| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,531,122 | T→G | 9.5% | K177T (AAA→ACA) | sgcX ← | putative endoglucanase with Zn‑dependent exopeptidase domain |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,531,122 | 0 | T | G | 9.5% | 298.8 / 17.7 | 111 | K177T (AAA→ACA) | sgcX | putative endoglucanase with Zn‑dependent exopeptidase domain |
| Reads supporting (aligned to +/- strand): ref base T (55/45); new base G (4/7); total (59/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.42e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.71e-01 | |||||||||||
Only 100 of 112 total aligned reads displayed.
CACGGCGTAATACGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGCGTCGTCTTTGTCTTTGGCACCAATATCAATCCACAGTTTGTCGACAGAAGGTGACTGCGTGCGC > NC_000913/4530976‑4531271 | acGGCGTAATACGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACATC‑CTAGACGATCGTCTAGTGCTTTACt > 2:898065/1‑150 (MQ=255) ggCGTAATACGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTAAAGCACTAGACGATCGTCTAG‑GCTGTACTGc < 1:1317050/150‑1 (MQ=39) gcttAATACGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTAAAGCACTAGACGATCGTCTAG‑GCTGTACTGcc < 1:139041/147‑2 (MQ=38) cGTAATACGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGcac > 1:819732/1‑150 (MQ=255) cGTAATACGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGcac < 1:465569/150‑1 (MQ=255) cGTAATACGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTAAAGCACTAGACGATCGTCTAG‑GCTGTACTGccc < 2:1425080/150‑3 (MQ=39) cGTAATACGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTAAAGCACTAGACGATCGTCTAG‑GCTGTACTGccc < 2:1311781/150‑3 (MQ=39) cGTAATACGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTAAAGCACTAGACGATCGTCTAG‑GCTGTACTGccc < 2:890641/150‑3 (MQ=39) cGTAATACGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTAAAGCACTAGACGATCGTCTAG‑GCTGTACTGccc < 1:1711898/150‑3 (MQ=39) tAATACGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCacac > 2:1488342/1‑150 (MQ=255) tAATACGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATAGCACGCTCCATAGTACTGATACCATCCGCTACACCGCGCATGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCacac < 1:951731/150‑1 (MQ=255) aaTACGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACAcc < 2:1276787/150‑1 (MQ=255) aaTACGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACAcc > 1:1251712/1‑150 (MQ=255) aaTACGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACAcc > 1:1005827/1‑150 (MQ=255) aaTACGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTAAAGCACTAGACGATCGTCTAG‑GCTGTACTGccctgc < 1:111596/150‑6 (MQ=38) tACGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAg > 1:1091550/1‑150 (MQ=255) cGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCTTCTAGTGCTGTACTGCACACCAGag > 1:664427/1‑149 (MQ=255) gggAACAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATc < 2:1413652/150‑1 (MQ=255) aCAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGttt < 2:819732/150‑1 (MQ=255) aCAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGttt < 1:1343670/150‑1 (MQ=255) aTGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGcc > 1:405543/1‑150 (MQ=255) gCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAg < 1:693119/150‑1 (MQ=255) gcgGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAg < 2:891575/150‑1 (MQ=255) ggATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGtt > 2:670932/1‑150 (MQ=255) atTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTgcgg > 1:562460/1‑150 (MQ=255) ttAACTTCTTCCTGTACCGACGCCACCAGCTAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTgcggc < 1:1246994/150‑1 (MQ=255) tAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTgcggcg < 1:1194263/150‑1 (MQ=255) tAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTgcggcg > 2:313953/1‑150 (MQ=255) ataTTCTTCCTGTACCGAAGCCACCAGATAAACGGCTATATCAAGCTCCATAGTACTGTTAGCATCCGCTACACCGAGCAGGGCAGTACAGG‑CTAGAGGATCGTGTAGTGCTTTACTGCAGACAAGATCGTTTGCCAGGAGTTGcggcgg < 1:1229372/148‑1 (MQ=255) aaTTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCggg < 1:1604621/150‑1 (MQ=255) aaTTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCggg < 2:583985/150‑1 (MQ=255) ttcttcCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGtt < 2:230809/150‑1 (MQ=255) tcttcCTGTACCGAAGCCACCAGATAAACGGAGATATCAAGCTCCATAGTACTTAAAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTta < 2:1065657/150‑1 (MQ=255) cTGTACCGAAGCCACCAGATAAACGGCGATATCACGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGAGCGTTTGCCAGGAGTTGCGGCGGGTTATActg > 2:323785/1‑148 (MQ=255) tGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACaga > 2:1588974/1‑150 (MQ=255) gTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACCGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGAGCGTTTGCCAGGAGTTGCGGCGGGTTATACagag > 2:137042/1‑150 (MQ=255) tACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGt < 2:619456/150‑1 (MQ=255) aCCGAATCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACTCCGAGCATAGCAGTACAGC‑CTAGACTATCGTCTAGTGCTTTACTGCACACCATATCGTTTGCAAGGAGATGCGTCGGGTTATACagagag > 2:21311/1‑148 (MQ=255) aaGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGGTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAg < 1:1609608/150‑1 (MQ=255) aGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAgg < 1:662888/150‑1 (MQ=255) ccaccaGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCg < 2:1562445/150‑1 (MQ=255) caccaGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGt > 2:200768/1‑150 (MQ=255) aGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACATAGTGACAGGCGTACCg > 2:1040785/1‑150 (MQ=255) aaaCGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCt < 1:401257/150‑1 (MQ=255) aaaCGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCt > 2:928810/1‑150 (MQ=255) aaCGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCATGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTg < 1:1311263/150‑1 (MQ=255) aaCGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTg < 1:1308889/150‑1 (MQ=255) aaCGGCGAAATCCAGCTCCATACTACTCATAGCAGCCGCTACACCGAGCAGGGCAGTACTGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGGTATACAGAGTGACAGGCGTACCGACCTg < 2:1073980/150‑1 (MQ=255) cGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGaa > 1:1154169/1‑150 (MQ=255) cGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGaa > 1:1420365/1‑150 (MQ=255) ggCGATATCAAGCTCCATAGTACTGATAGCATCCGCTAAAACGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCATATCGTTTGCCAGGAGTTGATGCGGGTTATACAGAGTGACAGGCGTACAGACCTGAAt > 2:720771/1‑150 (MQ=255) gCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATg < 1:922216/150‑1 (MQ=255) gATATCAAGCTCCATAGTACTGATAGCATCCGCTACCCCGAGCAGGGCAGTACAGC‑CTAGACGCTCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGCCCGGAATGcc > 2:1020941/1‑150 (MQ=255) gATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGcc > 1:885111/1‑150 (MQ=255) tatCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGTCAGGCGTACCGACCTGAATGCCCa > 2:887090/1‑150 (MQ=255) tatCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGACTGCCCa > 1:1182471/1‑150 (MQ=255) cAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTGTGCCAGGAGTTGCGGCGGGTTATACCGAGTGACAGGCGTACCGCCCTGAATGCCCATcc > 2:1190051/1‑150 (MQ=255) aaGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCg < 1:1352767/150‑1 (MQ=255) aaGCTCCAAAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCCTCCg > 1:1128272/1‑150 (MQ=255) gCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGta > 2:1078956/1‑150 (MQ=255) aTAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGcg < 1:1488342/150‑1 (MQ=255) aGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGcgtc < 1:200768/150‑1 (MQ=255) tGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGCGTCgtctt < 1:1443736/150‑1 (MQ=255) gATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGATTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGGATAGCGTCgtcttt > 1:1403237/1‑150 (MQ=255) aTAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGCGTCgtcgttg > 1:1623601/1‑150 (MQ=255) aGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGCGTCgtctttgtc < 2:927976/150‑1 (MQ=255) cATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGCGTCgtctttgtctt < 1:1286510/150‑1 (MQ=255) cATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGCGTCgtctttgtctt < 1:1726086/150‑1 (MQ=255) tCCGCTAAACCGAGCAGGGCAGTACAGC‑ATAGACGATCGTCTAGTGCTTTACTGCACACCAGAGCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCACATCCGTATAGCGTCgtcgttgtagttt > 1:603567/1‑145 (MQ=255) ccGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGCGTCGTCTTTGTCTTTgg > 1:1603822/1‑150 (MQ=255) cGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTGTGCCTGGAGTTGCGGCGGTTTATACAGAGTGACAGGCGTACCGACCTGAAGGCCCATCCGTATAGCGTCGTCtttggctttggc > 2:863938/1‑150 (MQ=255) cacCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATCCCCCTCCGTATAGCGTCGTGTTTGTCTTTGGCACCaa > 2:832650/1‑150 (MQ=255) ccGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGCGTCGTCTTTGTCTTTGGCACCAata > 2:39475/1‑150 (MQ=255) ccGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGCGTCGTCTTTGTCTTTGGCACCAata < 1:1078956/150‑1 (MQ=255) cAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGCGTCGTCTTTGTCTTTGGCACCAATATCAAt > 2:1304604/1‑150 (MQ=255) gggCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGCGTCGTCTTTGTCTTTGGCACCAATATCAATcc > 2:1721334/1‑150 (MQ=255) gggCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGCGTCGTCTTTGTCTTTGGCACCAATATCAATcc > 2:841458/1‑150 (MQ=255) gggCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGCGTCGTCTTTGTCTTTGGCAACAATATCAAAcc > 1:1417257/1‑150 (MQ=255) cAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGCGTCGTCTTTGTCTTTGGCACCAATATCAATCcaca < 1:175823/150‑1 (MQ=255) cAGTAAAGCACTAGACGATCGTCTAG‑GCTGTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGCGTCGTCTTTGTCTTTGGCACCAATATCAATCcaca > 1:1251166/1‑150 (MQ=39) aGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGCGTCGTCTTTGTCTTTGGCACCAATATCAATCCACAg < 2:1498321/150‑1 (MQ=255) gTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGCGTCGTCTTTGTCTTTGGCACCAAAATCAATCAACAGt > 2:1583073/1‑150 (MQ=255) gC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGCGTCGTCTTTGTCTTTGGCACCAATATCAATCCACAGTTTGTc > 2:1147990/1‑150 (MQ=255) gC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGAGTACCGACCTGAATGCCCATCCGTATAGCGTCGTCTTTGTCTTTGGCACCAATATCAATCCACAGTTTGTc < 1:898065/150‑1 (MQ=255) tAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGCGTCGTCTTTGTCTTTGGCACCAATATCAATCCACAGTTTGTCGAc > 2:932123/1‑150 (MQ=255) gACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGCGTCGTCTTTGTCTTTGGCACCAATATCAATCCACAGTTTGTCGACAg > 1:996837/1‑150 (MQ=255) cGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGCGTCGTCTTTGTCTTTGGCACCAATATCAATCCACAGTTTGTCGACAGAAGGTg < 1:670932/150‑1 (MQ=255) cGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGCGTCGTCTTTGTCTTTGGCACCAATATCAATCCACAGTTTATCGACAGAAGGTg < 2:1561204/150‑1 (MQ=255) tCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGCGTCGTCTTTGTCTTTGGCACCAATATCAATCCACAGTTTGTCGACAGAAGGTGAc < 1:39475/150‑1 (MQ=255) tCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGCGTCGTCTTTGTCTTTGGCACCAATATCAATCCACAGTTTGTCGACAGAAGGTGAc < 1:1304604/150‑1 (MQ=255) tCTAGTGCTTTACTGCACACCAGATCGTTTGCCACGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGCGTCGTCTTTGTCTTTGGCACCAATATCAATCCACAGTTTGTCGACAGAAGGTGAc < 2:1091550/150‑1 (MQ=255) cTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGCGTCGTCTTTGTCTTTGGCACCAATATCAATCCACAGTTTGTCGACAGAAGGTGACt > 1:441201/1‑150 (MQ=255) tAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGCGTCGTCTTTGTGTTTGGCCCCAATTTGAATCCCCAGTTTGTCGACAGAAGGTGGCtg > 2:357435/1‑150 (MQ=255) tAGTGCTTTACTGCACACCAGATCGTTTGACAGGAGTTCCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGACCATCCGTATAGCGTCGTCTTTGTCTTTGGCTCCAAAATCAATCCACAGATTGTCGACATAAGTTGACtt > 1:269158/1‑149 (MQ=255) aGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGCGTCGTCTTTGTCTTTGGCACCAATATCAATCCACAGTTTGTCGACAGAAGGTGACtgc < 2:1005827/150‑1 (MQ=255) gTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGCCCTGAATGCCCATCCGTATAGCGTCGTCTTTGTCTTTGGCACCAATATCAATCCACAGTTTGTCGACAGAAGGTGACtgcg > 2:46621/1‑150 (MQ=255) aggCTGTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGCGTTAAACAGAGTGACAGGCGTACCGACCAGAATGACCATCCGTATAGCGTCGTCTTTTTCTTTGGCACCAATATAAAAACACAGTTTGTCCACAGAAGGAGACagcg > 2:485250/3‑150 (MQ=255) gCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGCGTCGTCTTTGTCTTTGGCACCAATATCAATCCACAGTTTGTCGACAGAAGGTGACtgcgtg > 1:139062/1‑150 (MQ=255) cTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGCGTCGTCTTTGTCTTTGGCCCCAATATCAATCCACAGTTTGTCGACAGAAGGTGACtgcgtgc > 2:700223/1‑150 (MQ=255) ttACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGCGTCGTCTTTGTCTTTGGCACCAATATCAATCCACAGTTTGTCGACAGAAGGTGACTGCGTgcgc < 2:1233220/150‑1 (MQ=255) | CACGGCGTAATACGGGAACAATGCCGCGGATATTAAATTCTTCCTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGCGTCGTCTTTGTCTTTGGCACCAATATCAATCCACAGTTTGTCGACAGAAGGTGACTGCGTGCGC > NC_000913/4530976‑4531271 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |