New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4404334 =537 (0.910)5 (0.010) 5/266 NT 0.99% intergenic (+30/‑52) hflC/yjeT HflB protease modulator specific for phage lambda cII repressor/DUF2065 family protein
?NC_000913 4404361 = 490 (0.860)intergenic (+57/‑25) hflC/yjeT HflB protease modulator specific for phage lambda cII repressor/DUF2065 family protein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 598 total aligned reads displayed.

TTCATCCGTAGCCTGCGTGCTTATGAGAACAGCTTCTCTGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGAAGAAGATGATCTCTGC  >  NC_000913/4404185‑4404483
                                                                                                                                                     |                                                                                                                                                     
ttCATCCGTAGCCTGCGTGCTTATGAGAACAGCTTCTCTGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGc                                                                                                                                                       <  2:3808832/150‑1 (MQ=255)
 tCATCCGTAGCCTGCGTGCTTATGAGAACAGCTTCTCTGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGcc                                                                                                                                                      <  2:7283354/150‑1 (MQ=255)
 aatattatcgggcaaattggtcatcgcagagatcatcttcttccatgccttcgggtaaagcatcggccctaaaccttccagtaccaaaaccagggcaagcgccagccagattgtcgaattcattcattatccttatagaaaaagaaaacc                                                                                                                                                      <  2:8959529‑M1/2‑1 (MQ=255)
   aTCCGTAGCCTGCGTTATTTTGAGACCAGCTTCTCTGGAAATCTGGACGTGATGTTCTTGAGCCCGTATAGCTATTTCTTCCGCTACATTAAGACGCCGACTTCCGAAACGCTTTAATATAACGACTGCGGTACAGGTCAATAAAGCCAc                                                                                                                                                    <  1:6463465/150‑1 (MQ=255)
   aTCCGTAGCCTGCGTGCTTATGAGAACAGCTTCTCTGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCAc                                                                                                                                                    >  1:36333/1‑150 (MQ=255)
    tCCGTAGCCTGCGTGCTTATGAGAACAGCTTCTCTGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCAcc                                                                                                                                                   >  2:5697783/1‑150 (MQ=255)
        aaGCCTGCGTGCTTATGAGAACAGCATCTCTGGCAATCAGGACGTGATGGTCATGAGAACGGATAGAGATTTCTTCCGCAACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTAAAGGTCAATAAAGCCACCGCAt                                                                                                                                               >  2:448712/2‑150 (MQ=255)
          gCCTGCGTGCTTATGAGAACAGCTTCTCTGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATcc                                                                                                                                             >  2:8884028/1‑150 (MQ=255)
              gCGTGCTTATGAGAACAGCTTCTCTGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAg                                                                                                                                         <  2:7115868/150‑1 (MQ=255)
                gTGATTTTGATAACAGCTTCTCTGGCAATCAGGACGTGTTGGTCTTGAGCCGGGATAGCGATTTCTTCCGCTACTTGAAGACGCCGACTTCCGCACCGCTTTAATATCGCGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAggg                                                                                                                                       <  1:7679085/150‑1 (MQ=255)
                 tGCTTATGAGAACAGCTTCTCTGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGa                                                                                                                                      >  1:9821192/1‑150 (MQ=255)
                    ttATGAGAACAGCTTCTCTGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGt                                                                                                                                   >  2:1842135/1‑150 (MQ=255)
                      aTGAGAACAGCTTCTCTGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCg                                                                                                                                 >  1:8734711/1‑150 (MQ=255)
                        gagaACAGCTTCTCTGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATCACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCggt                                                                                                                               >  2:4611951/1‑150 (MQ=255)
                         agtaCAGCTTCTCTGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGTCGCCGACTTCCGCAACGCGTTAATATATCGACTGCGGTACAGGTCAATAATGCCACCGCTTCCTCAGGGATGTGggtg                                                                                                                              >  2:6021748/4‑150 (MQ=255)
                          gaACAGCTTCTCTGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCggtgg                                                                                                                             >  2:4843568/1‑150 (MQ=255)
                              agatcatattcttccatgccttcggttaaagcatcggccctaaaccttccagtaccaaaacctgggcacgcgccagccatattgtcgaatacatacattatccttatagaaaaagaaagCCACCGCATCCTCAGGGATGTCGGTGGtttt                                                                                                                         >  1:2448411‑M1/120‑150 (MQ=255)
                               gCTTCTCTGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGttttc                                                                                                                        >  1:6706183/1‑150 (MQ=255)
                               gCTTCTCTGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGtttta                                                                                                                        >  1:8218814/1‑149 (MQ=255)
                                 ttCTCTGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGttttctt                                                                                                                      >  1:1376470/1‑150 (MQ=255)
                                  tctcTGGCAATCAGGACGTGATGGTCAGGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTTATATAACGACTGCGGTACAGGTCAATAAATCCACCGCATCCTCAGGGATGTCGGTGGttttcttt                                                                                                                     <  2:1367822/150‑1 (MQ=255)
                                  tctcTGGAAATCAGGACGTGCTGGTCTTGAGCCCGGTTAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATCACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGttttcttt                                                                                                                     <  1:4424795/150‑1 (MQ=255)
                                   ctctGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGttttctttt                                                                                                                    <  1:8004263/150‑1 (MQ=255)
                                   ctctGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGttttctttt                                                                                                                    <  2:2894104/150‑1 (MQ=255)
                                    tctGGCAATCAGGACGTGATGGTCATGCGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATAAAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGttttcttttt                                                                                                                   <  1:4638803/150‑1 (MQ=255)
                                    tctGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGttttcttttt                                                                                                                   >  1:962893/1‑150 (MQ=255)
                                    tctGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGttttcttttt                                                                                                                   >  1:6867451/1‑150 (MQ=255)
                                    tctGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGttttcttttt                                                                                                                   <  2:6302273/150‑1 (MQ=255)
                                    tctGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGttttcttttt                                                                                                                   >  1:5652869/1‑150 (MQ=255)
                                    tctGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGAGTTCGTCCGCTACATGACGACGCCGACTGCCGCACCGCGTTAATATCACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGttttcttttt                                                                                                                   <  2:9594411/150‑1 (MQ=255)
                                     ctGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGttttctttttc                                                                                                                  <  2:9348336/150‑1 (MQ=255)
                                      tGGCAATCAGGAGGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGttttctttttct                                                                                                                 <  2:5323128/150‑1 (MQ=255)
                                      tGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGttttctttttct                                                                                                                 >  2:7989595/1‑150 (MQ=255)
                                      tGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGttttctttttct                                                                                                                 >  1:1142651/1‑150 (MQ=255)
                                       ggCCATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCta                                                                                                                <  2:6895901/150‑1 (MQ=255)
                                        gCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCtat                                                                                                               >  2:9057778/1‑150 (MQ=255)
                                          aaTCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATaa                                                                                                             >  1:7475584/1‑150 (MQ=255)
                                           aTCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAg                                                                                                            >  2:2513797/1‑150 (MQ=255)
                                            tCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAgg                                                                                                           >  2:8268578/1‑150 (MQ=255)
                                              aGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGAt                                                                                                         >  1:1652945/1‑150 (MQ=255)
                                              aGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGAt                                                                                                         >  2:9240009/1‑150 (MQ=255)
                                                 aCGTGATGGTCATGTGCCGGGATTGCGTTTTCTTCCGCTAAATTAAGACGCCTTCTTCGGCAACTCGTTAATTTAACGTCTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATaat                                                                                                      <  1:3895341/150‑1 (MQ=255)
                                                    tGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATaatgaa                                                                                                   <  1:3045851/150‑1 (MQ=255)
                                                     gATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATaatgaat                                                                                                  >  2:3085373/1‑150 (MQ=255)
                                                        ggTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAAtgaatgaa                                                                                               >  1:8883659/1‑150 (MQ=255)
                                                          tCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGGTAATGAATGAAtt                                                                                             <  1:6389144/150‑1 (MQ=255)
                                                                gCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTCTAAGGATAATGAATGAATTCGACaa                                                                                       >  2:2310701/1‑150 (MQ=255)
                                                                    ggATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATctg                                                                                   >  1:7540620/1‑150 (MQ=255)
                                                                    ggATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATctg                                                                                   <  1:2726507/150‑1 (MQ=255)
                                                                          cGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCtggctggc                                                                             >  1:6258262/1‑150 (MQ=255)
                                                                          cGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCtggctggc                                                                             >  1:2531515/1‑150 (MQ=255)
                                                                                    cGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTg                                                                   >  1:9291581/1‑150 (MQ=255)
                                                                                       tACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGtt                                                                >  2:5130057/1‑150 (MQ=255)
                                                                                          aTGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTg                                                             <  1:9087707/150‑1 (MQ=255)
                                                                                           tGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTgg                                                            >  1:2179618/1‑150 (MQ=255)
                                                                                           tGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTgg                                                            <  2:2003710/150‑1 (MQ=255)
                                                                                           tGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTgg                                                            <  2:8734711/150‑1 (MQ=255)
                                                                                           tGAAGACGCCGACTTCCGCAACCCGTAAATATAACGACTGCGGTACAGGTCACTAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGTCTGGCGCTTGCCCTGGTTTTgg                                                            <  1:5960685/150‑1 (MQ=255)
                                                                                             aaGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTa                                                          >  2:4363172/1‑150 (MQ=255)
                                                                                             aaGACGCCGACTTCCGCAACGCGTGAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATCAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTa                                                          <  1:8587208/150‑1 (MQ=255)
                                                                                              aGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTAc                                                         <  2:9908784/150‑1 (MQ=255)
                                                                                                aCGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTg                                                       <  1:5105871/150‑1 (MQ=255)
                                                                                                   ccGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGaa                                                    <  2:3565775/150‑1 (MQ=255)
                                                                                                   ccGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGaa                                                    <  1:5413184/150‑1 (MQ=255)
                                                                                                   ccGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGaa                                                    >  2:4024981/1‑150 (MQ=255)
                                                                                                   ccGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGaa                                                    <  2:2075118/150‑1 (MQ=255)
                                                                                                    cGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAg                                                   <  1:7824640/150‑1 (MQ=255)
                                                                                                     gACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAg                                                                                                                                         <  2:1634312/63‑1 (MQ=255)
                                                                                                       cTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGtt                                                <  2:2367405/150‑1 (MQ=255)
                                                                                                         tCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTa                                              <  1:4944206/150‑1 (MQ=255)
                                                                                                          ccGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCTCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAg                                             <  1:1984098/150‑1 (MQ=255)
                                                                                                           cGCAACGCGTTAATATATCGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCTGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAgg                                            <  1:4371342/150‑1 (MQ=255)
                                                                                                           cGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAgg                                            <  1:6125001/150‑1 (MQ=255)
                                                                                                            gCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAggg                                           >  1:9020020/1‑150 (MQ=255)
                                                                                                            gCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAggg                                           >  2:5821094/1‑150 (MQ=255)
                                                                                                              aaCGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGcc                                         <  1:3413703/150‑1 (MQ=255)
                                                                                                                 gcgTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGTATGTATTCGACAATCTGGCTGGCGCTTGGCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGAt                                      >  1:1798472/1‑150 (MQ=255)
                                                                                                                    ttAATATAACGACTGCGGTACAGGTCAATCAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCt                                   <  2:8603173/150‑1 (MQ=255)
                                                                                                                       atatAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTa                                >  2:1096674/1‑150 (MQ=255)
                                                                                                                        tataACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTAc                               >  2:734925/1‑150 (MQ=255)
                                                                                                                         ataACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTAcc                              <  1:4180093/150‑1 (MQ=255)
                                                                                                                          taACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTGTTGGTACTGGAAGGTTTAGGGCCGATGCTTTAccc                             >  2:6139911/1‑150 (MQ=255)
                                                                                                                           aaCGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCg                            >  1:7298367/1‑150 (MQ=255)
                                                                                                                             cGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGaa                          <  2:8197036/150‑1 (MQ=255)
                                                                                                                             cGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGaa                          <  2:275901/150‑1 (MQ=255)
                                                                                                                                 tGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCa                      >  2:1724436/1‑150 (MQ=255)
                                                                                                                                        cAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGgaaga               <  1:10006027/150‑1 (MQ=255)
                                                                                                                                         aGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGgaagaa              <  1:9485190/150‑1 (MQ=255)
                                                                                                                                          ggTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGaagaag             <  2:3314946/150‑1 (MQ=255)
                                                                                                                                           gTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGACTTCGACAATCTGGCTGGCGCTTGCCCTGGTTGTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGAcgaaga            >  2:920085/1‑150 (MQ=255)
                                                                                                                                           gTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGAagaaga            >  2:6576578/1‑150 (MQ=255)
                                                                                                                                           gTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGGGTTGGTACTGGAAGGTTTAGGGCCGCTGCGTTACCCGAAGGCATGGAagaaga            >  2:8458744/1‑150 (MQ=255)
                                                                                                                                            tCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGAAGAAgat           <  2:7678332/150‑1 (MQ=255)
                                                                                                                                               aTAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGAAGAAgatgat        >  1:7123603/1‑150 (MQ=255)
                                                                                                                                               aTAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGAAGAAgatgat        <  1:4023004/150‑1 (MQ=255)
                                                                                                                                                   aGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGAAGAAGATGATctct    <  2:4297015/150‑1 (MQ=255)
                                                                                                                                                    gCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGAAGAAGATGATCTCTg   >  1:5790474/1‑150 (MQ=255)
                                                                                                                                                    gCCACCGCATCCTCAGGGATGTCGGTGGTTTTCATTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGAAGAAGATGATCTCTg   <  2:498412/150‑1 (MQ=255)
                                                                                                                                                     CCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGAAGAAGATGATCTCTGc  <  2:5411826‑M1/150‑1 (MQ=255)
                                                                                                                                                     CCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGAAGAAGATGATCTCTGc  >  2:2659846‑M1/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
TTCATCCGTAGCCTGCGTGCTTATGAGAACAGCTTCTCTGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGAAGAAGATGATCTCTGC  >  NC_000913/4404185‑4404483

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.