑1 (MQ=255) cATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACgg > 1:845361/1‑150 (MQ=255) cATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACgg > 2:1639650/1‑150 (MQ=255) cATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATACTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACgg > 1:356293/1‑150 (MQ=255) aTAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGc < 1:392069/150‑1 (MQ=255) tAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCt < 2:1646635/150‑1 (MQ=255) gaaacaaTCCCTGTCTTCCGACACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTgg < 2:1706033/144‑1 (MQ=255) cATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGt < 2:218185/150‑1 (MQ=255) cTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGTCGGgcggcg > 2:797766/1‑150 (MQ=255) cTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGTCGGgcggcg > 2:1004309/1‑150 (MQ=255) cTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGTCGGgcggcg > 2:1344433/1‑150 (MQ=255) cTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCATAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGTCGGgcggcg > 2:465150/1‑150 (MQ=255) aacccccACAGCATGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGTCGGGCGGCGa > 2:1229883/3‑150 (MQ=255) acccccACAGCATGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGTCGGGCGGCGAt > 2:889989/2‑150 (MQ=255) cccccACATGCAGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGTCGGGCGGCGAtt < 1:866277/150‑1 (MQ=255) cccccACAGCATGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGTCGGGCGGCGAtt > 1:513256/1‑150 (MQ=255) acaTGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGTCGGGCGGCGATtgctgc > 1:1405148/1‑150 (MQ=255) | AAACATCAACAACGAATGGAGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGCTGTGGGGG‑‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGTCGGGCGGCGATTGCTGCG > NC_000913/4106222‑4106516 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |