| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,248,561 | G→A | 12.1% | A185V (GCC→GTC) | dhaM ← | putative dihydroxyacetone‑specific PTS enzymes: HPr, EI components |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,248,561 | 0 | G | A | 12.1% | 241.2 / 17.4 | 92 | A185V (GCC→GTC) | dhaM | putative dihydroxyacetone‑specific PTS enzymes: HPr, EI components |
| Reads supporting (aligned to +/- strand): ref base G (40/39); new base A (4/7); total (46/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.23e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.06e-01 | |||||||||||
CAGCTGACGGAAAGCGATCAGTGCCTCTTCAGCTTCTGGCCCTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCGTTACGGTTTTTTATGACCACCGCCAGAGAACGGGCTTCTTCATCGTACGCAGGACATGTGTCAGAGATTTCAGTGTCGGAGGACGGTAAACCC > NC_000913/1248413‑1248710 | cagcTGACGGAAAGCGATCAGTGCCTCTTCAGCTTCTGGCCCTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGc < 1:716593/150‑1 (MQ=255) gcTGACGGAAAGCGATCAGTGCCTCTTCAGCTTCTGGCCCTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGACGTTTTTTTCCAGCAACATATCGGCAt > 1:1173367/1‑150 (MQ=255) tGACGGAAAGCGATCAGTGCCTCTTCAGCTTCTGGCCCTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTa > 2:346129/1‑150 (MQ=255) tGACGGAAAGCGAGCAGTGCCTCTTCAGCTTCTGGCCCTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTa < 1:1266223/150‑1 (MQ=255) gACGGAAAGCGATCAGTGCCTCTTCAGCTTCTGGCCCTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTaa > 2:120157/1‑150 (MQ=255) aCGGAAAGCGATCAGTGCCTCTTCAGCTTCTGGCCCTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTaaa < 1:155294/150‑1 (MQ=255) cGGAAAGCGATCAGTGCCTCTTCAGCTTCTGGCCCTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATTCTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATAGGCATTAAAt > 2:286689/1‑150 (MQ=255) cGGAAAGCGATCAGTGCCTCTTCAGCTTCTGGCCCTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACACATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAAt > 1:241846/1‑150 (MQ=255) gAAAGCGATCAGTGCCTCTTCAGCTTCTGGCCCTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGACATTTAATgc < 1:1726298/150‑2 (MQ=255) aaaGCGATCAGTGCCTCTTCAGCTTCTGGCCCTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTc < 1:437974/150‑1 (MQ=255) gCGATCAGTGCCTCTTCAGCTTCTGGCCCTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGAt > 2:732464/1‑150 (MQ=255) cGATCAGTGCCTCTTCAGCTTCTGGCCCTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGACATTTAATGCCGATa < 2:588145/150‑1 (MQ=255) gATCAGTGCCTCTTCAGCTTCTGGCCCTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATaa > 1:1694804/1‑150 (MQ=255) gATCAGTGCCTCTTCAGCTTCTGGCCCTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGACATTTAATGCCGATat < 1:760024/150‑2 (MQ=255) aTCAGTGCCTCTTCAGCTTCTGGCCCTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTT‑CAGCAACATATCGGCATTAAATGTCGATAAgg < 1:13301/150‑1 (MQ=255) tCAGTGCCTCTTCAGCTTCTGGCCCTTTCGCAATAATTCGCATCGTTTCGTTATAGCGAACTTGTAGTATAGCAATCTGGTTAATACTCTCTGGTGTGACTCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAgg < 1:195983/150‑1 (MQ=255) tCAGTGCCTCATCAGAATCTGGCCCTTTCGCAATCAGGCGCAGCGTATCGTTATAGAGTAATTGTAGTAACTCAATCTGTTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTACCAGCAACATATCGACATTTAATGCCGATatgt < 2:227050/150‑4 (MQ=255) aGTGCCTCTTCAGCTTCTGGCCCTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGtt > 2:868878/1‑149 (MQ=255) aGTGCCTCTTCAGCTTCTGGCCCTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGACATTTAATGCCGATatgttg > 2:165193/1‑145 (MQ=255) gTGCCTCTTCAGCTTCTGGCCCTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGtat > 2:1126718/1‑150 (MQ=255) tGCCTCTTCAGCTTCTGGCCCTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACTCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGtata < 1:104219/150‑1 (MQ=255) tGCCTCTTCAGCTTCTGGCCCTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGACATTTAATGCCGATatgttgct < 2:936297/150‑8 (MQ=255) ctctTCAGCTTCTGGCGCTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCACTGGTGTGACGCATTTGCCGTTTTTTTCCAGCATCATATCGGCATTAAATGTCGATAAGGTATAAAc < 2:337293/150‑1 (MQ=255) tctTCAGCTTCTGGCCCTTTCGCAATCAGGCGCAGCGTATCGTTATAGCTAACTTGAAGTAACGCAATCTGGTTAATACTCTCTGGTGTTACGCATTTGCCGTTTTTTTCCAGCAACATCTCGGCATTAAATGTCGATAAGGTATAAAcc < 1:337848/150‑1 (MQ=255) ctTCAGCTTCTGGCCCTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTACAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCa > 2:1401461/1‑150 (MQ=255) ttCAGCTTCTGGCCCTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCac > 2:1275236/1‑149 (MQ=255) cAGCTTCTGGCCCTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGACATTAAATGTCGATAAGGTATAAACCAGcc > 2:821471/1‑150 (MQ=255) gCTTCTGGCCCTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCgg < 1:623804/150‑1 (MQ=255) cccTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGACATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCgg > 1:1120346/1‑150 (MQ=255) ccTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGa < 1:732464/150‑1 (MQ=255) cTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGAc < 2:1184119/150‑1 (MQ=255) cTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGAc < 2:643552/150‑1 (MQ=255) tttCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACg < 1:55425/150‑1 (MQ=255) ttCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGt > 2:1375175/1‑150 (MQ=255) ttCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGt > 2:1368447/1‑150 (MQ=255) cGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGTCATTAAATGTCGATAAGGTTTAAAACATCCGGGAGGCCGGACGTaa > 1:1216326/1‑149 (MQ=255) cGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGTCCGGACGTAc > 1:213357/1‑150 (MQ=255) cGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAAAACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTAAAACCCAGCCGGGAGGCCGGACGTAc > 1:156536/1‑150 (MQ=255) aTCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGc > 1:428138/1‑150 (MQ=255) ggCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGc < 1:1654223/150‑1 (MQ=255) cgcAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCg > 2:1495569/1‑150 (MQ=255) gtaGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATAGTCATTAAATGTAGATAAGGTATAAACCAGCCGGGAGGCAGGACGTACATGCAGGCCGt > 1:727184/3‑150 (MQ=255) cAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCGtt > 2:210861/1‑150 (MQ=255) cAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCGtt < 1:1265589/150‑1 (MQ=255) cGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCGTTACGGtttt < 1:346129/150‑1 (MQ=255) gTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCGTGACGGttttt > 2:1222824/1‑150 (MQ=255) ttATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCGTTACGGtttttt < 2:1200753/150‑1 (MQ=255) tataGCGAACTTGTAGTAACGCAATCTGGGTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTACATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCGTTACGGTTTTTTa < 1:1087139/150‑1 (MQ=255) gCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATTTCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCGTTACGGTTTTTTATGac > 2:1516895/1‑150 (MQ=255) gCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCGTTACGGTTTTTTATGac > 2:1466378/1‑150 (MQ=255) cGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCGTTACGGTTTTTTATGacc < 1:1691306/150‑1 (MQ=255) cGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGACATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCGTTACGGTTTTTTATGacc < 2:1120346/150‑1 (MQ=255) tGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCAGTTACGGTTTTTTATGACCACCGcc > 1:198882/1‑150 (MQ=255) gtagtaACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCGTTACGGTTTTTTATGACCACCGCCa > 2:1335571/1‑150 (MQ=255) tagtaACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCGTTACGGTTTTTTATGACCACCGCCag < 2:1168427/150‑1 (MQ=255) agtaACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATGTCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCGTTACGGTTTTTTATGACCACCGCCaga > 2:593274/1‑150 (MQ=255) gtaACGCAATCTGGTTAATACTCTCTGGTGTGACTCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCTGGAGGCCGGCCGTACATGCAGGCCGTTACTGGTGTTTATGCCCACCGCCtgag > 2:90172/1‑150 (MQ=255) aTCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCGTTACGGTTTTTTATGACCACCGCCAGAGAACGGGct < 1:1495569/150‑1 (MQ=255) tCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCGTTACGGTTTTTTATGACCACCGCCAGAGAACGGGctt > 1:515939/1‑150 (MQ=255) cTGGTTAATACTCTCTGGTGTGACGCATTTGCAGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCTTTACGGTTTTTTATGACCACCGCCAGACAACGGGctta > 1:1591330/1‑149 (MQ=255) tGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCGTTACGGTTTTTTATGACCACCGCCAGAGAACGGGcttct < 1:405648/150‑1 (MQ=255) gTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCGTTACGGTTTTTTATGACCACCGCCAGAGAACGGGCttcttc > 2:1037716/1‑150 (MQ=255) aaTACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCGTTACGGTTTTTTATGACCACCGCCAGAGAACGGGCTTCTTCATc > 2:75493/1‑150 (MQ=255) aTACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCCGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCCGCCGGGAGGCCGGACGTACATGCAGGCCGATACGGTTTTTTAAGACCACCGCCAGAGAACGGGCTTCTTCATCg > 1:875278/1‑150 (MQ=255) aTACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCATGCCGTTACGGTTTTTTATGACCACCGCCAGAGAACGGGCTTCTTCATCg < 1:1470193/150‑1 (MQ=255) aTACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCGTTACGGTTTTTTATGACCACCGCCAGAGAACGGGCTTCTTCATCg < 1:1026255/150‑1 (MQ=255) aTACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCGTTACGGTTTTTTATGACCACCGCCAGAGAACGGGCTTCTTCATCg < 1:545543/150‑1 (MQ=255) aTACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCGTTACGGTTTTTTATGACCACCGCCAGAGAACGGGCTTCTTCATCg < 1:538650/150‑1 (MQ=255) ctctctGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCGTTACGGTTTTTTATGACCACCGCCAGAGAACGGGCTTCTTCATCGTAc < 2:6676/150‑1 (MQ=255) ctctGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCATCCGGGAGTCCGGACGTACATGCAGGCCGTTACGGTTTTTTATGACCACCGCCAGAGAACGGGCTTCTACATCGTACGc > 1:658533/1‑150 (MQ=255) ggTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCGTTACGGTTTTTTATGACCACCGCCAGAGAACGGGCTTCTTCATCGTACGCAGGa < 1:1332222/150‑1 (MQ=255) ggTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCGTTACGGTTTTTTATGACCACCGCCAGAGAACGGGCTTCTTCATCGTACGCAGGa > 2:243480/1‑150 (MQ=255) ggTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAAAGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCGTTACGGATTTTTATGACCACCGCCAGAGAACGGGCTTCTTCATCGTACGCAGGa > 2:966585/1‑150 (MQ=255) gggtgACCCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCGTTACGGTTTTTTATGACCACCGCCAGAGAACGGGCTTCTTCATCGTACGCAGGAc < 1:286689/148‑1 (MQ=255) tgtgACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCGTTACGGTTTTTTATGACCACCGCCAGAGAACGGGCTTCTTCATCGTACGCAGGACa < 2:22846/150‑1 (MQ=255) tgACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCGTTACGGTTTTTTATGACCACCGCCAGAGAACGGGCTTCTTCATCGTACGCAGGACAtg > 1:1650243/1‑150 (MQ=255) tgACGCATTTGCCGTTTTTTTCCAGCAACATATCGACATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCGTTACGGTTTTTTATGACCACCGCCAGAGAACGGGCTTCTTCATCGTACGCAGGACAtg < 1:821471/150‑1 (MQ=255) aCGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCGTTACGGTTTTTTATGACCACCGCCAGAGAACGGGCTTCTTCATCGTACGCAGGACAtgtg < 1:1037716/150‑1 (MQ=255) ttGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCGTTACGGTTTTTTATGACCACCGCCAGAGAACGGGCTTCTTCATCGTACGCAGGACATGTGTCagag > 1:576736/1‑150 (MQ=255) gCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCGTTACGGTTTTTTATGACCACCGCCAGAGAACGGGCTTCTTCATCGTACGCAGGACATGTGTCAGAGAt > 1:1290413/1‑150 (MQ=255) gTTTTTTTCCAGCAACATGTCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCGTTACGGTTTTTTATGACCACCGCCAGAGAACGGGCTTCTTCATCGTACGCAGGACATGTGTCAGAGATTTc < 1:593274/150‑1 (MQ=255) ttttttCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCGTTACGGTTTTTTATGACCACCGCCAGAGAACGGGCTTCTTCATCGTACGCAGGACATGTGTCAGAGATTTCAg < 1:939546/150‑1 (MQ=255) ttttttCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGCCCGGACGTACATGCAGGCCGTTACGGTTTTTTATGACCACCGCCAGAGAACGGGCTTCTTCATCGTACGCAGGACATGTGTCAGAGATTTCAg < 2:253926/150‑1 (MQ=255) tttttCCAGCAACTTATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCGTTACGGTTTTTTATGACCACCGCCAGAGAACGGGCTTCTTCATCGTACGCAGGACATGTGTCAGAGATTTCAgt < 1:1368447/150‑1 (MQ=255) tttttCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCGTTACGGTTTTTTATGACCACCGCCAGAGAACGGGCTTCTTCATCGTACGCAGGACATGTGTCAGAGATTTCAgt < 1:1375175/150‑1 (MQ=255) ccAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCATGCCGTTACGGTTTTTTATGACCACCGCCAGAGAACGGGCTTCTTCATCGTACGCAGGACATGTGTCAGAGATTTCAGTGTCgg < 1:1126718/150‑1 (MQ=255) ccAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCGTTACGGTTTTTTATGACCACCGCCAGAGAACGGGCTTCTTCATCGTACGCAGGACATGTGTCAGAGATTTCAGTGTCgg > 1:785348/1‑150 (MQ=255) cAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCGTTACGGTTTTTTATGACCACCGCCAGAGAACGGGCTTCTTCATCGTACGCAGGACATGTGTCAGAGATTTCAGTGTCgga > 2:121285/1‑150 (MQ=255) ccttatCGACATTTAATGCCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCGTTACGGTTTTTTATGACCACCGCCAGAGAACGGGCTTCTTCATCGTACGCAGGACATGTGTCAGAGATTTCAGTGTCGGAGGACg > 1:189394/4‑150 (MQ=255) atatCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCGTTACGGTTTTTTATGACCACCGCCAGAGAACGGGCTTCTTCATCGTACGCAGGACATGTGTCAGAGATTACAGTGTCGGAGGACGGt > 2:777830/1‑150 (MQ=255) tatCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCGTTACGGTTTTTTATGACCACCGCCAGAGAACGGGCTTCTTCATCGTACGCAGGACATGTGTCAGAGATTTCAGTGTCGGAGGACGGTa < 2:1173367/150‑1 (MQ=255) cGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCGTCACGGTTTGTTATGACCACCGCCAGAGAACGGGCTTCTTCATCGTCCGCAGGACATGTGGCAGAGCTGTCAGTGTCGGAGGACGGTaacc > 1:12887/1‑148 (MQ=255) ggCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCGTTACGGTTTTTTATGACCACCGCCAGAGAACGGGCTTCTTCATCTTACGCCGGACATGTGTCAGAGATTTCAGTGTCGGAGGACGGTAAAcc > 1:152840/1‑150 (MQ=255) ggCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCGTTACGGTTTTTTATGACCACCGCCAGAGAACGGGCTTCTTCATCGTACGCAGGACATGTGTCAGAGATTTCAGTGTCGGAGGACGGTAAAcc > 1:526909/1‑150 (MQ=255) ggCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCGTTACGGTTTTTTATGACCACCGCCAGAGAACGGGCTTCTTCATCGTACGCAGGACATGTGTCAGAGATTTCAGTGTCGGAGGACGGTAAAcc < 1:75493/150‑1 (MQ=255) gCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCGTTACGGTTTTTTATGACCACCGCCAGAGACCGTGCTTCTTCAACGTACGCAGGTCATGTGTCAGAGATTTCAGTGTCGGAGGACGGTAAAccc > 2:1093201/1‑150 (MQ=255) | CAGCTGACGGAAAGCGATCAGTGCCTCTTCAGCTTCTGGCCCTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATGCAGGCCGTTACGGTTTTTTATGACCACCGCCAGAGAACGGGCTTCTTCATCGTACGCAGGACATGTGTCAGAGATTTCAGTGTCGGAGGACGGTAAACCC > NC_000913/1248413‑1248710 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |