| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,439,589 | 0 | G | C | 23.3% | 357.1 / 119.5 | 163 | intergenic (‑80/+27) | yhdN/rplQ | DUF1992 family protein/50S ribosomal subunit protein L17 |
| Reads supporting (aligned to +/- strand): ref base G (53/72); new base C (15/23); total (68/95) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.52e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.52e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 167 total aligned reads displayed.
GGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCC > NC_000913/3439494‑3439687 | ggTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCg > 2:1517427/1‑100 (MQ=255)ggTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCg > 2:1515508/1‑100 (MQ=255) tCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCggg < 1:2917914/100‑1 (MQ=255) tCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCggg < 1:3020883/100‑1 (MQ=255) tCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCCCGGCggg < 1:3057380/100‑1 (MQ=255) gTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCCCGGCGGGtttt < 1:2106055/100‑1 (MQ=255) gTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCCCGGCGGGtttt < 2:2158612/100‑1 (MQ=255) tAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGttttt > 1:1989884/1‑100 (MQ=255) tAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCCCGGCGGGttttt < 1:1817674/100‑1 (MQ=255) aaCCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGtttttt < 2:1349799/100‑1 (MQ=255) aaCCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCCCGGCGGGtttttt < 2:2406833/100‑1 (MQ=255) aaCCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCCCGGCGGGtttttt < 2:875091/100‑1 (MQ=255) aCCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAAACCCGCCGGGGCGGGtttttt > 1:2438371/1‑100 (MQ=255) aCCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGttttttt > 1:2915819/1‑100 (MQ=255) aCCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCCCGGCGGGttttttt < 2:1844335/100‑1 (MQ=255) aCCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCCCGGCGGGttttttt < 1:248565/100‑1 (MQ=255) aCCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCCCGGCGGGttttttt < 1:248429/100‑1 (MQ=255) aCCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCCCGGCGGGttttttt < 2:3095765/100‑1 (MQ=255) ccACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTa < 1:1729722/100‑1 (MQ=255) ccACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTa < 1:1901132/100‑1 (MQ=255) ccACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCCCGGCGGGTTTTTTTa < 2:1866796/100‑1 (MQ=255) cacaTAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTAc < 2:2024815/100‑1 (MQ=255) cacaTAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTAc < 2:1118995/100‑1 (MQ=255) cacaTAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTAc > 2:1773187/1‑100 (MQ=255) cacaTAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCCCGGCGGGTTTTTTTat < 1:1519441/100‑2 (MQ=255) cacaTAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCCCGGCGGGTTTTTTTat < 2:350119/100‑2 (MQ=255) aTAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCCCGGCGGGTTTTTTTatacc < 1:1095983/100‑5 (MQ=38) aaaTACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGc < 1:230870/100‑1 (MQ=255) aCTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCa < 1:46611/100‑1 (MQ=255) aCTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCa < 1:46536/100‑1 (MQ=255) cTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAg > 2:1870716/1‑100 (MQ=255) cTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAg > 1:1531244/1‑100 (MQ=255) ccgggggAGGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGAt < 1:2085979/97‑1 (MQ=255) ccAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGAt > 2:271887/1‑100 (MQ=255) cAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGAtt < 1:176562/100‑1 (MQ=255) ggATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTActc > 2:2270322/1‑100 (MQ=255) ggAAGAAAAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTActc < 2:1346638/100‑1 (MQ=255) gAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTgca < 1:2178547/100‑1 (MQ=255) aaCAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTgcag > 1:507467/1‑100 (MQ=255) aCAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTgcagc > 2:1866209/1‑100 (MQ=255) aCAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTgcagc < 1:2576095/100‑1 (MQ=255) aaaaaGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGcagcag < 1:1146294/100‑1 (MQ=255) aaaGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCt > 2:1005224/1‑100 (MQ=255) aaaGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTGCAGAGTAATCTgaagcaacg < 1:3085238/100‑4 (MQ=255) agagTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTc < 1:1337572/100‑1 (MQ=255) agagTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTGCAGAGTAATCTgaagcaacgta < 2:1250172/100‑6 (MQ=38) gagTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCt < 1:2084036/100‑1 (MQ=255) gTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGc < 2:922631/100‑1 (MQ=255) gTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGc < 2:55176/100‑1 (MQ=255) cAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCTGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCttt > 2:472202/1‑100 (MQ=255) aGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTtc > 2:29366/1‑100 (MQ=255) aGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTtc < 2:1254441/100‑1 (MQ=255) aGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTtc < 2:1254106/100‑1 (MQ=255) gCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTtct < 2:2000692/100‑1 (MQ=255) cTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTtctc < 2:518226/100‑1 (MQ=255) cTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTtctc < 1:3093567/100‑1 (MQ=255) tATTGGAGATAAGTGGGGATACTACGGGTAT‑AAAAAACCCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTctct < 2:2989000/100‑1 (MQ=255) aTTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTg > 2:429117/1‑100 (MQ=255) aTTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTATCTCTg > 1:1378144/1‑100 (MQ=255) ttGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGa < 1:2757289/100‑1 (MQ=255) gTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAAc > 1:906368/1‑100 (MQ=255) tAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACg > 2:2076407/1‑100 (MQ=255) tAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACg < 2:2112748/100‑1 (MQ=255) tAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACg < 1:3037347/100‑1 (MQ=255) tAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACg < 2:1410530/100‑1 (MQ=255) tAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACg < 1:909891/100‑1 (MQ=255) gATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGAt < 2:416026/100‑1 (MQ=255) tAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCa > 2:2415574/1‑100 (MQ=255) tAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCa < 1:90373/100‑1 (MQ=255) tGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCa > 1:2302602/1‑100 (MQ=255) tGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCa > 1:2783507/1‑100 (MQ=255) ggATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCt > 2:958267/1‑100 (MQ=255) gATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTc > 2:2884936/1‑100 (MQ=255) aTACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCg < 2:651644/100‑1 (MQ=255) actacGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGAt < 1:3102318/100‑1 (MQ=255) cGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTaa > 1:1395075/1‑100 (MQ=255) cGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTaa > 1:1687515/1‑100 (MQ=255) gggTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAg < 1:445539/100‑1 (MQ=255) caacgt‑aAAAAAACCCGCCCCGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAg > 2:2919213/6‑100 (MQ=38) ggTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGc < 1:1180993/100‑1 (MQ=255) ggTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGc > 2:118724/1‑100 (MQ=255) cgt‑aAAAAAACCCGCCCCGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCa > 1:2548867/3‑100 (MQ=38) t‑aAAAAAACCCGCCCCGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATc > 1:2816221/1‑100 (MQ=255) aaaaaaaCCCGCCCCGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCg > 1:736092/1‑100 (MQ=255) aaaaaaaCCCGCCCCGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCg > 1:1577308/1‑100 (MQ=255) aaaaaaCCCGCCCCGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCgg > 1:1208975/1‑100 (MQ=255) aaaaaaCCCGCCCCGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCgg > 1:2726182/1‑100 (MQ=255) aaaaaCCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGgc < 2:1501083/100‑1 (MQ=255) aaaaaCCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGgc > 2:2341686/1‑100 (MQ=255) aaaaaCCCGCCCCGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGgc > 2:1334716/1‑100 (MQ=255) aaaaCCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGgcg < 1:2434972/100‑1 (MQ=255) aaaaCCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGgcg > 1:609858/1‑100 (MQ=255) aaaaCCCGCCCCGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGgcg > 1:1069980/1‑100 (MQ=255) aaaCCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGgcgc < 1:2805092/100‑1 (MQ=255) cccGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGtt > 2:1558429/1‑100 (MQ=255) ccgccgGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTg > 1:2209850/1‑100 (MQ=255) ccgccgGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTg > 1:2209762/1‑100 (MQ=255) cgccgGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGt < 2:3042481/100‑1 (MQ=255) ggggCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGcc < 2:1990511/100‑1 (MQ=255) ggggCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGcc < 2:800926/100‑1 (MQ=255) | GGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAT‑AAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCC > NC_000913/3439494‑3439687 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |