| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,650,147 | G→A | 9.7% | pseudogene (70/765 nt) | ydfE → | Qin prophage; pseudogene;Phage or Prophage Related |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,650,147 | 0 | G | A | 9.7% | 268.6 / 13.6 | 93 | pseudogene (70/765 nt) | ydfE | Qin prophage; pseudogene;Phage or Prophage Related |
| Reads supporting (aligned to +/- strand): ref base G (44/40); new base A (4/5); total (48/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.35e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.30e-01 | |||||||||||
AAATATCCGGTTTCATTCTTATATGCCAGCAATGGCAGGGATTTGTTCATCCTTAAATCTGTCATGAGGTTAAAACAAATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCTGGAACATTATCCGGCTGCTCAGGACTGCGCTTATAAATTTATTGTCTGCGAGGATAAACCTGGCATACCCCGCCCTGCCCTCGAT > NC_000913/1650000‑1650296 | aaataTCCGGTTTCATTCTTATATGCCAGCAATGGCAGGGATTTGTTCATCATTAAATCTGTCATGAGGTTAAAACAAATGAGTAAAGTCTTTATTTGCGCCGCTATTGCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTa > 2:149796/1‑150 (MQ=255) aataTCCGGTTTCATTCTTATATGCCAGCAATGGCAGGGATTTGTTCATCCTTAAATCTGTCATGAGGTTAAAACAAATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAg > 1:1499043/1‑150 (MQ=255) atatCCGGTTTCATTCTTATATGCCAGCAATGGCAGGGATTTGTTCATCCTTAAATCTGTCATGAGGTTAAAACAAATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGc < 1:1453764/150‑1 (MQ=255) atatCCGGTTTCATTCTTATATGCCAGCAATGGCAGGGATTTGTTCATCCTTAAATCTGTCATGAGGTTAAAACAAATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGc < 1:122024/150‑1 (MQ=255) tatCCGGTTTCATTCTTATATGCCAGCAATGGCAGGGATTTGTTCATCCTTAAATCTGTCATGAGGTTAAAACAAATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGcc < 1:418888/150‑1 (MQ=255) tatCCGGTTTCATTCTTATATGCCAGCAATGGCAGGGATTTGTTCATCCTTAAATCTGTCATGAGGTTAAAACAAATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGcc < 2:1511876/150‑1 (MQ=255) atCCGGTTTCATTCTTATATGCCAGCAATGGCAGGGATTTGTTCATCCTTAAATCTGTCATGAGGTTAAAACAAATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCca > 2:899878/1‑150 (MQ=255) ccGGTTTCATTCTTATATGCCAGCAATGGCAGGGATTTGTTCATCCTTAAATCTGTCATGAGGTTAAAACAAATGAGTTAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCcaca < 2:1062073/150‑1 (MQ=255) ccGGTTTCATTCTTATATGCCAGCAATGGCAGGGATTTGTTCATCCTTAAATCTGTCATGAGGTTAAAACAAATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCcaca > 2:1558448/1‑150 (MQ=255) cGGTTTCATTCTTATATGCCAGCAATGGCAGGGATTTGTTCATCCTTAAATCTGTCATGAGGTTAAAACAAATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAg > 2:1065596/1‑150 (MQ=255) ggTTTCATTCTTATATGCCAGCAATGGCAGGGATTTGTTCATCCTTAAATCTGTCATGAGGTTAAAACAAATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGc < 2:304226/150‑1 (MQ=255) ggTTTCATTCTTATATGCCAGCAATGGCAGGGATTTGTTCATCCTTAAATCTGTCATGAGCTTAAAACAAATGAGTAAAGGCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGc < 2:829982/150‑1 (MQ=255) gTTTCATTCTTATATGCCAGCAATGTCAGGGATTTGTTCATCCTTAAATCTGTCATGAGGTAAAAACAAATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTACAGCCACAGcg < 1:672116/150‑2 (MQ=255) gTTTCATTCTTATATGCCAGCAATGGCAGGGATTTGTTCATCCTTAAATCTGTCATGAGGTTAAAACAAATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTACAGCCACAGcg < 1:395252/150‑2 (MQ=255) gTTTCATTCTTATATGCCAGCAATGGCAGGGATTTGTTCATCCTTAAATCTGTCATGAGGTTAAAACAAATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTACAGCCACAGcg < 1:435391/150‑2 (MQ=255) gTTTCATTCTTATAAGCCAGCAATGGCAGGGATTTGTTCATCCTTAAATCTGTCATGAGGTTAAAACAAATGAGTAAAGCCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTACAGCCACAGcg < 1:1100593/150‑2 (MQ=255) tttCATTCTTATATGCCAGCAATGGCAGGGATTTGTTCATCCTTAAATCTGTCATGAGGTTAAAACAAATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGAAGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTACAGCCACAGcgc < 2:413770/150‑3 (MQ=255) tCATTCTTATATGCCAGCAATGGCAGGGATTTGTTCATCCTTAAATCTGTCATGAGGTTAAAACAAATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCAtt > 2:429718/1‑150 (MQ=255) cATTCTTATATGCCAGCAATGGCAGGGATTTGTTCATCCTTAAATCTGTCATGAGGTTAAAACAAATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTg < 2:1259680/150‑1 (MQ=255) cTTATATGCCAGCAATGGCAGGGATTTGTTCATCCTTAAATCTGTCATGAGGTTAAAACAAATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGc > 1:1126778/1‑150 (MQ=255) atatGCAAGCAATGGCAGGGATTTGTTCATCCTTAAATCTGTCATGAGGTTAAAACAAATGAGTAAAGTCTTTATTTCCGCCGCTATTCCTGACGAACTGGCTACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTgg < 1:933913/150‑1 (MQ=255) tatGCCAGCAATGGCAGGGATTTGTTCATCCTTAAATCTGTCATGAGGTTAAAACAAATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGc > 2:1374145/1‑150 (MQ=255) tatGCCAGCAATGGCAGGGATTTGTTCATCCTTAAATCTGTCATGAGGTTAAAACAAATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGc > 1:1005932/1‑150 (MQ=255) atGCCAGCAATGGCAGGGATTTGTTCATCCTTAAATCTGTCATGAGGTTAAAACAAATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGcg > 2:604380/1‑150 (MQ=255) tGCCAGCAATGGCAGGTATTTGTTCATCCTTAAATCTGTCATGAGGTTAAAACAAATGAGTAAAGTCTTTATTTGAGCCGCTATTCATGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGACACAGCCATTGAAGCTGGcga > 2:1451669/1‑150 (MQ=255) cAGGGATTTGTTCATCCTTAAATCTGTCATGAGGTTAAAACAAATGAGTAAAGTCTTTATTTGCTCCGCTATTACTGACGAACTGGCAACAATGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGTCGAACGCCGttc > 2:889269/1‑148 (MQ=255) aGGGATTTGTTCATCCTTAAATCTGTCATGAGGTTAAAACAAATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCt > 2:853309/1‑150 (MQ=255) ggACTTGTTCATCCTTAAATCTGTCATGAGGTTAAAACAAATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCg < 2:635501/150‑1 (MQ=255) aTTTGTTCATCCTTAAATCTGTCATGAGGTTAAAACAAATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACATCCATTGAAGCTGGCGACGAACGCCGTGCTCGAg > 2:569638/1‑150 (MQ=255) tGTTCATCCTTAAATCTGTCATGAGGTTAAAACAAATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCaa > 2:865655/1‑150 (MQ=255) gTTCATCCTTAAATCTGACATGAGGTTAAAACAAATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTTTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCaaa > 1:1020531/1‑150 (MQ=255) tCCTTAAATCTGTCATGAGGTTAAAACAAATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGTCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTc < 1:709531/150‑1 (MQ=255) tCCTTAAATCTGTCATGAGGTTAAAACAAATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTc < 1:483404/150‑1 (MQ=255) ccTTAAATCTGTCATGAGGTTAAAACAAATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAATGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCa < 2:720913/150‑1 (MQ=255) tAAATCTGTCATGAGGTTAAAACAAATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGACGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTg < 1:1525527/150‑1 (MQ=255) tAAATCTGTCATGAGGTTAAAACAAATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTg > 2:1421010/1‑150 (MQ=255) tAAATCTGTCATGAGGTTAAAACAAATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTg < 1:1239288/150‑1 (MQ=255) aaaTCTGTCATGAGGTTAAAACAAATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTgg < 2:790205/150‑1 (MQ=255) aaTCTGTCATGAGGTTAAAACAAATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGc > 1:1516830/1‑150 (MQ=255) cTGTCATGAGGTTAAAACAAATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAAt > 1:523131/1‑150 (MQ=255) cATGAGGTTAAAACAAATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGCGCAACATTTCACTGGCAATTccg > 2:937548/1‑149 (MQ=255) cATGAGGTTAAAACAAATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCt > 1:150225/1‑150 (MQ=255) cATGAGGTTAAAACAAATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCt > 1:1026561/1‑150 (MQ=255) aTGAGGTTAAAACAAATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCTg < 2:1197073/150‑1 (MQ=255) tGAGGTTAAAACAAATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCTgg < 2:749897/150‑1 (MQ=255) ggTTAAAACAAATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGAAATTCCTGGaaa > 2:813724/1‑149 (MQ=255) ttAAAACAAATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGCGCTGTGGCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCTg < 2:1322594/150‑1 (MQ=255) tAAAACAAATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCTGGAACAtt > 2:1404442/1‑150 (MQ=255) aaaaCAAATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAAATTCACTGGCAATTCCTGGACCATTa > 2:1264076/1‑150 (MQ=255) aaaCAAATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCTGGCACATTAt > 1:293209/1‑150 (MQ=255) aCAAATGAGTAAAGGCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCTGGAACATTATcc < 1:228585/150‑1 (MQ=255) aaaTGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGAAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCTGGAACATTATCCgg > 2:607744/1‑150 (MQ=255) aaTGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCTGGAACATTATCCGgc < 1:1374145/150‑1 (MQ=255) aaTGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCTGGAACATTATCCGgc < 1:595386/150‑1 (MQ=255) gTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGCACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCTGCAACATTATCCGGCTGCTc > 2:1520862/1‑150 (MQ=255) gTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCTTGAACATTATCCGGCTGCTc < 1:899878/150‑1 (MQ=255) gTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCTGGAACATTATCCGGCTGCTc < 1:976019/150‑1 (MQ=255) gTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCTGGAACATTATCCGGCTGCTc > 2:1527553/1‑150 (MQ=255) gTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCTGGAACATTATCCGGCTGCTc > 2:1345531/1‑150 (MQ=255) aaGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGTCAATTCCTGGAACATTATCCGGCTGCTCAgg < 2:72779/150‑1 (MQ=255) gTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCTGGAACATTATCCGGCTGCTCAGGAc > 1:1149298/1‑150 (MQ=255) gTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCTGGAACATTATCCGGCTGCTCAGGAc > 1:1092841/1‑150 (MQ=255) cTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACCGCCATTGACGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCTGGAACATTATACGGCTGCTCAGGACTg > 2:833387/1‑150 (MQ=255) cTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCTGGAACATTATCCGGCTGCTCAGGACTg < 1:70271/150‑1 (MQ=255) cTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCTGGAACATTATCCGGCTGCTCAGGACTg > 2:360973/1‑150 (MQ=255) cTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCTGGAACATTATCCGGCTGCTCAGGACTg < 1:176233/150‑1 (MQ=255) tATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGTC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCAATTGAAGCTGGCCACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCTGGAACATTATCCGGCTGCTCAGGACTgcgc > 1:926155/1‑150 (MQ=255) ttGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCTGGAACATTATCCGGCTGCTCAGGACTGCGCTta < 1:63059/150‑1 (MQ=255) gcgcCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCTGGAACATTATCCGGCTGCTCAGGACTGCGCTtata < 2:1458195/150‑1 (MQ=255) gccgcTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCTGGAACATTATCCGGCTGCTCAGGACTGCGCTTATaaa < 1:1544671/150‑1 (MQ=255) cTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGACGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCTGGAACATTATCAGGCTGCTCAGGAGTGCGCTTATAAATTTa > 2:1277172/1‑150 (MQ=255) aTTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCTGGAACATTATCCGGCTGCTCAGGACTGCGCTTATAAATTTAtt < 1:604380/150‑1 (MQ=255) ttCCTGACGAACTGGCAACAACGGAAGAAGGC‑‑‑‑‑‑TCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCTGGAACATTATCCGGCTGCTCAGGACTGCGCTTATAAATTTATTg < 2:98147/150‑1 (MQ=255) ccTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCTGGAACATTATCCGGCTGCTCAGGACTGCGCTTATAAATTTATTGTc < 1:853309/150‑1 (MQ=255) gACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCTGGAACATTATCCGGCTGCTCAGGACTGCGCTTATAAATTTATTGTCTGc < 1:390029/150‑1 (MQ=255) gACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCTGGAACATTATCCGGCTGCTCAGGACTGCGCTTATAAATTTATTGTCTGc < 1:1591161/150‑1 (MQ=255) aCTGGCAACAAGTGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCTGGAACATTATCCGGCTGCTCAGGACTGCGCTTATAAATTTATTGTCTGCGAGGa > 2:731606/1‑150 (MQ=255) cTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCATGGAACATAATCCGGCTGCTCAGGACTGCGCTAATAAATTTATTGTCTGCGAGGAt > 2:1710091/1‑150 (MQ=255) tGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑TCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCTGGAACATTATCCGGCTGCTCAGGACTGCGCTTATAAATTTATTGTCTGCGAGGATa < 1:248316/150‑1 (MQ=255) ggCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCTGGAACATTATCCGGCTGCTCAGGACTGCGCTTATAAATTTATTGTCTGCGAGGATaa < 2:429523/150‑1 (MQ=255) ggCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCTGGAACATTATCCGGCTGCTCAGGACTGCGCTTATAAATTTATTGTCTGCGAGGATaa > 1:556808/1‑150 (MQ=255) aaGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCTGGAACATTATCCGGCTGCTCAGGACTGCGCTTATAAATTTATTGTCTGCGAGGATAAACCTgg > 1:931402/1‑150 (MQ=255) aaGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCTGGAACATTATCCGGCTGCTCAGGACTGCGCTTATAAATTTATTGTCTGCGAGGATAAACCTgg < 1:195440/150‑1 (MQ=255) gggAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCCCTGGCAATTCCTGGAACATTATCCGGCTGCTCAGGACTGCGCTTATAAATTTATTGTCTGCGAGGATAAACCTGGCa > 2:987113/1‑150 (MQ=255) gggAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCTGGAACATTATCCGGCTGCTCAGGACTGCGCTTATAAATTTATTGTCTGCGAGGATAAACCTGGCa < 2:1005932/150‑1 (MQ=255) agaagGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAATTTTCACTGGCAATTCCTGGAACAATATCAGGCTGCTCAGGACTGAGCTTATAAATTTATTGTCTGCGAGGATAAACCTGGCATAcc > 2:869467/1‑150 (MQ=255) agGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCTGGAACATTATCCGGCTGCTCAGGACTGCGCTTATAAATTTATTGTCTGCGAGGATAAACCTGGCATACCCCg > 2:1107833/1‑150 (MQ=255) aatggcTGTGGCTACAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCATTGGCAATTCCTGGAACATTATCCGGCTGCTCAGGACTGCGCTTATAAATTTATTGTCTGCGAGGATAAACCTGGCATACCCCg > 1:1539257/5‑150 (MQ=255) aatggcTGTGGCTACAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCTGGAACATTATCCGGCTGCTCAGGACTGCGCTTATAAATTTATTGTCTGCGAGGATAAACCTGGCATACCCCg > 1:1095358/5‑150 (MQ=255) aatggcTGTGGCTACAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCTGGAACATTAACCGGCTGCTCAGGACTGCGCTTATAAATTTATTGTCTGCGAGGATAAACCTGGCATACCCCg > 1:974722/5‑150 (MQ=255) atggcTGTGGCTACAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCTGGAACATTATCCGGCTGCTCAGGACTGCGCTTATAAATTTATTGTCTGCGAGGATAAACCTGGCATACCCCgc > 1:1519463/4‑150 (MQ=255) tgGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCTGGAACATTATCCGGCTGCTCAGGACTGCGCTTATAAATTTATTGTCTGCGAGGATAAACCTGGCATACCCCgccctgccc < 2:1020531/150‑1 (MQ=255) ggCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAATAGTTCACTGGCAATTCCTGGAACATTATCCGGCTGCTCAGGACTTCGCGTATAAATTTATTGTCTGCGAGGATAAACCTGGCATACCCCgccctgcccg > 1:1388614/1‑149 (MQ=255) gTAGACACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCTGGAACATTATCCGGCTGCTCAGGACTGCGCTTATAAATTTATTGTCTGCGAGGATAAACCTGGCATACCCCGCCCTGCCCTCGAt < 1:865655/150‑1 (MQ=255) | AAATATCCGGTTTCATTCTTATATGCCAGCAATGGCAGGGATTTGTTCATCCTTAAATCTGTCATGAGGTTAAAACAAATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGC‑‑‑‑‑‑GCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCTGGAACATTATCCGGCTGCTCAGGACTGCGCTTATAAATTTATTGTCTGCGAGGATAAACCTGGCATACCCCGCCCTGCCCTCGAT > NC_000913/1650000‑1650296 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |