Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,015,9120TA24.5% 290.3 / 103.2 147intergenic (+30/+40)rmf/fabAribosome modulation factor/beta‑hydroxydecanoyl thioester dehydrase
Reads supporting (aligned to +/- strand):  ref base T (52/59);  new base A (21/15);  total (73/74)
Fisher's exact test for biased strand distribution p-value = 2.55e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.18e-01
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 154 total aligned reads displayed.

GCTGAATCAAAGGTCACAATGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAGAAGGCAGACGTATCCTGGAACAGACCGACTTTCAGGTCGCTGGCGGTATAGATCAG  >  NC_000913/1015813‑1016011
                                                                                                   |                                                                                                   
 ctaaaTCAAAGGTCACAATGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCAtt                                                                                                    >  1:1518177/4‑100 (MQ=255)
   gAATCAAAGGTCACAATGGCTGGGAGGCTGGCGAGAAGCCTTGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGc                                                                                                  >  2:1442309/1‑100 (MQ=255)
    aaTCAAAGGTCACAATGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCg                                                                                                 >  1:26394/1‑100 (MQ=255)
     aTCAAAGGTCACAATGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCgg                                                                                                <  2:1373003/100‑1 (MQ=255)
     aTCAAAGGTCACAATGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCgg                                                                                                <  1:3009887/100‑1 (MQ=255)
     aTCAAAGGTCACAATGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCgg                                                                                                >  2:556258/1‑100 (MQ=255)
       cAAAGGTCACAATGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAg                                                                                              <  2:1695206/100‑1 (MQ=255)
          aGGTCACAATGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGtt                                                                                           <  2:2024006/100‑1 (MQ=255)
          aGGTCACAATGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCAATGCGGAGGtt                                                                                           <  1:2003029/100‑1 (MQ=255)
          aGGTCACAATGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCAATGCGGAGGtt                                                                                           <  1:2757148/100‑1 (MQ=255)
          aGGTCACAATGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCAATGCGGAGGtn                                                                                           <  2:2500988/100‑2 (MQ=255)
           ggTCACAATGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGttt                                                                                          >  2:1293659/1‑100 (MQ=255)
            gTCACAATGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCAATGCGGAGGTTTc                                                                                         <  2:255186/100‑1 (MQ=255)
            gTCACAATGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAGGGTAGTAANGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCAATGCGGAGGTTTc                                                                                         <  2:886628/100‑1 (MQ=255)
             tCACAATGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCg                                                                                        >  1:1224373/1‑100 (MQ=255)
             gcacaAGGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCAATGCGGACGTTTct                                                                                        <  2:1609464/99‑2 (MQ=255)
              cacaATGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGc                                                                                       <  1:768955/100‑1 (MQ=255)
              cacaATGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGc                                                                                       <  1:2962286/100‑1 (MQ=255)
              cacaATGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCAATGCGGAGGTTTctt                                                                                       <  2:2668014/100‑3 (MQ=255)
              cacaATGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCAATGCGGAGGTTTctt                                                                                       <  2:2066945/100‑3 (MQ=255)
              cacaATGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCAATGCGGAGGTTTctt                                                                                       <  2:2066512/100‑3 (MQ=255)
                caATGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCt                                                                                     >  1:2680810/1‑100 (MQ=255)
                caATGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCt                                                                                     >  2:440662/1‑100 (MQ=255)
                 aaTGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCAATGCGGAGGTTTcttttt                                                                                    <  1:2565775/100‑6 (MQ=255)
                   tGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGCTTCGCCtttt                                                                                  <  1:2249120/100‑1 (MQ=255)
                    ggCTGGGAGGCTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTg                                                                                 <  2:541224/100‑1 (MQ=255)
                     gCTGGGAGGCTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGa                                                                                >  1:234993/1‑100 (MQ=255)
                     gCTGGGAGGCTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGa                                                                                >  1:1111228/1‑100 (MQ=255)
                      cTGGGAGGCTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGAt                                                                               <  2:127685/100‑1 (MQ=255)
                          gAGGCTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATActc                                                                           >  2:1791062/1‑100 (MQ=255)
                            ggCTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATACtctg                                                                         <  1:1029486/100‑1 (MQ=255)
                            ggCTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATACtctg                                                                         <  2:471226/100‑1 (MQ=255)
                            ggCTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATACtctg                                                                         <  2:39134/100‑1 (MQ=255)
                             gCTGGCAAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATACtctgt                                                                        >  2:1617471/1‑100 (MQ=255)
                              cTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATACtctgtc                                                                       >  1:1056445/1‑100 (MQ=255)
                              cTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATACtctgtc                                                                       >  1:1056678/1‑100 (MQ=255)
                              cTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTACGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATACtctgtc                                                                       <  2:2468834/100‑1 (MQ=255)
                               tGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATACtctgtct                                                                      >  2:2307644/1‑100 (MQ=255)
                                ggCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATACtctgtctg                                                                     <  1:2061481/100‑1 (MQ=255)
                                ggCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATACtctgtctg                                                                     <  2:790050/100‑1 (MQ=255)
                                 gCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATACTCTGTCTGa                                                                    <  1:1718693/100‑1 (MQ=255)
                                   gagaTGCCATGGCGGACAGGGTTGTAGTGGCGTGAGTCTGGCTCTTTGAAAAGAAACCTCCGCATTGCGGAGGTTGCGCCTTTTGATACTCGGTCTGAtt                                                                  <  2:1660878/100‑1 (MQ=255)
                                   gagaAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATACTCTGTCTGAtt                                                                  <  2:3047878/100‑1 (MQ=255)
                                     gaAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATtat                                                                <  2:2811499/100‑1 (MQ=255)
                                     gaAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATtat                                                                >  1:2567071/1‑100 (MQ=255)
                                     gaAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATtat                                                                <  2:2813290/100‑1 (MQ=255)
                                        gCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAAt                                                             >  1:2023301/1‑100 (MQ=255)
                                         ccATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATc                                                            <  1:2510785/100‑1 (MQ=255)
                                         ccATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATc                                                            <  1:149780/100‑1 (MQ=255)
                                          cATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCa                                                           <  2:1034101/100‑1 (MQ=255)
                                           aTGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAg                                                          >  2:1561717/1‑100 (MQ=255)
                                               cGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAGacag                                                      <  2:1472470/100‑4 (MQ=255)
                                               cGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAGacag                                                      <  2:1844072/100‑4 (MQ=255)
                                               cGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAGAAgg                                                      <  1:2631115/100‑1 (MQ=255)
                                               cGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAAGCAGAAgg                                                      <  2:2195569/100‑1 (MQ=255)
                                                  aCAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAGAAGGCAg                                                   <  1:643642/100‑1 (MQ=255)
                                                   cAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAGAAGGCAGa                                                  <  2:237198/100‑1 (MQ=255)
                                                     gggTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAGAAGGCAGACg                                                >  1:574442/1‑100 (MQ=255)
                                                      ggTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAGAAGGCAGACGt                                               >  1:2499940/1‑100 (MQ=255)
                                                             aTGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAGAAGGCAGACGTATCCTgg                                        <  2:661366/100‑1 (MQ=255)
                                                              tGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAGAAGGCAGACGTATCCTGGa                                       <  2:1342256/100‑1 (MQ=255)
                                                               ggCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAGAAGGCAGACGTATCCTGGaa                                      >  1:2073849/1‑100 (MQ=255)
                                                               ggCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAGAAGGCAGACGTATCCTGGaa                                      >  2:1021360/1‑100 (MQ=255)
                                                                 ccTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAGAAGGCAGACGTATCCTGGAACa                                    >  1:1031256/1‑100 (MQ=255)
                                                                  cTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAGAAGGCAGACGTATCCTGGAACAg                                   >  2:3045031/1‑100 (MQ=255)
                                                                     aTTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAGAAGGCAGACGTATCCTGGAACAGAcc                                <  1:1699356/100‑1 (MQ=255)
                                                                       tCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAGAAGGCAGACGTATCCTGGAACAGACCGa                              <  1:533632/100‑1 (MQ=255)
                                                                        cTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAGAAGGCAGACGTATCCTGGAACAGACCGAc                             <  2:2038829/100‑1 (MQ=255)
                                                                          gTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAGAAGGCAGACGTATCCTGGAACAGACCGACtt                           >  2:1099871/1‑100 (MQ=255)
                                                                          gTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAGAAGGCAGACGTATCCTGGAACAGACCGACtt                           <  2:1802420/100‑1 (MQ=255)
                                                                              ctTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAGAAGGCAGACGTATCCTGGAACAGACCGACTTTCAg                       >  1:1477348/1‑100 (MQ=255)
                                                                              ctTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAGAAGGCAGACGTATCCTGGAACAGACCGACTTTCAg                       >  1:1477170/1‑100 (MQ=255)
                                                                              ctTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTGTTGATACTCTGTCTGATTATAATCAGAAGGCAGACGTATCCTGGAACAGACCGACTTTCAg                       <  2:1923202/100‑1 (MQ=255)
                                                                                  aaaaaGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAGAAGGCAGACGTATCCTGGAACAGACCGACTTTCAGGTCg                   <  1:2809038/100‑1 (MQ=255)
                                                                                  aaaaaGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAGAAGGCAGACGTATCCTGGAACAGACCGACTTTCAGGTCg                   <  1:1928808/100‑1 (MQ=255)
                                                                                   aaaaGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAGAAGGCAGACGTATCCTGGAACAGACCGACTTTCAGGTCGc                  >  1:2342667/1‑100 (MQ=255)
                                                                                    aaaGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAGAAGGCAGACGTATCCTGGAACAGACCGACTTTCAGGTCGCt                 >  1:1798616/1‑100 (MQ=255)
                                                                                     gcgAAACCTCCGCAATGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAGAAGGCAGACGTATCCTGGAACAGACCGACTTTCAGGTCGCTg                >  2:2998822/3‑100 (MQ=255)
                                                                                     gcgAAACCTCCGCAATGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAGAAGGCAGACGTATACTGGAACAGACCGACTTTCAGGTCGCTg                >  1:1605355/3‑100 (MQ=255)
                                                                                     aaGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAGAAGGCAGACGTATCCTGGAACAGACCGACTTTCAGGTCGCTg                >  2:2121432/1‑100 (MQ=255)
                                                                                      cgAAACCTCCGCAATGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAGAAGGCAGACGTATCCTGGAACAGACCGACTTTCAGGTCGCTgg               >  2:515496/2‑100 (MQ=255)
                                                                                      cgAAACCTCCGCAATGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAGAAGGCAGACGTATCCTGGAACAGACCGACTTTCAGGTCGCTgg               >  1:2285198/2‑100 (MQ=255)
                                                                                       gAAACCTCCGCAATGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAGAAGGCAGACGTATCCTGGAACAGACCGACTTTCAGGTCGCTGGc              >  1:2212716/1‑100 (MQ=255)
                                                                                         naCCTCCGCAATGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAGAAGGCAGACGTATCCTGGAACAGACCGACTTTCAGGTCGCTGGCgg            >  1:1938285/2‑100 (MQ=255)
                                                                                         aaCCTCCGCAATGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAGAAGGCAGACGTATCCTGGAACAGACCGACTTTCAGGTCGCTGGCgg            >  1:399814/1‑100 (MQ=255)
                                                                                         aaCCTCCGCAATGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAGAAGGCAGACGTATCCTGGAACAGACCGACTTTCAGGTCGCTGGCgg            >  1:2202577/1‑100 (MQ=255)
                                                                                         aaCCTCCGCAATGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAGAAGGCAGACGTATCCTGGAACAGACCGACTTTCAGGTCGCTGGCgg            >  1:864182/1‑100 (MQ=255)
                                                                                          aCCTCCGCAATGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAGAAGGCAGACGTATCCTGGAACAGACCGACTTTCAGGTCGCTGGCGGt           >  1:2383935/1‑100 (MQ=255)
                                                                                          aCCTCCGCAATGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAGAAGGCAGACGTATCCTGGAACAGACCGACTTTCAGGTCGCTGGCGGt           >  1:1853591/1‑100 (MQ=255)
                                                                                           ccTCCGCATTGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAGACGGCAGACGTATCCTGGAACAGACCGACTTTCAGGTCGCTGGCGGta          >  2:2211018/1‑100 (MQ=255)
                                                                                           ccTCCGCAATGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAGAAGGCAGACGTATCCTGGAACAGACCGACTTTCAGGTCGCTGGCGGta          >  1:894097/1‑100 (MQ=255)
                                                                                             tCCGCATTGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAGAAGGCAGACGTATCCTGGAACAGACCGACTTTCAGGTCGCTGGCGGtata        >  1:1138597/1‑100 (MQ=255)
                                                                                             tCCGCATTGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAGAAGGCAGACGTATCCTGGAACAGACCGACTTTCAGGTCGCTGGCGGtata        <  1:556258/100‑1 (MQ=255)
                                                                                              ccGCATTGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAGAAGGCAGACGTATCCTGGAACAGACCGACTTTCAGGTCGCTGGCGGTATAg       <  2:2499940/100‑1 (MQ=255)
                                                                                              ccGCAATGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAGAAGGCAGACGTATCCTGGAACAGACCGACTTTCAGGTCGCTGGCGGTATAg       >  1:418097/1‑100 (MQ=255)
                                                                                                gCATTGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAGAAGGCAGACGTATCCTGGAACAGACCGACTTTCAGGTCGCTGGCGGTATAGAt     <  2:1193368/100‑1 (MQ=255)
                                                                                                 cgttGCGGAGGTTTCGCCTTTTGATACGCTGTCTGATTATAATCAGAAGGCAGACGTATCCTGGAACAGACCGACTTTCAGGTCGCTGGCGGTATAGATc    <  2:2258491/98‑1 (MQ=255)
                                                                                                   ttGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAGAAGGCAGACGTATCCTGGAACAGACCGACTTTCAGGTCGCTGGCGGTATAGATCAg  <  1:482221/100‑1 (MQ=255)
                                                                                                   ttGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAGAAGGCAGACGTATCCTGGAACAGACCGACTTTCAGGTCGCTGGCGGTATAGATCAg  <  1:482291/100‑1 (MQ=255)
                                                                                                   ttGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAGAAGGCAGACGTATCCTGGAACAGACCGACTTTCAGGTCGCTGGCGGTATAGATCAg  <  1:1290316/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
GCTGAATCAAAGGTCACAATGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCCGCATTGCGGAGGTTTCGCCTTTTGATACTCTGTCTGATTATAATCAGAAGGCAGACGTATCCTGGAACAGACCGACTTTCAGGTCGCTGGCGGTATAGATCAG  >  NC_000913/1015813‑1016011

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑