| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,074,691 | C→G | 7.8% | intergenic (+33/‑88) | flu → / → yeeR | CP4‑44 prophage; antigen 43 (Ag43) phase‑variable biofilm formation autotransporter/CP4‑44 prophage; putative membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,074,691 | 0 | C | G | 7.8% | 267.5 / 12.9 | 102 | intergenic (+33/‑88) | flu/yeeR | CP4‑44 prophage; antigen 43 (Ag43) phase‑variable biofilm formation autotransporter/CP4‑44 prophage; putative membrane protein |
| Reads supporting (aligned to +/- strand): ref base C (48/44); new base G (3/5); total (53/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.83e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.56e-01 | |||||||||||
Only 100 of 107 total aligned reads displayed.
GAAGCCCGTGTCCGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAGGATTTGCCATTCTTCGCCTTT > NC_000913/2074542‑2074839 | gAAGCCCGTGTCCGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGtcatc > 2:238648/1‑150 (MQ=255) cccGTGTCCGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGa > 1:829369/1‑150 (MQ=255) tgtCCGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCgg < 2:156042/150‑1 (MQ=255) gtCCGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCggg > 2:414005/1‑150 (MQ=255) ccGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATGATGACCGGGAc < 1:400646/150‑1 (MQ=255) ccGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATGATGACCGGGAc < 1:415840/150‑1 (MQ=255) ccGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATGATGACCGGGAc < 1:1288777/150‑1 (MQ=255) ccGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGAATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATGATGACCGGGAc < 1:1295592/150‑1 (MQ=255) cGGGAAGATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCCGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGCCAGAACCATCGCCTCTCTGTGGTCCCGGGCATGAAGGCCGGGccc > 1:1440356/1‑150 (MQ=255) cGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGAcc > 1:313463/1‑150 (MQ=255) cGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATAACCGGGAcc > 2:1060813/1‑150 (MQ=255) ggAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGGCCACCTGACCGGGGCCCg > 1:425622/1‑150 (MQ=255) aaTATCACCCGGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGACCCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGAcc < 1:1176808/150‑1 (MQ=255) atCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCCCACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGgc > 2:121141/1‑150 (MQ=255) atCACACTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGgc > 1:1031119/1‑150 (MQ=255) tCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGCACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGgcg > 1:1114907/1‑150 (MQ=255) cccTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCaa > 2:643139/1‑150 (MQ=255) cTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGATCATCATGACCGGGACCCGGACCGGCGCAACg < 2:1613106/150‑1 (MQ=255) gCGTTCAGGCCGTTTATGCCCACTGCGTCAGCTGCAGCTGCGCTGATGGTTATAAGGGTCTGGCAACACTTAATGTGACCTTCTCACAGAACCATCGCCTCTCTGTGGGCCCGGTCATCATCACGGGGACCCGGACCGGCGCAACGGATc < 2:1474957/150‑1 (MQ=255) gtttatggCCGTTTATGCCACGCGCGCCTGGGGCTGCAGCGGTTATGGTTAAAATGGTCTGCCCACATTTAATGTGACCTTGTTCCACAACCAGCGCCTATCTGGGGGCCCGTGAAACATGACGGGGACCCGGACCGGCGCAACGGATCt < 2:1281478/144‑1 (MQ=255) tCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCa < 2:1200830/150‑1 (MQ=255) cAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCaa > 1:897799/1‑150 (MQ=255) ggcggtttATGCCCACAGCGTCAGCGGCTGCAGCGCGGAAGGTTTTACGGGTCTGGCCACACGTTTTGTGACGTTCTGACTGAACCTTCGCCACTCTGTGGTCCGGGTCATCATGACCGGTACCCGGACCGGCGCAACGGATCTTCAACg < 2:829369/144‑1 (MQ=255) gCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGCCCCGGACCGGCGCAACGGATCTTCAACGc > 2:618960/1‑150 (MQ=255) ggTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCcag < 1:887913/150‑2 (MQ=255) tATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACAtt > 2:811066/1‑150 (MQ=255) cccACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATAATGAACGGGACCCGGCCCGGCGCAACCGCTCTTAAAACCCACATTCGcg > 1:1714874/1‑149 (MQ=255) cacaGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCtt < 1:494015/132‑1 (MQ=255) cacaGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCtt > 2:494015/1‑132 (MQ=255) ccaGCGTCAGCGGCAGCAGCGCTGAAGTGAATAACGGTCAGGCCACACTGAATGTGACCTTCTCCCAGAACCAGCGCCTCTGTGTGGGCCCGGTCATCATGCCCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGc < 1:1397537/149‑1 (MQ=255) acaGCGTCCGGGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTCAATGTCACCTTCTGACACAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACGGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGc < 1:1399321/150‑1 (MQ=255) aGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACCTTCGCGGGCAt > 1:1605806/1‑150 (MQ=255) gTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTaa > 1:987454/1‑150 (MQ=255) ttggggCTGCAGGGATGAAGGGTATAACGGTCAGGACAAACTGATTGTGACCTTATGACAGTACCATGGCCTCTCTGTGGTCCGGGTCATCATGAGCGGGACGCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACa < 2:1697171/146‑1 (MQ=255) cAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACa < 1:26312/150‑1 (MQ=255) cAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACa < 2:895407/150‑1 (MQ=255) aGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCCTCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATGAACaa > 1:276282/1‑150 (MQ=255) cGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATa > 1:954823/1‑150 (MQ=255) ggCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGACCCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCCCATTCGCTGGCATTAACAATaa > 1:1028062/1‑150 (MQ=255) ggCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCGCCGGCTCTTAAACGCCACATTCGCGGGCATTATCAATaa > 1:1579221/1‑150 (MQ=255) ggCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCACCGGATCTTCAACGCCACATTCGCTGGCATTAACAATaa > 1:44703/1‑150 (MQ=255) cagcagCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGCCCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACa > 2:60538/1‑150 (MQ=255) cagcagCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTAATCAAGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCCCATTCGCTGGCATTAACAATAACa > 2:671228/1‑150 (MQ=255) agcagcGCTGATGGTTATAACGGTCAGGCCACAGTGATTGTGACCTTCATACAGAACCATCGCCTCTGTGTGGTCCCGTGCATCATGACCGGTACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACAt < 1:1640506/150‑1 (MQ=255) agcagcGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCGACATTCGCTGGCATTAACAATAACAt > 2:1232810/1‑150 (MQ=255) gccgggcTTAAGGGTATAAGGGTCAGGCCACAGTTACTGTTACCTGCGGACCGAACCATCGCCTCTCTGGGGTCCGGGGCTTCTTGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATg < 2:1569990/145‑1 (MQ=255) cagcGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGACCCATCGCCTCTCTGTGGTCCCGGTGATCATGACCGGGCCCCGGGCCGGCGGAACGGGTCTTCAACGCCACCTTCGCTGGCATTTACAATAACATGa > 2:1527934/1‑150 (MQ=255) cagcGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGa < 2:931825/150‑1 (MQ=255) agcGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCGTCAACGCCACCTTCGCGGGCATTTACAATAACATGat > 1:681947/1‑150 (MQ=255) agcGCTGAAGGGTAAAACGGTCAGGCCACACTGAATTTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGat < 2:934152/150‑1 (MQ=255) tgatgtttataAGGGTCAGGCAACAAGGAATGTCAGATTCTGACAGAACCATCGCATGTATGGGGTCCTGGTAATCATGACGGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATtca < 2:1490801/143‑1 (MQ=255) gTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTATCAATAACATGATATTCATCACgg < 2:1139454/150‑1 (MQ=255) gTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACgg < 2:416331/150‑1 (MQ=255) gTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTAATAATGACCGGGACCCGGCCCGGCGCAACGGGTCTTCAACGCCACATTCGCGGGCATTTACAATAACATGATTTTGATAACgg > 1:1567294/1‑150 (MQ=255) taACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGt > 1:660532/1‑150 (MQ=255) tgtcagaaGGTCACATTCAGTGTGGCCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACAGGATATTCATCACGGAGTg > 1:1049531/8‑150 (MQ=255) cGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCACCGCCACCTTCGCTGGCATTAACAATAACAAGATATTCATCACGGAGTGAc > 2:239639/1‑150 (MQ=255) cGGTCAGGCCACACTCAATGTCACCTTCTGACCGAACCACCGCCTCTCTGGGGCCCCGGCCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGAc < 2:409529/150‑1 (MQ=255) gTCTGGCCACACTGAATGTTACCTTCTGACACAACCATCGCCTCTCTGTGGTCCCGTGCCTCATGCCCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATAATCATCACGGAGTGACTa < 1:1620476/150‑1 (MQ=255) gTCAGGCCACACTTAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTa < 2:1192388/150‑1 (MQ=255) ggCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTTATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGtt > 1:18979/1‑150 (MQ=255) gCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTTGCATTAACAATAACATGATATTCATCCCGGAGTGACTATGTTa > 2:1086066/1‑150 (MQ=255) gCCACACTGAAGGTGACCTTCTGACACAACCATCCCCTCTCTGTGGCCCCGTTAATCATGCCCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTa < 1:555568/150‑1 (MQ=255) ccACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATATTAc < 2:308181/150‑1 (MQ=255) cacaCTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGCCCCGGACCGGCGGAGGGGTTCTTAAACGCCACAGTCGCTGGCATGTACAAGGACATGATATTCATCACGGAGTGCATATGTTaga > 2:252667/1‑148 (MQ=255) cacaCTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGCCCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACa > 1:1011880/1‑150 (MQ=255) cacaCTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACAGGGACCCGGCCCGGCGCAACGGATCTTCAACGACGCATTGGCTGGCATTTACAATATCAGGAGATTCTTCAGGGAGTGACTATGTTACa > 2:1113580/1‑150 (MQ=255) acacTGAATGTGAACTACTGACAGAACCATCGCCTCTCTGTGATCCCGGACATCAAGACCGGGACCCGGACCGGCGCAACCGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAg > 1:1122952/1‑150 (MQ=255) acTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACAGTCGCTGGCATTAACAATAACAAGATATTAATCACCGCGTGACGATTTTACAGAt > 2:871948/1‑150 (MQ=255) aTGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCg > 2:1018686/1‑150 (MQ=255) gtgACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGgc < 1:1703064/150‑1 (MQ=255) gACCTTCTGACAGAACCATCGCCTCTCTGTGGGCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGgcgc < 1:229452/150‑1 (MQ=255) aCCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGgcgcg < 1:640384/150‑1 (MQ=255) cTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAAGGGATCTGCAACGCCACATGCGCTGGCAGTAACAATATCATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCt < 1:268168/150‑1 (MQ=255) cTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACAATGTTACAGATAGTCGGCGCGCTGAt > 2:900878/1‑150 (MQ=255) tGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCGACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATc > 1:1173759/1‑150 (MQ=255) gACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATcc < 2:57260/150‑1 (MQ=255) cAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCAGTAACAATAACATGATATTCATCACGGAGTGACTTTGTTACAGATAGTCGGCGCGCTGATCctg > 2:76706/1‑150 (MQ=255) cAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCCGACCGGCGCAACGGATATTCAACCCCACATTCGCTGGCATTAACAATAACATGATATTAATCACGGAGTGACTATGTTACAGATATTCGGCGCGCTGATCctg > 1:377757/1‑150 (MQ=255) cAGAACCATCGCCTCTCTGTGGTCCCCGTCATCATTACCGGGACCCGGAACGGCGCAACGGATCTTCAACGCCACCTTAGCTTGCATTTACCATAAAATGATATTAATCACGGAGTGACTTTGGTACAGATAGTAGGCGCGCTTTTCctg > 2:871313/1‑150 (MQ=255) cAGAACCATCGCCTCTCTGTGGTCCCCGTCATCATGACCGGGACCCGGCCCGGCGCAACGGATCTTCAACGCCCCATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTTCAGATTGTCGGCGCGCTGATCctg > 2:578962/1‑150 (MQ=255) aaCCATCGCCTCTCTGTGGTCCCGGTCATCATGCCCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCctgctg < 1:414005/150‑1 (MQ=255) aCCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGa > 1:103314/1‑150 (MQ=255) cATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATc < 1:1064608/150‑1 (MQ=255) gCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAg < 1:1720161/150‑1 (MQ=255) gCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAg < 1:121141/150‑1 (MQ=255) ctctctGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAGGa > 2:226337/1‑150 (MQ=255) ctGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACAAGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGAACCTGCTGATCGCAGGATTTg < 2:853536/150‑1 (MQ=255) ctGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAAAAACATGATATTCATCACGGAGTGACTATGTTAAAGATAGTCGGCGCGCTGATCCGGCTGATCGCAGGAtttt > 1:1371043/1‑149 (MQ=255) gtgGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAGGATTTGcc < 2:1031119/150‑1 (MQ=255) gtgGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGACGGCGCGCTGATCCTGCTGATCGCAGGATTTGcc < 2:500980/150‑1 (MQ=255) cgggTCCCGGTCATGATGACCGGGCCCCGGACCGGCGCAACGGATCTTCAACGCCCCATTCGCGGGCATTAACAATAACATGATATTGATCAGGGAGTGCCTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAGGATTTGcc > 1:1730257/3‑150 (MQ=255) gTCCCGGTCATGATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAGGATTTGCCAtt > 2:1682823/1‑150 (MQ=255) gTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAGGATTTGCCAtt > 2:840221/1‑150 (MQ=255) ggTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAGGATTTGCCATTCTTCg < 2:103314/150‑1 (MQ=255) gTCATCATGCCCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAGGATTTGCCATTCTTCGc < 2:1058546/150‑1 (MQ=255) tcatcaTGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCg > 1:1221567/1‑129 (MQ=255) tcatcaTGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCg < 2:1221567/129‑1 (MQ=255) catcatGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAGGATTTGCCATTCTTCGCCt < 2:1398303/150‑1 (MQ=255) tcatGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAGGATTTGCCATTCTTCGCCttt > 2:173012/1‑150 (MQ=255) | GAAGCCCGTGTCCGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAGGATTTGCCATTCTTCGCCTTT > NC_000913/2074542‑2074839 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |