| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4456720 = | 214 (0.880) | 3 (0.010) | 3/262 | NT | 1.4% | coding (936/1374 nt) | mpl | UDP‑N‑acetylmuramate:L‑alanyl‑gamma‑D‑glutamyl‑ meso‑diaminopimelate ligase |
| ? | NC_000913 | 4456794 = | 207 (0.900) | coding (1010/1374 nt) | mpl | UDP‑N‑acetylmuramate:L‑alanyl‑gamma‑D‑glutamyl‑ meso‑diaminopimelate ligase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GGTATTCGAGCGCGGCTCCAGCACAGCAATAATGCGCGCCGTACCACCAACTTTGCCACGCAGCGCCGCCAGCGTTGCCAGAATCGCCGTCGGGTGATGGGCAAAATCGTCATATACCGTGACGCCATTCGCTTCACCACGCAACTCCAGACGGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4456876‑4456720‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacggcgaTTCTGGCAACGCTGGCGGCGCTGCGTGGCAAAGTTGGTGGTACGGCGCGCATTATTGCTGTGCTGGAGCCGCGCTCGAATACCATGAAAATGGGGATCTGCAAAGACGATCTGGCACCTTCATTAGGTCGTGCCGATGAAGTCTTCCT > NC_000913/4456794‑4456941 GGTATTCGAGCGCGGCTCCAGCACAGCAATAATGCGCGCCGTACCACCAACTTTGCCACGCAGCGCCGCCAGCGTTGCCAGAATCGCCGTCGGGTGATGGGCAAAATCGTCATCTACCGTGACGCCATTCGCTTCACCACGCAACTCCAG > 1:15157/1‑150GGTATTCGAGCGCGGCTCCAGCACAGCAATAATGCGCGCCGTACCACCAACTTTGCCACGCAGCGCCGCCAGCGTTGCCAGAATCGCCGTCGGGTGATGGGCAAAATCGTCATATACCGTGACGCCATTCGCTTCACCACGCACCTCCAG > 1:197019/1‑150GGTATTCGAGCGCGGCTCCAGCACAGCAATAATGCGCGCCGTACCACCAACTTTGCCACGCAGCGCCGCCAGCGTTGCCAGAATCGCCGTCGGGTGATGGGCAAAATCGTCATATACCGTGACGCCATTCGCTTCACCACGCAACTCCAG > 1:15212/1‑150GGTATTCGAGCGCGGCTCCAGCACAGCAATAATGCGCGCCGTACCACCAACTTTGCCACGCAGCGCCGCCAGCGTTGCCAGAATCGCCGTCGGGTGATGGGCAAAATCGTCATATACCGTGACGCCATTCGCTTCACCACGCAACTCCAG > 1:3982089/1‑150GGTATTCGAGCGCGGCTCCAGCACAGCAATAATGCGCGCCGTACCACCAACTTTGCCACGCAGCGCCGCCAGCGTTGCCAGAATCGCCGTCGGGTGATGGGCAAAATCGTCATATACCGTGACGCCATTCGCTTCACCACGCAACTCCAG > 1:2992012/1‑150GGTATTCGAGCGCGGCTCCAGCACAGCAATAATGCGCGCCGTACCACCAACTTTGCCACGCAGCGCCGCCAGCGTTGCCAGAATCGCCGGCGGGTGATGGGCAAAATCGTCATATACCGTGACGCCATTCGCTTCACCACGCAACTCCAG > 2:2005645/1‑150 GTATTCGAGCGCGGCTCCAGCACAGCAATAATGCGCGCCGTACCACCAACTTTGCCACGCAGCGCCGCCAGCGTTGCCAGAATCGCCGTCGGGTGATGGGCAAAATCGTCATATACCGTGACGCCATTCGCTTCACCACGCAACTCCAGA < 2:3808525/150‑1 GTATTCGAGCGCGGCTCCAGCACAGCAATAATGCGCGCCGTACCACCAACTTTGCCACGCAGCGCCGCCAGCGTTGCCAGAATCGCCGTCGGGTGATGGGCAAAATCGTCATATACCGTGACGCCATTCGCTTCACCACGCAACTCCAGA > 2:3892778/1‑150 GTATTCGAGCGCGGCTCCAGCACAGCAATAATGCGCGCCGTACCACCAACTTTGCCACGCAGCGCCGCCAGCGTTGCCAGAATCGCCGTCGGGTGATGGGCAAAATCGTCATATACCGTGACGCCATTCGCTTCACCACGCAACTCCAGA < 2:1591853/150‑1 GTATTCGAGCGCGGCTCCAGCACAGCAATAATGCGCGCCGTACCACCAACTTTGCCACGCAGCGCCGCCAGCGTTGCCAGAATCGCCGTCGGGTGATGGGCAAAATCGTCATATACCGTGACGCCATTCGCTTCACCACGCAACTCCAGA < 1:2677251/150‑1 TATTCGAGCGCGGCTCCAGCACAGCAATAATGCGCGCCGTACCACCAACTTTGCCACGCAGCGCCGCCAGCGTTGCCAGAATCGCCGTCGGGTGATGGGCAAAATCGTCATATACCGTGACGCCATTCGCTTCACCACGCAACTCCAGAC < 2:3227360/150‑1 TATTCGAGCGCGGCTCCAGCACAGCAATAATGCGCGCCGTACCACCAACTTTGCCACGCAGCGCCGCCAGCGTTGCCAGAATCGCCGTCGGGTGATGGGCAAAATCGTCATATACCGTGACGCCATTCGCTTCACCACGCAACTCCAGAC > 2:3247339/1‑150 TTCGAGCGCGGCTCCAGCACAGCAATAATGCGCGCCGTACCACCAACTTTGCCACGCAGCGCCGCCAGCGTTGCCAGAATCGCCGTCGGGTGATGGGCAAAATCGTCATATACCGTGACGCCATTCGCTTCACCACGCAACTCCAGACGG > 2:2252056/1‑150 TTCGAGCGCGGCTCCAGCACAGCAATAATGCGCGCCGTACCACCAACTTTGCCACGCAGCGCCGCCAGCGTTGCCAGAATCGCCGTCGGGTGATGGGCAAAATCGTCATATACCGTGACGCCATTCGCTTCACCACGCAACTCCAGACGG < 1:1248064/150‑1 TTCGAGCGCGGCTCCAGCACAGCAATAATGCGCGCCGTACCACCAACTTTGCCACGCAGCGCCGCCAGCGTTGCCAGAATCGCCGTCGGGTGATGGGCAAAATCGTCATATACCGTGACGCCATTCGCTTCACCACGCAACTCCAGACGG < 1:1247891/150‑1 TCGAGCGCGGCTCCAGCACAGCAATAATGCGCGCCGTACCACCAACTTTGCCACGCAGCGCCGCCAGCGTTGCCAGAATCGCCGTCGGGTGATGGGCAAAATCGTCATATACCGTGACGCCATTCGCTTCACCACGCAACTCCAGACGGC < 1:1801880/150‑1 TCGAGCGCGGCTCCAGCACAGCAATAATGCGCGCCGTACCACCAACTTTGCCACGCAGCGCCGCCAGCGTTGCCAGAATCGCCGTCGGGTGATGGGCAAAATCGTCATATACCGTGACGCCATTCGCTTCACCACGCAACTCCAGACGGC > 1:1757199/1‑150 GAGCGCGGCTCCAGCACAGCAATAATGCGCGCCGTACCACCAACTTTGCCACGCAGCGCCGCCAGCGTTGCCAGAATCGCCGTCGGGTGATGGGCAAAATCGTCATATACCGTGACGCCATTCGCTTCACCACGCAACTCCAGACGGCGA > 1:52785/1‑150 CAGAATCGCCGTCGGGTGATGGGCAAAATCGTCATATACCGTGACGCCATTCGCTTCACCACGCAACTCCAGACGGCGATTCTGGCAACGCTGGCGGCGCTGCGTGGCAAAGTTGGTGGTACGGCGCGCATTATTGCTGTGCTGGAGCCG > 2:4102517/1‑150 TCGCCGTCGGGTGATGGGCAAAATCGTCATATACCGTGACGCCATTCGCTTCACCACGCAACTCCAGACGGCGATTCTGGCAACGCTGGCGGCGCTGCGTGGCAAAGTGGGTGGTACGGCGCGCATTATTGCTGTGCTGGAGCCGCGCTC > 2:2491088/1‑150 GCAACTCCAGACGGCGATTCTGGCAACGCTGGCGGCGCTGCGTGGCAAAGTTGGTGGTACGGCGCGCATTATTGCTGTGCTGGAGCCGCGCTCGAATACCATGAAAATGGGGATCTGCAAAGACGATCTGGCACCTTCATTAGGTCGTGC < 1:2491088/150‑1 GACGGCGATTCTGGCAACGCTGGCGGCGCTGCGTGGCAAAGTTGGTGGTACGGCGCGCATTATTGCTGTGCTGGAGCCGCGCTCGAATACCATGAAAATGGGGATCTGCAAAGACGATCTGGCACCTTCATTAGGTCGTGCCGATGAAGT > 2:1296985/1‑150 GACGGCGATTCTGGCAACGCTGGCGGCGCTGCGTGGCAAAGTTGGTGGTACGGCGCGCATTATTGCTGTGCTGGAGCCGCGCTCGAATACCATGAAAATGGGGATCTGCAAAGACGATCTGGCACCTTCATTAGGTCGTGCCGATGAAGT > 1:2834079/1‑150 GACGGCGATTCTGGCAACGCTGGCGGCGCTGCGTGGCAAAGTTGGTGGTACGGCGCGCATTATTGCTGTGCTGGAGCCGCGCTCGAATACCATGAAAATGGGGATCTGCAAAGACGATCTGGCACCTTCATTAGGTCGTGCCGATGAAGT > 2:1739375/1‑150 GACGGCGATTCTGGCAACGCTGGCGGCGCTGCGTGGCAAAGTTGGTGGTACGGCGCGCATTATTGCTGTGCTGGAGCCGCGCTCGAATACCATGAAAATGGGGATCTGCAAAGACGATCTGGCACCTTCATTAGGTCGTGCCGATGAAGT > 1:2834072/1‑150 GACGGCGATTCTGGCAACGCTGGCGGCGCTGCGTGGCAAAGTTGGTGGTACGGCGCGCATTATTGCTGTGCTGGAGCCGCGCTCGAATACCATGAAAATGGGGATCTGCAAAGACGATCTGGCACCTTCATTAGGTCGTGCCGATGAAGT > 2:3118284/1‑150 ACGGCGATTCTGGCAACGCTGGCGGCGCTGCGTGGCAAAGTTGGTGGTACGGCGCGCATTATTGCTGTGCTGGAGCCGCGCTCGAATACCATGAAAATGGGGATCTGCAAAGACGATCTGGCACCTTCATTAGGTCGTGCCGATGAAGTC < 2:2111242/150‑1 ACGGCGATTCTGGCAACGCTGGCGGCGCTGCGTGGCAAAGTTGGTGGTACGGCGCGCATTATTGCTGTGCTGGAGCCGCGCTCGAATACCATGAAAATGGGGATCTGCAAAGACGATCTGGCACCTTCATTAGGTCGTGCCGATGAAGTC < 2:2111287/150‑1 ACGGCGATTCTGGCAACGCTGGCGGCGCTGCGTGGCAAAGTTGGTGGTACGGCGCGCATTATTGCTGTGCTGGAGCCGCGCTCGAATACCATGAAAATGGGGATCTGCAAAGACGATCTGGCACCTTCATTAGGTCGTGCCGATGAAGTC < 2:2856942/150‑1 GCGATTCTGGCAACGCTGGCGGCGCTGCGTGGCAAAGTTGGTGGTACGGCGCGCATTATTGCTGTGCTGGAGCCGCGCTCGAATACCATGAAAATGGGGATCTGCAAAGACGATCTGGCACCTTCATTAGGTCGTGCCGATGAAGTCTTC < 1:1232743/150‑1 GCGATTCTGGCAACGCTGGCGGCGCTGCGTGGCAAAGTTGGTGGTACGGCGCGCATTATTGCTGTGCTGGAGCCGCGCTCGAATACCATGAAAATGGGGATCTGCAAAGACGATCTGGCACCTTCATTAGGTCGTGCCGATGAAGTCTTC < 1:95949/150‑1 GCGATTCTGGCAACGCTGGCGGCGCTGCGTGGCAAAGTTGGTGGTACGGCGCGCATTATTGCTGTGCTGGAGCCGCGCTCGAATACCATGAAAATGGGGATCTGCAAAGACGATCTGGCACCTTCATTAGGTCGTGCCGATGAAGTCTTC < 1:1232742/150‑1 GCGATTCTGGCAACACTGGCGGCGCTGCGTGGCAAAGTTGGTGGTACGGCGCGCATTATTGCTGTGCTGGAGCCGCGCTCGAATACCATGAAAATGGGGATCTGCAAAGACGATCTGGCACCTTCATTAGGTCGTGCCGATGAAGTCTTC < 2:3998956/150‑1 CGATTCTGGCAACGCTGGCGGCGCTGCGTGGCAAAGTTGGTGGTACGGCGCGCATTATTGCTGTGCTGGAGCCGCGCTCGAATACCATGAAAATGGGGATCTGCAAAGACGATCTGGCACCTTCATTAGGTCGTGCCGATGAAGTCTTCC < 2:2492240/150‑1 CGATTCTGGCAACGCTGGCGGCGCTGCGTGGCAAAGTTGGTGGTACGGCGCGCATTATTGCTGTGCTGGAGCCGCGCTCGAATACCATGAAAATGGGGATCTGCAAAGACGATCTGGCACCTTCATTAGGTCGTGCCGATGAAGTCTTCC < 2:900556/150‑1 GATTCTGGCAACGCTGGCGGCGCTGCGTGGCAAAGTTGGTGGTACGGCGCGCATTATTGCTGTGCTGGAGCCGCGCTCGAATACCATGAAAATGGGGATCTGCAAAGACGATCTGGCACCTTCATTAGGTCGTGCCGATGAAGTCTTCCT < 2:1478380/150‑1 GATTCTGGCAACGCTGGCGGCGCTGCGTGGCAAAGTTGGTGGTACGGCGCGCATTATTGCTGTGCTGGAGCCGCGCTCGAATACCATGAAAATGGGGATCTGCAAAGACGATCTGGCACCTTCATTAGGTCGTGCCGATGAAGTCTTCCT > 2:1007935/1‑150 GGTATTCGAGCGCGGCTCCAGCACAGCAATAATGCGCGCCGTACCACCAACTTTGCCACGCAGCGCCGCCAGCGTTGCCAGAATCGCCGTCGGGTGATGGGCAAAATCGTCATATACCGTGACGCCATTCGCTTCACCACGCAACTCCAGACGGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4456876‑4456720‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacggcgaTTCTGGCAACGCTGGCGGCGCTGCGTGGCAAAGTTGGTGGTACGGCGCGCATTATTGCTGTGCTGGAGCCGCGCTCGAATACCATGAAAATGGGGATCTGCAAAGACGATCTGGCACCTTCATTAGGTCGTGCCGATGAAGTCTTCCT > NC_000913/4456794‑4456941 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |