| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,129,394 | G→C | 6.1% | intergenic (+20/+20) | murJ → / ← flgN | putative lipid II flippase/export chaperone for FlgK and FlgL |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,129,394 | 0 | G | C | 6.1% | 305.7 / 9.6 | 99 | intergenic (+20/+20) | murJ/flgN | putative lipid II flippase/export chaperone for FlgK and FlgL |
| Reads supporting (aligned to +/- strand): ref base G (51/42); new base C (3/3); total (54/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.63e-01 | |||||||||||
Only 100 of 121 total aligned reads displayed.
GTCATTGGGTACCATGCCCTGGCGTTTACTGCGTTTAATGGCGGTCGTGCTGGCGGGGATTGCCGCGTACTTCGCTGCACTGGCGGTACTGGGCTTCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGACCGTTCGCCCCATATAGCGTCGGTTCCTGATGCGGTTTCAACATTTCCAGCGCCTGTTGATTGCGCTCAATCTGTCCTTCCAGT > NC_000913/1129245‑1129543 | gTCATTGGGTACCATGCCCTGGCGTTTACTGCGTTTAATGGCGGTCGTGCTGGCGGGGATTGCCGCGTACTTCGCTGCACTGGCGGTACTGGGCTTCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑tgcag > 1:740604/1‑150 (MQ=255) cATTGGGTACCATGCCCTGGCGTTTACTGCGTTTAATGGCGGTCGTGCTGGCGGGGATTGCCGCGTACTTCGCTGCACTGGCGGTACTGGGCTTCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑tgcagtg > 1:340933/1‑150 (MQ=255) cATTGGGTACCATGCCCTGGCGTTTACTGCGTTTAATGGCGGTCGTGCTGGCGGGGATTGCCGCGTACTTCGCTGCACTGGCGGTACTGGGCTTCAAAGTTAAAGAATTTGCCCGACGGACGGTGTAAGAATGCATTCAGGCC‑tgcagtg > 2:1570871/1‑150 (MQ=255) cATTGGGTACCATGCCCTGGCGTTTACTGCGTTTAAAGGCGGTCGTACTGGCGGGGATTGCCGCGTACTTCGCTGCACTGGCGGTACTGGGCTTCAAAGTAAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑tgcaggg > 1:1506043/1‑148 (MQ=255) aTTGGGTACCATGCCCTGGCGTTTACTGCGTTTAATGGCGGTCGTGCTGGCGGGGATTGCCGCGTACTTCGCTGCACTGGCGGTACTGGGCTTCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑tgcagtgc > 1:1419121/1‑150 (MQ=255) aTTGGGTACCATGCCCTGGCGTTTACTGCGTTTAATGGCGGTCGGGCTGGCGGGGATTGCCGCGTACTTCGCTGCACTGGCGGTACTGGGCTTCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑tgcagtgc < 2:1673775/150‑1 (MQ=255) tGGGTACCATGCCCTGGCGTTTACTGCGTTTAATGGCGGTCGTGCTGGCGGGGATTGCCGCGTACTTCGCTGCACTGGCGGTACTGGGCTTCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑tgcagtgcag > 1:560985/1‑150 (MQ=255) tGGGTACCATGCCCTGGCGTTTACTGCGTGTAATGGCGGTCGTGCTGGCGGGGATTGCCGCGTACTACGCGGCACTGGCGGTACTGGGCTTCAAAGTTAAAGAATTTGCCCGCCGGACGGCGTAACAATGCATTCCGGCC‑tgcagtgcag < 2:1140865/150‑1 (MQ=255) gTACCATGCCCTGGCGTTTACTGCGTTTAATGGCGGTCGTGCTGGCGGGGATTGCCGCGTACTTCGCTGCACTGGCGGTACTGGGCTTCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCACTGCAGGcc < 1:921135/150‑1 (MQ=255) aCCATGCCCTGGCGGTTACTGCGTTTAATGGCGGTCGTGCTGGCGGGGATTGCCGCGTACTTCGCTGCACTGGCGGTACTGGGCTTCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCACTGCAGGCCgg < 2:1109839/150‑1 (MQ=255) aCCATGCCCGGGCGTTTACTGCGTTTAATGGCGGTCGTGCTGGCGGGGATTGCCGCGTACTTCGCTGCACTGGCGGTACTGGGCTTCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCgg < 1:624638/150‑1 (MQ=255) cATGCCCTGGCGTTTACTGCGTTTAATGGCGGTCGTGCTGGCGTGGATTGCCTCGTACTTAGATTCACAGGCGGTACTGGGATTCAAAGTTAAAGAATTTGCCCGCCGGACGGAGTAACAATGCATTCCTGCC‑TGCAGAGCAGGCCGgag > 2:1686484/1‑150 (MQ=255) tGCCCTGGCGTTTACTGCGTTTAATGGCGGTCGTGCTGGCGGGGATTGCCGCGTACTTCGCTGCACTGGCGGTACTGGGCTTCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCACTGCAGGCCGgaatg < 2:161731/150‑4 (MQ=255) gCCCTGGCGTTTACTGCGTTTAATGGCGTTCGTGCTGGCGGGGATTTCAGCGTACTTCGCTGCACTGGCGGTACTTTTCTTCAAAGTTAAAGAATTTGCGCGGCGTACGGTGTAACATTGCATTCCGGCA‑TTCAGTGCAGGCCGGAGATa < 2:793264/150‑1 (MQ=255) cTGGCGTTTACTGCGTTTAATGGCGGTCGTGCTGGCGGGGATTGCCGCGTACTTCGCTGCACTGGCGGTACTGGGCTTCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCTGCC‑TGCAGTGCAGGCCGGAGATAATc > 2:1389516/1‑150 (MQ=255) cTGGCGTTTACTGCGTTTAATGGCGGTCGTGCTGGCGGGGATTGCCGCGTACTTCGCTGCACTGGCGGTACTGGGCTTCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATc > 2:1291481/1‑150 (MQ=255) ggCGTTTACTGCGTTTAATGGCGGTCGTGCTGGCGGGGATTGCCGCGTACTTCGCTGCACTGGCGGTACTGGGCTTCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCtt > 1:718831/1‑150 (MQ=255) gCGTTTACTGCGTTTAATGGCGGTCGTGCTGGCGGGGATTGCCGCGTACTTCGCTGCACTGGCGGTACTGGGCTTCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTc < 1:1600374/150‑1 (MQ=255) gCGTTTACTGCGTTTAATGGCGGTCGTGCTGGCGGGGATTGCCGCGTACTTCGCTGCACTGGCGGTACTGGGCTTCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTc < 2:1580152/150‑1 (MQ=255) cGTTTACTGCGTTTAATGGCGGTCGTGCTGGCGGTGATTGCCGCGTACTTCGCTGCACTGGCGGTACTGGGCTTCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCa < 1:841428/150‑1 (MQ=255) tACTGCGTTTAATGGCGGTCGTGCTGGCGGGGATTGCCGCGTACTTCGCTGCACTGGCGGTACTGGGCTTCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATc > 1:1125981/1‑150 (MQ=255) gCGTTTAATGGCGGTCGTGCTGGCGGGGATTGCCGCGTACTTCGCTGCACTGGCGGTACTGGGCTTCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGaaa > 1:1062116/1‑150 (MQ=255) tAATGGCGGTCGTTCTGGCGGTGATTGCCGCGTACTTCGCTGCACTGGCGGTACTGGGCTTCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCttt < 2:548372/150‑1 (MQ=255) tAATGGCGGTCGTGCTGGCGGGGATTGCCGCGTACTTCGCTGCCCTGGCGGTACTGGGCTTCAAAGTTAAAGACTTTGCCCGACGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGAAGGCCGGAGATAATCTTCAGATAGAAATCttt > 1:97612/1‑150 (MQ=255) aaTGGCGGTCGTGCTGGCGGGGATTGCCGCGTACTTCGCTGCACTGGCGGTACTGGGCTTCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGgaga < 1:1630249/127‑1 (MQ=255) aaTGGCGGTCGTGCTGGCGGGGATTGCCGCGTACTTCGCTGCACTGGCGGTACTGGGCTTCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGgaga > 2:1630249/1‑127 (MQ=255) ggCGGTCGTGCTGGCGGGGATTGCCGCGTACTTCGCTGCACTGGCGGTACTGGGCTTCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTAc > 1:797607/1‑150 (MQ=255) gCTGGCGGGGATTGCCGCGTACTTCGCTGCACTGGCGGTACTGGGCTTCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGAt > 2:562800/1‑150 (MQ=255) gCTGGCGGGGATTGCCGCGTACTTCGCTGCACTGGCGGTACTGGGCTTCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGAt < 1:1077509/150‑1 (MQ=255) ggCGGGGATTGCCGCGTACTTCGCTGCACTGGCGGTACTGGGCTTCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATggg > 1:323287/1‑150 (MQ=255) gCGGGGATTGCCGCGTACTTCGCTGCACTGGCGGTACTGGGCTTCAAAGTTAAAGTATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGgt < 1:887502/150‑1 (MQ=255) ggATTGCCGCGTACTTCGCTGCACTGGCGGTACTGGGCTTCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGgttgtt > 2:1658383/1‑150 (MQ=255) gATTGCCGCGTACTTCGCTGCACTGGCGGTACTGGGCTTCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGttgttg < 2:340933/150‑1 (MQ=255) aTTGCCGCGTACTTCGCTGCACTGGCGGTACTGGGCTTCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAAGAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGttgttgt > 1:177291/1‑149 (MQ=255) aTTGCCGCGTACTTCGCTGCACTGGCGGTACTGGGCTTCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGa > 1:574110/1‑150 (MQ=255) tGCCGCGTACTTCGCTGCACTGGCTTTACTGGGATTCAAAGTTAAATAATTTGCCCGCCGGACGGTGTAACATTGCTTTCCGTCC‑TGCAGTGCAGGCCGGAGTTAATCTTCAGATCGATATCTTTTTACCGCCGCTATGTGTTGTTGAgg < 1:807537/150‑1 (MQ=255) gCCGCGTTCTTCGCTGCACTGGCGGTACTGGGCTTCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGt > 2:1363970/1‑150 (MQ=255) gCCGCGTACTTCGCTGCACTGGCGGAACTGGGCTTCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGt < 2:15174/150‑1 (MQ=255) gTACTTCGCTGCACTGGCGGTACTGGGCTTCAAAGTTAAAGAATTTGCCCGCCGGACGGGGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGAc < 1:1224973/150‑1 (MQ=255) tACTTCGCTGCACTGGCGGTACTGGGCTTCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGAcc < 2:1269341/150‑1 (MQ=255) cTTCGCTGCACTGGCGGTACTGGGCTTCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGACCGt > 1:1260948/1‑150 (MQ=255) ttCGCTGCACTGGCGGTACTGGGCTTCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAgg < 1:1643646/140‑1 (MQ=255) gCTGCACTGGCGGTACTGGGCTTCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGACCGTTCGc < 2:578302/150‑1 (MQ=255) cTGCACTGGCGGTACTGGGCTTCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGACCGTTCGcc > 2:578863/1‑150 (MQ=255) gcacgcgCGGTACTGCGCCTCCTCGTTAATGAATTTGCCCGCTGGACGCTGTAACATTGCATTCCGGCC‑TGCAGCGCAGGCCGGAGTTAATCTTCATATCGAAATCTTTTTACCGCCGCGATGGGTGGTTGAGGTCTGACCGTTCGcccc < 2:1075265/144‑1 (MQ=255) gCACTGGCGGTACTGGGCTTCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCGTCAGCTCGAAATCTTTTTACCGCCGCGATGGGGTGTTGCGGTCTGACCGTTCGcccc > 2:959637/1‑150 (MQ=255) gCACTGGCGGTACTGGGCTTCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑GGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGACCGTTCGcccc < 2:1542668/150‑1 (MQ=255) ggTACTGGGCTTCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATATTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGACCGTTCGCCCCATATAGCg > 2:1204158/1‑150 (MQ=255) cTGGGCTTCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGACCGTTCGCCCCATATAGCGTCgg > 1:442782/1‑150 (MQ=255) cTGGGCTTCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGACCGTTCGCCCCATATAGCGTCgg > 1:365845/1‑150 (MQ=255) cTTCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGACCGTTCGCCCCATATAGCGTCGGTTCCt < 1:381373/150‑1 (MQ=255) cTTCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGACCGTTCGCCCCATATAGCGTCGGTTCCt > 1:217389/1‑150 (MQ=255) ttCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGACCGTTCGCCCCATATAGCGTCGGTTCCTg < 1:809838/150‑1 (MQ=255) ttCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGACCGTTCGCCCCATATAGCGTCGGTTCCTg < 2:964426/150‑1 (MQ=255) ttCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGACAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGACCGTTCGCCCCATATAGCGTCGGTTCCTg > 2:579656/1‑150 (MQ=255) aGTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACGCCCGCATTGGGTTGTTATGTGATCACCTTACGCCCAATATAGCTACGTTTCGTTATGCg > 2:1500035/1‑150 (MQ=255) aGTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTTGTGAGGTCTGACCGTTCGCCCCATATAGCGTCGGTTCCTGATGCg < 2:206119/150‑1 (MQ=255) gTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGACCGTTCGCCCCATATAGCGTCGGTTCCTGAAGCgg > 1:317284/1‑150 (MQ=255) gTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCGTTTTACCGCCGCGAGGGGTTGTTGAGGTCTGACCGTTCGCCCCATATTGCGTCGGTTCCTGATGCgg > 2:894946/1‑150 (MQ=255) tAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGGTGTTGAGGTCTGACCGTTCGCCCCATATAGCGTCGGTTCCTGATGCGGtt > 2:1299623/1‑150 (MQ=255) aaaGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGACCGTTCGCCCCATATAGCGTCGGTTCCTGATGCGGttt > 1:988302/1‑150 (MQ=255) aaaGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGACCGTTCGCCCCATATAGCGTCGGTTCCTGATGCGGttt > 1:1256958/1‑150 (MQ=255) aaGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGACCGTTCGCCCCATATAGCGTCGGTTCCTGATGCGGTTTc > 2:1473943/1‑150 (MQ=255) aaGAATTTGCCCGCCGGAAGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCATCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGACCGTTCGCCCCATATAGCGTCGGTTCCTGATGCGGttta > 1:1249199/1‑149 (MQ=255) aaTTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGACCGTTCGCCCCATATAGCGTCGGTTCCTGATGCGGTTTCAAc < 1:53476/150‑1 (MQ=255) tttCCCCGCCGTAGGGTGTAA‑AATGCCTTCCGGCCGTCCAGTGCTGGCTGTTTTTAA‑CTTTAATTCCTAATTTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGACCGTTCGCCCCATATAGCGTCGGTTCCTGATGCGGTTTCAACAtt < 1:1500035/150‑1 (MQ=255) gCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGACCGTTCGCCCCATATAGCGTCGGTTCCTGATGCGGTTTCAACATTTc < 2:1715004/150‑1 (MQ=255) gCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGACCGTTCGCCCCATATAGCGTCGGTTCCTGATGCGGTTTCAACATTTc > 2:325781/1‑150 (MQ=255) cccGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGACCGTTCGCCCCATATAGCGTCGGTTCCTGATGCGGTTTCAACATTTcc > 1:1013448/1‑150 (MQ=255) ggACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGACCGTTCGCCCCATATAGCGTCGGTTCCTGATGCGGTTTc > 1:946799/1‑135 (MQ=255) ggACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGACCGTTCGCCCCATATAGCGTCGGTTCCTGATGCGGTTTc < 2:946799/135‑1 (MQ=255) aCGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGATATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGCCCGTTCGCCCCATATAGCGTCGGTTCCTGATGCGGTTTCAACATTTCCAGCGCCTg > 2:1621600/1‑150 (MQ=255) tgtAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGACCGTTCGCCCCATATAGCGTCGGTTCCTGATGCGGTTTCAACATTTCCAGCGCCTGTTGa > 1:913300/1‑150 (MQ=255) tgtAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCAATGGGTTGTTGAGGTCTGACCGTTCGCCCCATATAGCGTCGGTTCCTGATGCGGTTTCAACATTTCCAGCGCCTGTTGa < 2:1419121/150‑1 (MQ=255) gtAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGACCGTTCGCCCCATATAGCGTCGGTTCCTGATGCGGTTTCAACATTTACAGCGCCTGTTGAt > 2:1179018/1‑150 (MQ=255) gtAACAAGGCATTCCGGCC‑TGCAGTGCAGGCCTGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGACCGTTCGCCCCATATAGCGTCGGTTCCTGATGCGGTTTCAACATTTCCAGCGCCTGTTGAt < 1:1516923/150‑1 (MQ=255) aaaCAATGCATTCCGGCC‑TGCAGTTCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCTCCGCGATTGGTTGTTGAGGTCTGACCGTTCGCCCCATATAGCGTCGGTTCCTGATGCGGTTTCAACTTTTCCAGCGACTGTTGAtt < 1:707084/149‑1 (MQ=255) aCAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGAGCGAAATCTTTTTACCGCCGCGATGGGTTGGTGAGGTCTGACCGTTCGCCCCATATAGCGTCGGTTCCTGATGCGGTTTCAACATTTCCAGCGCCTGTTGATTgc < 2:97612/150‑1 (MQ=255) cAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGATATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGACCGTTCGCCCCATATAGCGTCGGTTCCTGATGCGGTTTCAACATTTCCAGCGCCTGTTGATTgcg > 2:53016/1‑150 (MQ=255) aaTGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGACCGTTCGCCCCATTTATGGTCGGGTACTGATGCGGTTTAAACATTTCAAGCGGCTGTTGATTgcgc > 2:865192/1‑150 (MQ=255) aTGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGACCGTTCGCCCCATATAGCGTCGGTTCCTGATGCGGTTTCAACATTTCCAGCGCCTGTTGATTGCGCt < 2:574110/150‑1 (MQ=255) gCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGACCGTTCGCCCCATATAGCGTCGGTTCCTGATGCGGTTTCAACATTTCCAGCGCCTGTTGATTGCGCTCa > 2:907100/1‑150 (MQ=255) tctCCGGCC‑TGCACTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGACCGTTCGCCCCATATAGCGTCGGTTCCTGATGCGGTTTCAACATTTCCAGCGCCTGTTGATTGCGCTCaaa > 2:761378/3‑149 (MQ=255) tCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGACCGTTCGCCCCATATAGCGTCGGTTCCTGATGCGGTTTCAACATTTCCAGCGCCTGTTGATTGCGCTCAATCt > 2:1684178/1‑150 (MQ=255) ccGGCC‑TGCACTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGACCGTTCGCCCCATATAGCGTCGGTTCCTGATGCGGTTTCAACATTTCCAGCGCCTGTTGATTGCGCTCAATCTg > 1:1491135/1‑150 (MQ=255) ggCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGCTCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGACCGTTCGCCCCATATAGCGTCGGTTCCTGCTGCGGTTTCAACATTTCCAGCGCCTGTTGAGTGCGCTCAATCTGTc > 1:1620103/1‑150 (MQ=255) ggCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGACCGTTCGCCCCATATAGCGTCGGTTCCTGATGCGGTTTCAACATTTCCAGCGCCTGTTGATTGCGCTCAATCTGTc < 1:372599/150‑1 (MQ=255) cc‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGACCGTTCGCCCCATATAGCGTCGGTTCCTGATGCGGTTTCAACATTTCCAGCGCCTGTTGATTGCGCTCAATCTGTCCt > 1:1013314/1‑150 (MQ=255) tcagtgcagGCCGGAGATAAGATTCAGATCGAAATCTTTTTACCGCCGCGATGGCTTGTTGAGGTCTGACCGTTCGCCCCATATAGCGTCGGTTCCTGATGCGGTTTCAACATTTCCAGCGCCTGTTGATTGCGCTCAATCTGTCCTTcc < 2:282976/149‑1 (MQ=255) gcagtgcagGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGACCGTTCGCCCCATATAGCGTCGGTTCCTGATGCGGTTTCAACATTTCCAGCGCCTGTTGATTGCGCTCAATCTGTCCTTcc > 2:1125990/1‑150 (MQ=255) gcagtgcagGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGACCGTTCGCCCCATATAGCGTCGGTTCCTGATGCGGTTTCAACATTTCCAGCGCCTGTTGATTGCGCTCAATCTGTCCTTcc > 2:1289568/1‑150 (MQ=255) gcagtgcagGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGAGGGGTTGTTGAGGTCTGACCGTTCGCACCATATAGCGTCGGTTCCTGATGCGGTTTCAACATTTCCAGCGCCTGTTGATTGCGCTCAATCTGTCCTTcc > 2:1514671/1‑150 (MQ=255) gcagtgcagGCCGGAGATAAACTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGACCGTTCGCCCCATATAGCGTCGGTTCCTGATGCGGTTTCAACATTTCCAGCGCCTGTTGATTGCGCTCAATCTGTCCTTcc < 2:463012/150‑1 (MQ=255) agtgcagGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGACCGTTCGCCCCATATAGCGTCGGTTCCTGATGCGGTTTCAACATTTCCAGCGCCTGTTGATTGCGCTCAATCTGTCCTTCCAg < 2:365845/150‑1 (MQ=255) agtgcagGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGACCGTTCGCCCCATATAGCGTCGGTTCCTGATGCGGTTTCAACATTTCCAGCGCCTGTTGATTGCGCTCAATCTGTCCTTCCAg < 1:1291481/150‑1 (MQ=255) agtgcagGCCGGAGATAATCTTCAGAGCGAAATCTTATTCCCGCCGCGATGGGGTGTTGAGGTCTGACCGTTCGCCCCATATAGCGTCGGTTCCTGATGCGGTTTCAACATTGCCAGCGCCTGTTGATTGCGCTCAATCTGTCCTTCCAg < 1:856719/150‑1 (MQ=255) gtgctgGGCGGAGATTATCTTCAGATCGAATTCTTTTTACCGCCGCGATGGGTTGTTGTGGTCTGTTCGTTCGCCCCATTTAGCGTCTGTTCCTGATGCGGTTTCAACATTTCCAGCGCCTGTTGATTGCGCTCAATCTGTCCTTCCAGt < 1:1674156/150‑1 (MQ=255) gtgcagGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGACCGTTCGCCCCATATAGCGTCGGTTCCTGATGCGGTTTCAACATTTCCAGCGCCTGTTGATTGTGTTCAATCTGTCCTTCCAGt > 2:461595/1‑150 (MQ=255) gtgcagGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGACCGTTCGCCCCATATAGCGTCGGTTCCTGATGCGGTTTCAACATTTCCAGCGCCTGTTGATTGCGCTCAATCTGTCCTTCCAGt > 1:586866/1‑150 (MQ=255) gtgcagGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGACCGTTCGCCCCATATAGCGTCGGTTCCTGATGCGGTTTCAACATTTCCAGCGCCTGTTGATTGCGCTCAATCTGTCCTTCCAGt > 2:1408429/1‑150 (MQ=255) | GTCATTGGGTACCATGCCCTGGCGTTTACTGCGTTTAATGGCGGTCGTGCTGGCGGGGATTGCCGCGTACTTCGCTGCACTGGCGGTACTGGGCTTCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAACAATGCATTCCGGCC‑TGCAGTGCAGGCCGGAGATAATCTTCAGATCGAAATCTTTTTACCGCCGCGATGGGTTGTTGAGGTCTGACCGTTCGCCCCATATAGCGTCGGTTCCTGATGCGGTTTCAACATTTCCAGCGCCTGTTGATTGCGCTCAATCTGTCCTTCCAGT > NC_000913/1129245‑1129543 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |