| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,390,016:1 | +C | 7.5% | intergenic (+52/+32) | yfbP → / ← nuoN | TPR‑like repeats‑containing protein/NADH:ubiquinone oxidoreductase, membrane subunit N |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,390,016 | 1 | . | C | 7.5% | 1329.6 / 102.2 | 293 | intergenic (+52/+32) | yfbP/nuoN | TPR‑like repeats‑containing protein/NADH:ubiquinone oxidoreductase, membrane subunit N |
| Reads supporting (aligned to +/- strand): ref base . (158/113); new base C (18/4); total (176/117) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.00e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.73e-01 | |||||||||||
Only 100 of 296 total aligned reads displayed.
TTCAGGAACGCTATGATTTTAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCGCGCTGTACTGCCA > NC_000913/2389867‑2390164 | ttCAGGAACGCTATGATTTTAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTGGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCTGAAAATCCGCCGTGCATg > 1:3484346/1‑150 (MQ=255) tCAGGAACGCTATGATTTTAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCATCTTTTTCAGAAAAACCGCCGAGCATG‑t > 2:2458485/1‑150 (MQ=255) aaagatttGATTTTATTATCGATGAATGGCGGGCAAAATTCTGGCATTTTTGTTTATAGTTTTTTTGCTATAGTAGTACACAGTTAACTTAACGATCTGCTTGTATATACTATACATTCTTTTTAAGAAAAACCGCCGAGCATG‑Tcggcg < 1:3095336/143‑1 (MQ=255) aCGCTATGATTTTAATATCTTTGAATGGCGGGCAAAATTCAGGCATTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTACACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGA‑CATGCTcggcgg < 1:2648578/150‑1 (MQ=255) tATGATTTTAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑Cttt > 2:3298993/1‑150 (MQ=255) tGATTTTAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCt < 2:778178/150‑1 (MQ=255) aTTTTAATATCGATGATTGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCATAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGa < 1:875631/150‑1 (MQ=255) aTTTTAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAG‑AAAGCCGCCGA‑CATGCTCGGCGG‑tttttctga < 2:649329/150‑6 (MQ=38) aTTTTAATATCGATGAAGGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGa < 1:947937/150‑1 (MQ=255) tttAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACt > 2:140676/1‑150 (MQ=255) tttAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACt < 2:724508/150‑1 (MQ=255) tAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTa > 1:317410/1‑150 (MQ=255) atCTATGAATGGCGGGAAAAATTAAGGAATTTATGTTTAGAGTATTTTGGCTATATTCGTACACATTTAACTTAACCCTCTCCGTCTAACTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACaaa < 1:1632099/150‑1 (MQ=255) atCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACaaa < 2:378491/150‑1 (MQ=255) tCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAg > 1:1542512/1‑150 (MQ=255) tCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAg > 2:3181069/1‑150 (MQ=255) gATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTa < 1:2326640/150‑1 (MQ=255) gATGAATGGCGGGCAAAATTCAGGCAGTTAGGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGACGAGCATG‑ACGGCGG‑CTTTCTGAATTACAAAgaa > 2:2362312/1‑148 (MQ=255) gAATGGCGGGCAAAATTCAGGCATTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACa < 1:2237752/150‑1 (MQ=255) gAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACa < 1:605128/150‑1 (MQ=255) gAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACa < 2:2084639/150‑1 (MQ=255) ggCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACAt > 2:3442220/1‑150 (MQ=255) gCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATc > 1:2075453/1‑150 (MQ=255) aaaaTTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAg > 2:3004722/1‑150 (MQ=255) aaaTTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGc > 1:923869/1‑150 (MQ=255) aaTTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCg < 1:2977762/150‑1 (MQ=255) aaTTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCg > 2:825432/1‑150 (MQ=255) ggCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTg < 2:1743035/150‑1 (MQ=255) ggCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTg < 2:4043755/150‑1 (MQ=255) gCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGc > 2:3673856/1‑150 (MQ=255) cAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGcc < 1:1842434/150‑1 (MQ=255) aaGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACACAGTAACAGATAACATCAGCGGCATTGcc > 2:2853904/2‑150 (MQ=255) aGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCa > 2:1038595/1‑150 (MQ=255) tttAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGcac > 1:1773078/1‑150 (MQ=255) tttAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGcac > 1:2364374/1‑150 (MQ=255) tttAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGcac > 1:1901539/1‑150 (MQ=255) gagTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATg < 1:3298993/150‑1 (MQ=255) gagTATTTGGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATg < 2:3492882/150‑1 (MQ=255) tATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTa < 1:2526637/150‑1 (MQ=255) ttGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCa < 1:2030736/150‑1 (MQ=255) tGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAATCCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTCCATCAGCGGCATTGCCAAACGCACAATGCTAATCAg > 1:3681760/1‑150 (MQ=255) gCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCg > 1:1008562/1‑150 (MQ=255) gCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCg < 1:3937078/150‑1 (MQ=255) gCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCg > 1:2706414/1‑150 (MQ=255) gATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGt > 2:2952007/1‑150 (MQ=255) gATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGt > 1:1671180/1‑150 (MQ=255) gATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGt > 1:1412491/1‑150 (MQ=255) tCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTgg < 2:2246352/150‑1 (MQ=255) gTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACAcc < 2:2569230/150‑1 (MQ=255) gTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACAcc > 1:2232524/1‑150 (MQ=255) ttCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACAccc > 1:3003879/1‑150 (MQ=255) tttactgtctGCGTGTTTGTACTATGCGTTGTTTTTAAGTAATTACGCGGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTAAATCAGCGGCATTGCGTAACGCACAATGCTAATCAGCGGTTGTGGCCATTGACGCAGCAc < 2:972022/143‑1 (MQ=255) ttAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCAc < 2:3344424/150‑1 (MQ=255) ttAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCAc < 1:3996593/150‑1 (MQ=255) ttAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCAc > 1:739081/1‑150 (MQ=255) tAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCAcc > 1:364150/1‑150 (MQ=255) aaCGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCa > 1:2969765/1‑150 (MQ=255) cGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGt < 1:895225/150‑1 (MQ=255) gCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTa > 2:835530/1‑150 (MQ=255) gCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTa < 2:1898431/150‑1 (MQ=255) ctctGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTAc > 2:1951128/1‑150 (MQ=255) ctctGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTAc < 1:1334926/150‑1 (MQ=255) ctctGCGTCTATCTACTATCCCTTCGTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACACAGTAACAGATTACATCAGCGGCATTGCCAAACGCTCAATGCTAATCAGCGGTTGTGGCCCTACTCCCAGCACCAGTAc > 2:1366710/1‑150 (MQ=255) ctGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCa > 1:3564452/1‑150 (MQ=255) tGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCaa < 1:1042816/150‑1 (MQ=255) gCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAAc < 2:1435086/150‑1 (MQ=255) tctaCTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCag > 1:2140093/1‑150 (MQ=255) actaTCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAgaga > 2:2743756/1‑150 (MQ=255) ctaTCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGAt > 2:1260012/1‑150 (MQ=255) taTCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATc > 2:161970/1‑150 (MQ=255) tCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAg > 1:3332953/1‑150 (MQ=255) ccTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCCGAGATCAGca > 1:3848829/1‑150 (MQ=255) ccTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGca < 1:3756684/150‑1 (MQ=255) cttcttTTTCAGAAAAACCGCCGAGTATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGcac > 2:2731041/1‑150 (MQ=255) cttcttTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGcac > 1:3057873/1‑150 (MQ=255) cttcttTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGcac > 2:238553/1‑150 (MQ=255) cttcttTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGcac > 2:1657570/1‑150 (MQ=255) ttcttTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGcaca > 1:1300891/1‑150 (MQ=255) gtcagaaagCCGCCGA‑CATGCTCGGCGGTTTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATa > 1:484517/6‑150 (MQ=38) gtcagaaagCCGCCGA‑CATGCTCGGCGGTTTTTCTGAATTAAAAAGTAACAGATTACATCAGCGGAATTGCCAAAAGCACAATGCTAATCATCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATAAGCACAACGATa > 1:2216572/6‑150 (MQ=25) tcagaaagCCGCCGA‑CATGCTCGGCGGTTTTTCTGACTTTCAAAGTAAAATATTAAATCAGCGGCATTGCCAAACGCACAATGCTAATAAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATAc > 1:2249199/5‑150 (MQ=37) tcagaaagCCGCCGA‑CATGCTCGGCGG‑TTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGGTGTGGCCATACACCCAGCACCAGGACCAACAGTGCCGAGATCAGCACAACGATAcc > 1:3418331/5‑150 (MQ=255) cagaaagCCGCCGA‑CATGCTCGGCGGTTTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCCTTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCCGAGATCAGCACAACGATAcc > 1:1191329/4‑150 (MQ=255) cagaaagCCGCCGA‑CATGCTCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATAccg > 2:1332669/4‑150 (MQ=255) aGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATAccg > 2:270313/1‑150 (MQ=255) aaaaCCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATAccgccc > 1:3260267/1‑150 (MQ=255) aaaaCCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATAccgccc < 1:3799625/150‑1 (MQ=255) agccgccgA‑CATGCTCGGCGGTTTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATAccgcccg > 2:1125850/3‑150 (MQ=255) ccgccgAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCgcgc > 2:1840284/1‑150 (MQ=255) ccgccgA‑CATGCTCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCgcgc > 2:2891566/1‑150 (MQ=255) cgccgAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCGCGCt < 2:487192/150‑1 (MQ=255) cgccgAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCGCGCt < 1:693654/150‑1 (MQ=255) gccgAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCGCGCTg > 2:910971/1‑150 (MQ=255) cgAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCGCGCTGTa < 2:3881514/150‑1 (MQ=255) gAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCGCGCTGTAc < 2:363342/150‑1 (MQ=255) gAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCGCGCTGTAc > 2:2307341/1‑150 (MQ=255) aGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCgcgc > 2:3377462/1‑144 (MQ=255) gCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCGCGCTGTACTg < 1:2806339/150‑1 (MQ=255) cATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCGCGCTGTACTGc > 2:3106882/1‑150 (MQ=255) tG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCGCGCTGTACTGCCa > 2:382405/1‑150 (MQ=255) | TTCAGGAACGCTATGATTTTAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCGCGCTGTACTGCCA > NC_000913/2389867‑2390164 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |