Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 963,761 T→C 8.7% intergenic (+93/‑67) rpsA → / → ihfB 30S ribosomal subunit protein S1/integration host factor (IHF), DNA‑binding protein, beta subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913963,7610TC 8.7% 321.7 / 16.1 115intergenic (+93/‑67)rpsA/ihfB30S ribosomal subunit protein S1/integration host factor (IHF), DNA‑binding protein, beta subunit
Reads supporting (aligned to +/- strand):  ref base T (51/53);  new base C (4/6);  total (55/60)
Fisher's exact test for biased strand distribution p-value = 7.44e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.23e-01

Only 100 of 118 total aligned reads displayed.

CAAACTTCTCCAACAACGCAATGGCTGAAGCTTTCAAAGCAGCTAAAGGCGAGTAATTCTCTGACTCTTCGGGATTTTTATTCCGAAGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCAAGTCAGAATTGATAGAAAGACTTGCCACCCAGCAATCGCACATTCCCGCCAAGACGGTTGAAGATGCAGTAAAAGA  >  NC_000913/963613‑963910
                                                                                                                                                    |                                                                                                                                                     
cAAACTTCTCCAACAACGCAATGGCTGAAGCTTTCAAAGCAGCTAAAGGCGAGTAATTCTCTGACTCTTCGGGATTTTTATTCCGAAGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTa                                                                                                                                                      >  1:632058/1‑150 (MQ=255)
    cTTCTCCAACAACGCAATGGCTGAAGCTTTCAAAGCAGCTAAAGGCGAGTAATTCTCTGACTCTTCGGGATTTTTATTCCGAAGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGgc                                                                                                                                                  >  1:1581744/1‑150 (MQ=255)
       ctcCAACAACGCAATGGCTGAAGCTTTCAAAGCAGCTAAAGGCGAGTAATTCTCTGACTCTTCGGGATTTTTATTCCGAAGTTTGTTGAGTTTACTTGCCAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGgccgc                                                                                                                                               >  1:311318/1‑150 (MQ=255)
        tcCAACAACGCAATGGCTGAAGCTTTCAAAGCAGCTAAAGGCGAGTAATTCTCTGACTCTTCGGGATTTTTATTCCGAAGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGgccgcc                                                                                                                                              <  1:787318/150‑1 (MQ=255)
         ccAACAACGCAATGGCTGAAGCTTTCAAAGCAGCTAAAGGCGAGTAATTCTCTGACTCTTCGGGATTTTTATTCCGAAGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGccc                                                                                                                                             >  1:1435834/1‑150 (MQ=255)
         ccAACAACGCAATGGCTGAAGCTTTCAAAGCAGCTAAAGGCGAGTAATTCTCTGACTCTTCGGGATTTTTATTCCGAAGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGccc                                                                                                                                             >  2:425151/1‑150 (MQ=255)
          caacaaCGCAATGGCTGAAGCTTTCAAAGCAGCTAAAGGCGAGTAATTCTCTGACTCTTCGGGATTTTTATTCCGAAGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCt                                                                                                                                            <  2:1027161/150‑1 (MQ=255)
          caacaaCGCAATGGCTGAAGCTTTCAAAGCAGCTAAAGGCGAGTAATTCTCTGACTCTTCGGGATTTTTATTCCGAAGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCt                                                                                                                                            >  1:1360467/1‑150 (MQ=255)
           aacaacGCAATGGCTGAAGCTTTCAAAGCAGCTAAAGGCGAGTAATTCTCTGACTCTTCGGGATTTTTATTCCGAAGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCCGTAGCCGCCCtt                                                                                                                                           <  1:1509111/150‑1 (MQ=255)
             caacGCAATGGCTGAAGCTTTCAAAGCAGCTAAAGGCGAGTAATTCTCTGACTCTTCGGGATTTTTATTCCGAAGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCCGTAGCCGCCCTTag                                                                                                                                         <  2:721819/150‑2 (MQ=255)
              aacGCAATGGCTGAAGCTTTCAAAGCAGCTAAAGGCGAGTAATTCTCTGACTCTTCGGGATTTTTATTCCGAAGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCCGTAGCCGCCCTTagt                                                                                                                                        <  2:1588984/150‑3 (MQ=255)
              aacGCAATGGCTGAAGCTTTCAAAGCAGCTAAAGGCGAGTAATTCTCTGACTCTTCGGGATTTTTATTCCGAAGTTTGTTGAGTTTACTTGACAGATTGCACGTTTCGTCCTGTAATCAAGCACTAAGGGCGTCCGTAGCCGCCCTTagt                                                                                                                                        <  1:1105278/150‑3 (MQ=255)
               acGCAATGGCTGAAGCTTTCAAAGCAGCTAAAGGCGAGTAATTCTCTGACTCTTCGGGATTTTTATTCCGAAGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCCGTAGCCGCCCTTagtg                                                                                                                                       <  2:433619/150‑4 (MQ=255)
                cGCAATGGCTGAAGCTTTCAAAGCAGCTAAAGGCGAGTAATTCTCTGACTCTTCGGGATTTTTATTCCGAAGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCa                                                                                                                                      <  1:695680/150‑1 (MQ=255)
                    aTGGCTGAAGCTTTCAAAGCAGCTAAAGGCGAGTAATTCTCTGACTCTTCGGGATTTTTATTCCGAAGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATgc                                                                                                                                  <  1:465787/150‑1 (MQ=255)
                     tGGCTGAAGCTTTCAAAGCAGCTAAAGGCGAGTAATTCTCTGACTCTTCGGGATTTTTATTCCGAAGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATgca                                                                                                                                 <  1:724300/150‑1 (MQ=255)
                     tGGCTGAAGCTTTCAAAGCAGCTAAAGGCGAGTAATTCTCTGACTCTTCGGGATTTTTATTCCGAAGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATgca                                                                                                                                 <  1:717890/150‑1 (MQ=255)
                       gCTGAAGCTTTCAAAGCAGCTAAAGGCGAGTAATTCTCTGACTCTTCGGGATTTTTATTCCTAAGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCAGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATgcagc                                                                                                                               >  1:339509/1‑150 (MQ=255)
                       gCTGAAGCTTTCAAAGCAGCTAAAGGCGAGTAATTCTCTGACTCATCGGGATTTTTATTCCGAAGTTTGTTGAGTTTACTTGACAGATTGCAGGTGTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATgcagc                                                                                                                               <  1:886049/150‑1 (MQ=255)
                        cTGAAGCTTTCAAAGCAGCTAAAGGCGAGTAATTCTCTGACTCTTCGGGATTTTTATTCCGAAGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATgcagca                                                                                                                              >  2:150640/1‑150 (MQ=255)
                            aGCTTTCAAAGCAGCTAAAGGCGAGTAATTCTCTGACTCTTCGGGATTTTTATTCCGAAGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAAcag                                                                                                                          >  2:802781/1‑150 (MQ=255)
                             gCTTTCAAAGCAGCTAAAGGCGAGTAATTCTCTGACTCTTCGGGATTTTTATTCCGAAGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAAcagc                                                                                                                         >  2:123538/1‑150 (MQ=255)
                              cTTTCAAAGCAGCTAAAGGCGAGTAATTCTCTGACTCTTCGGGATTTTTATTCCGAAGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAAcagca                                                                                                                        >  2:906362/1‑150 (MQ=255)
                                ttCAAAGCAGCTAAAGGCGAGTAATTCTCTGACTCTTCGGGATTTTTATTCCGAAGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACagcagc                                                                                                                      <  2:1694569/150‑1 (MQ=255)
                                ttCAAAGCAGCTAAAGGCGAGTAATTCTCTGACTCTTCGGGATTTTTATTCCGAAGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACagcagc                                                                                                                      <  2:906330/150‑1 (MQ=255)
                                    aaGCAGCTAAAGGCGAGTAATTCTCTGACTCTTCGGGATTTTTATTCCGAAGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCt                                                                                                                  >  1:1200932/1‑150 (MQ=255)
                                    aaGCAGCAAACGGCGAGTAATACTCTGACTCTTCGGGATTTTAATTCCGAATTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCt                                                                                                                  <  2:1443189/150‑1 (MQ=255)
                                             aaGGCGAGTAATTCTCTGACTCTTCGGGATTTTTATTCCGAAGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGcc                                                                                                         <  1:304699/150‑1 (MQ=255)
                                                 cGAGTAATTCTCTGACTCTTCGGGATTTTTATTCCGAAGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTa                                                                                                     <  1:916552/150‑1 (MQ=255)
                                                 cGAGTAATTCTCTGACTCTTCGGGATTTTTATTCCGAAGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTa                                                                                                     <  1:1702476/150‑1 (MQ=255)
                                                   aGTAATTCTCTGACTCTTCGGGATTTTTATTCCGAAGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCTTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAg                                                                                                   <  1:1672070/150‑1 (MQ=255)
                                                   aGTAATTCTCTGACTCTTCGGGATTTTTATTCCGAAGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAg                                                                                                   <  2:1097122/150‑1 (MQ=255)
                                                        ttCTCTGACTCTTCGGGATTTTTATTCCGAAGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAAcc                                                                                              <  2:1435834/150‑1 (MQ=255)
                                                        ttCTCTGACTCTTCGGGATTTTTATTCCGAAGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAAcc                                                                                              <  1:885493/150‑1 (MQ=255)
                                                            ctGACTCTTCGGGATTTTTATTCCGAAGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTATTCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCggag                                                                                          >  1:337141/1‑150 (MQ=255)
                                                            ctGACTCTTCGGGATTTTTATTCCGAAGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCggag                                                                                          <  1:601871/150‑1 (MQ=255)
                                                             tGACTCTTCGGGATTTTTATTCCGAAGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCggagg                                                                                         <  1:511391/150‑1 (MQ=255)
                                                              gACTCTTCGGGATTTTTATTCCGAAGTTTGTTGAGATTACTTGACAGATTGAAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCAGCCCTAAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTAAAGGAACCggagga                                                                                        >  1:1115058/1‑150 (MQ=255)
                                                                ctctTCGGGATTTTTATTCCGAAGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAAt                                                                                      <  2:665053/150‑1 (MQ=255)
                                                                     cGGGATTTTTATTCCGAAGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGa                                                                                 >  1:763624/1‑150 (MQ=255)
                                                                      gggATTTTTATTCTGAAGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCCTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTTATGAACCGGAGGAATCATGAc                                                                                <  1:749201/150‑1 (MQ=255)
                                                                        gATTTTTATTCCGAAGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGAcct                                                                              <  1:425151/150‑2 (MQ=255)
                                                                         aTTTTTATTCCGAAGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCaa                                                                             >  1:717878/1‑150 (MQ=255)
                                                                          tttttATTCCGAAGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCAAg                                                                            >  1:538892/1‑150 (MQ=255)
                                                                          tttttATTCCGAAGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCAAg                                                                            <  1:950748/150‑1 (MQ=255)
                                                                            tttATTCCGAAGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGTAACCGGAGGAATCATGACCAAGta                                                                          >  2:96044/1‑149 (MQ=255)
                                                                              tATTCTGAATTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCATTGCAGCTACAGCAGCCGCTTAATTTGCCTTTAATTAACCGGAGTAATCATGACCATGTCAg                                                                        <  2:869929/150‑1 (MQ=255)
                                                                                 tCCGAAGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTCCGGCCTCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCAAGTCAGAAt                                                                     >  2:223172/1‑150 (MQ=255)
                                                                                  ccGAAGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCAAGTCAGAAtt                                                                    <  2:349403/150‑1 (MQ=255)
                                                                                  ccGAAGTTTGTTGAGTTTACTTGACAGATTGAAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGATTAATTTGCCTTTAAGGAACCTGAGGAATCATGACAAAGTCAGAAtt                                                                    >  1:1141146/1‑150 (MQ=255)
                                                                                    gAAGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCAAGTCAGAATTGa                                                                  <  1:123538/150‑1 (MQ=255)
                                                                                    gAAGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGCGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAATGAACCGGAGGAATCATGACCAAGTCAGAATTGa                                                                  <  2:1644684/150‑1 (MQ=255)
                                                                                     aaGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCAAGTCAGAATTGAt                                                                 <  1:496346/150‑1 (MQ=255)
                                                                                      aGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCAAGTCAGAATTGATa                                                                <  1:449063/150‑1 (MQ=255)
                                                                                      aGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCAAGTCAGAATTGATa                                                                >  2:575757/1‑150 (MQ=255)
                                                                                           tttcaGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCAAGTCAGAATTCATAGAAAg                                                           >  1:49686/5‑150 (MQ=255)
                                                                                              gAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCAAGTCAGAATTGATAGAAAGACt                                                        >  2:1691117/1‑150 (MQ=255)
                                                                                                gTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCAAGTCAGAATTGATAGAAAGACTTg                                                      <  2:311318/150‑1 (MQ=255)
                                                                                                gTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATATGCCTTTAAGGAACCGGAGGAATCATGACCAAGTCAGAATTGATAGAAAGACtat                                                      >  2:397025/1‑148 (MQ=255)
                                                                                                  ttACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGAAACAGCATACGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCAAGTCAGAATTGATAGAAAGACTTGcc                                                    <  2:1300209/150‑1 (MQ=255)
                                                                                                   tACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCAAGTCAGAATTGATAGAAAGACTTGCCa                                                   >  1:543645/1‑150 (MQ=255)
                                                                                                   tACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCAAGTCAGAATTGATAGAAAGACTTGCCa                                                   <  2:149575/150‑1 (MQ=255)
                                                                                                        gACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCAAGTCAGAATTGATAGAAAGACTTGCCACCCAg                                              >  2:405221/1‑150 (MQ=255)
                                                                                                         aCAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCAAGTCAGAATTGATAGAAAGACTTGCCACCCAGc                                             <  2:813262/150‑1 (MQ=255)
                                                                                                         aCAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCAAGGCAGAATTGATAGAAAGACTTGCCACCCAGc                                             <  1:1261246/150‑1 (MQ=255)
                                                                                                            gATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCAAGTCAGAATTGATAGAAAGACTTGCCACCCAGCAAt                                          >  1:228078/1‑150 (MQ=255)
                                                                                                                gCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCCAGACAGAATTGATAGAAAGACTTGCCACCCAGCAATCGca                                      >  1:765/1‑150 (MQ=255)
                                                                                                                gCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCAAGTCAGAATTGATAGAAAGACTTGCCACACAGCAATCGca                                      >  1:256654/1‑150 (MQ=255)
                                                                                                                      ttCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCAAGTCAGAATTGATAGAAAGACTTGCCACCCAGCAATCGCACATTcc                                >  2:823216/1‑150 (MQ=255)
                                                                                                                        cGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCAAGGCAGAATTGATAGAAAGACTTGCCACCCAGCAATCGCACATTCCCg                              <  1:1261486/150‑1 (MQ=255)
                                                                                                                         gTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGACCCGGAGGGATCATGACCAAGTCAGAATTGATAGAAAGACTGGCCACCCAGCAATCGCACATTCCCGc                             >  2:267103/1‑150 (MQ=255)
                                                                                                                         gTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCAAGTCAGAATTGATAGCAAGACTTGCCACCCAGCAATCGCACATTCCCGc                             >  1:735738/1‑150 (MQ=255)
                                                                                                                           ccTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCAAGTCAGAATTGATAGAAAGACTTGCCACCCAGCAATCGCACATTCCCGCCa                           <  1:906362/150‑1 (MQ=255)
                                                                                                                             tGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCAAGTCAGAATTGATAGAAAGACTTGCCACCCAGCAATCGCACATTCCCGCCAAg                         <  2:517037/150‑1 (MQ=255)
                                                                                                                               tAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCAAGTCAGAATTGATAGAAAGCCTTGCCACCCAGCAATCGCACATTCCCGCCAAGAc                       >  1:1678504/1‑150 (MQ=255)
                                                                                                                               tAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCAAGTCAGAATTGATAGAAAGACTTGCCACCCAGCAATCGCACATTCCCGCCAAGAc                       <  1:1409972/150‑1 (MQ=255)
                                                                                                                                 aTCAAGCACTAAGGGCGGCTACGGCCGCCCTTAAACAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCAAGTCAGAATTGATAGAAAGACATGCCACCCCGCAAACGCACATTCCCGCCAAGACgg                     >  2:949942/1‑150 (MQ=255)
                                                                                                                                   cAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCAAGTCAGAATTGATAGAAAGACTTGCCACCCAGCAATCGCACATTCCCGCCAAGACGGtt                   >  1:1113454/1‑150 (MQ=255)
                                                                                                                                   cAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCAAGTCAGAATTGATAGAAAGACTTGCCACCCAGCAATCGCACATTCCCGCCAAGACGGtt                   >  2:806767/1‑150 (MQ=255)
                                                                                                                                   cAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCAAGTCAGAATTGATAGAAAGACTTGCCACCCAGCAATCGCACATTCCCGCCAAGACGGtt                   <  2:229335/150‑1 (MQ=255)
                                                                                                                                    attgattAAGGGCGGCCGTAGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCAAGTCAGAATTGATAGAAAGACTTGCCACCCAGCAATCGCACATTCCCGCCAAGACGGTTg                  >  2:527011/7‑150 (MQ=255)
                                                                                                                                    aaGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCAAGTCAGAATTGATAGAAAGACTTGCCCCCCAGCAATCGCACATTCCCGCCAAGACGGTTg                  >  2:571155/1‑150 (MQ=255)
                                                                                                                                    aaGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCAAGTCAGAATTGATAGAAAGACTTGCCACCCAGCAATCGCACATTCCCGCCAAGACGGTTg                  >  1:957169/1‑150 (MQ=255)
                                                                                                                                      gCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCAAGTCAGAATTGATAGAAAGACTTGCCACCCAGCAATCGCACATTCCCGCCAAGACGGTTGaa                >  1:1491999/1‑150 (MQ=255)
                                                                                                                                       gattAAGGGCGGCCGTAGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCAAGTCAGAATTGATAGAAAGACTTGCCACCCCGCAATCGCACATTCCCGCCAAGACGGTTGAAg               >  1:1002656/4‑150 (MQ=255)
                                                                                                                                       gattAAGGGCGGCCGTAGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATCACCAAGTCAGAATTGATAGAAAGACTTGCCACCCAGCAATCGCACATTCCCGCCCAGACGGTTGAAg               >  2:343005/4‑150 (MQ=255)
                                                                                                                                       cACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCAAGTCAGAATTGATAGAAAGACTTGCCACCCAGCAATCGCACATTCCCGCCAAGACGGTTGAAg               <  2:1379611/150‑1 (MQ=255)
                                                                                                                                       cACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCAAGTCAGAATTGATAGAAAGACTTGCCACCCAGCAATCGCACATTCCCGCCAAGACGGTTGAAg               <  1:802781/150‑1 (MQ=255)
                                                                                                                                        aCTAAGGGCGGCTACTGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCGTTAAGGAACCGGAGGAATCATGACCAAGTCAGATTTGATAGAAAGACTTGCCACCCAGTAATCGCACATTCCCGCCAAGACGGGTGAAGa              <  1:309502/150‑1 (MQ=255)
                                                                                                                                           aaGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCAAGTCAGAATTGATAGAAAGACTTGCCACCCAGCAATCGCACATTCCCGCCAAGCCGGTTGAAGATGc           >  1:852408/1‑150 (MQ=255)
                                                                                                                                           aaGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCAAGTCAGAATTGATAGAAAGACTTGCCACCCAGCAATCGCACATTCCCGCCAAGACGGTTGAAGATGc           <  2:1200932/150‑1 (MQ=255)
                                                                                                                                           aaGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCAAGTCAGAATTGATAGAAAGACTTGCCACCCAGCAATCGCACATTCCCGCCAAGACGGTTGAAGATGc           >  2:415629/1‑150 (MQ=255)
                                                                                                                                           aaGGGCGGCCGTAGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCAAGTCAGAATTGATAGAAAGACTTGCCAACCAGCAATCGCACATTCCCGCCAAGACGGTGGAAGATGc           >  1:1530272/1‑150 (MQ=255)
                                                                                                                                               gcggcTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCAAGTCAGAATTGATAGAAAGACTTGCCACCCAGCAATCGCACATTCCCGCCAAGCCGGTTGAAGATGCAGTa       >  2:404650/1‑150 (MQ=255)
                                                                                                                                                 ggcTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCAAGTCAGAATTGATAGAAAGACTTGCCACCCAGCAATCGCACATTCCCGCCAAGACGGTTGAAGATGCAGTaaa     <  2:1208948/150‑1 (MQ=255)
                                                                                                                                                  gcTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCAAGTCAGAATTGATAGAAAGACTTGCCACCCAGCAATCGCACATTCCCGCCAAGACGGGTGAAGATGCAGTaaaa    >  1:563450/1‑150 (MQ=255)
                                                                                                                                                   cTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCAAGTCAGAATTGATAGAAAGACTTGCCACCCAGCAATCGCACATTCCCGCCAAGACGGTTGAAGATGCAGTAAAag   <  2:894001/150‑1 (MQ=255)
                                                                                                                                                    tACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCAAGTCAGAATTGATAGAAAGACTTGCCACCCAGCAATCGCACATTCCCGCCAAGACGGTTGAAGATGCAGTAAAaga  >  1:1037106/1‑150 (MQ=255)
                                                                                                                                                    tACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGATTAATTTGCATTTAAGGAACCGGAGGAATCATGACCAAGTCAGAATTGATAGAAAGACTTGCCACCCAGCAATCGCACATTCCCGCCAAGACGGTTGAAGATGCAGTAAAaga  <  1:1359253/150‑1 (MQ=255)
                                                                                                                                                    tACGGCCGCCCTTAATCAATGCAGAAACAGCCGCCGCTTAATTTGCCTGTAAGGAACCGGAGGAATCATGCCCAAGTCAGCATTGATAGAAAGACGTGCGCCCCGGCAATCGCACATTACCGCCAAGCCGGTTTCATATGAAGAAAAaga  >  2:297138/1‑150 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
CAAACTTCTCCAACAACGCAATGGCTGAAGCTTTCAAAGCAGCTAAAGGCGAGTAATTCTCTGACTCTTCGGGATTTTTATTCCGAAGTTTGTTGAGTTTACTTGACAGATTGCAGGTTTCGTCCTGTAATCAAGCACTAAGGGCGGCTACGGCCGCCCTTAATCAATGCAGCAACAGCAGCCGCTTAATTTGCCTTTAAGGAACCGGAGGAATCATGACCAAGTCAGAATTGATAGAAAGACTTGCCACCCAGCAATCGCACATTCCCGCCAAGACGGTTGAAGATGCAGTAAAAGA  >  NC_000913/963613‑963910

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: