Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,959,481 C→G 7.2% intergenic (+36/+51) ilvC → / ← ppiC ketol‑acid reductoisomerase, NAD(P)‑binding/peptidyl‑prolyl cis‑trans isomerase C (rotamase C)

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,959,4810CG 7.2% 725.6 / 39.5 209intergenic (+36/+51)ilvC/ppiCketol‑acid reductoisomerase, NAD(P)‑binding/peptidyl‑prolyl cis‑trans isomerase C (rotamase C)
Reads supporting (aligned to +/- strand):  ref base C (72/119);  new base G (5/10);  total (80/129)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.08e-01

Only 100 of 220 total aligned reads displayed.

AACGGGCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCGA  >  NC_000913/3959332‑3959629
                                                                                                                                                     |                                                                                                                                                    
aaCGGGCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCcac                                                                                                                                                      <  2:2761784/150‑1 (MQ=255)
 aCGGGCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCcaca                                                                                                                                                     <  1:4045893/150‑1 (MQ=255)
   gggCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCCACCCGCTCCCACagg                                                                                                                                                   >  1:181638/1‑150 (MQ=255)
   gggCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAGGCCCACACCCCGACCCTCTCCCACcgg                                                                                                                                                   >  1:2275574/1‑150 (MQ=255)
    ggCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCACACCCCCACCCACACCCCCcggg                                                                                                                                                  >  2:2045503/1‑150 (MQ=255)
     gCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACaggga                                                                                                                                                 <  2:3400129/150‑1 (MQ=255)
       aaCTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACagggaga                                                                                                                                               <  1:2179138/150‑1 (MQ=255)
         cTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTCTATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCTGtgggagagg                                                                                                                                             <  1:3128185/150‑1 (MQ=255)
         cTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCTGtgggagagg                                                                                                                                             <  1:2779757/150‑1 (MQ=255)
         cTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCTGtgggagagg                                                                                                                                             <  1:3452005/150‑1 (MQ=255)
         cTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACagggagagg                                                                                                                                             <  1:3577231/150‑1 (MQ=255)
         cTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACagggagagg                                                                                                                                             <  1:1944309/150‑1 (MQ=255)
          tGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGTAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCACCCCCacggagaggg                                                                                                                                            >  1:2756913/1‑150 (MQ=255)
          tGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGTAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCACTCCCACagggagaggg                                                                                                                                            >  1:678639/1‑150 (MQ=255)
            cGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCACCCACagggagggggag                                                                                                                                          >  1:2845959/1‑150 (MQ=255)
              tGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAGGCCCGCACCCCCACCCACTCCCCCAGGGAGAGGGAGaa                                                                                                                                        >  1:3290975/1‑150 (MQ=255)
               gATGTGAACGTAGCGATTCGCAGCCATGCGATTTAGCAGGTTGGTAAGAAACTGCGGGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGGGCGCTGATGCCCTCACCCCGACCCTCTCCCTCAGGGAGAGGGAGaaa                                                                                                                                       <  1:2547981/150‑1 (MQ=38)
               gATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGGCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGaaa                                                                                                                                       <  1:2472034/150‑1 (MQ=255)
               gATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGaaa                                                                                                                                       <  2:732369/150‑1 (MQ=255)
               gATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGATATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGaaa                                                                                                                                       <  2:344850/150‑1 (MQ=255)
                aTGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCCCAGGGAGAGGGAGaaaa                                                                                                                                      >  1:647360/1‑150 (MQ=255)
                aTGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCACTCCCACAGGGAGAGGGAGaaaa                                                                                                                                      >  1:2502356/1‑150 (MQ=255)
                     aaCGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAGGCCCACACCCCCACCCTCTCCCACAGGGAGTGGGAGTAAacaata                                                                                                                                 >  1:912745/1‑147 (MQ=255)
                       cGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCaa                                                                                                                               <  2:639297/150‑1 (MQ=255)
                                tCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTgctc                                                                                                                      <  2:4081701/150‑1 (MQ=255)
                                  gCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCt                                                                                                                    <  1:316020/150‑1 (MQ=255)
                                  gCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCt                                                                                                                    <  1:3670370/150‑1 (MQ=255)
                                  gCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCGAACCCCGAACCACTCCCACCGGGAGAGGGCGAAAACACACAAGGCCATCTccg                                                                                                                    >  2:3202670/1‑149 (MQ=255)
                                   cAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTg                                                                                                                   <  1:2085521/150‑1 (MQ=255)
                                     gCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGga                                                                                                                 <  2:2418844/150‑1 (MQ=255)
                                     gCCATGCGAGTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGga                                                                                                                 <  2:3139092/150‑1 (MQ=255)
                                        cggCGAGTGAGCAGGTAGGTAAGAAACTGCGCGGCGAGATGACAGATAGGACCCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGTCCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTGCTCCTGGAGaa                                                                                                              <  2:3760077/148‑1 (MQ=37)
                                        aTGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTCTATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGATAAAACACTCAAGGCCTTCTCCTGGAGaa                                                                                                              <  2:3859384/150‑1 (MQ=255)
                                        aTGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGaa                                                                                                              <  2:2222287/150‑1 (MQ=255)
                                        aTGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGaa                                                                                                              <  1:3419410/150‑1 (MQ=255)
                                         tGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAg                                                                                                             <  2:2460094/150‑1 (MQ=255)
                                         tGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAGGCCCACACCCCCACCCACACCCACACGGGGAGGGGGAAAACACACAAGGCCATATCCAGGAGAAg                                                                                                             >  1:3196114/1‑150 (MQ=255)
                                           cGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCCCACCACTACCACAGGGAGAGGGAGAAAAAAATCAAGGCCATCTCCTGGAGAAGGc                                                                                                           >  2:1699001/1‑150 (MQ=38)
                                           cGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAGGGCCTCAACCCCAACCAAAACCACAGGGAGAGGGTGAAAAAACACAATGCCTTGTACTggtggatgc                                                                                                           >  1:304091/1‑143 (MQ=255)
                                             aTTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCAGGAGAAGGCCt                                                                                                         <  2:429690/150‑1 (MQ=255)
                                             aTTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCAGGAGAAGGCCt                                                                                                         <  2:1502751/150‑1 (MQ=255)
                                              ttGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCGCACCCCCCCCCACACCCACACGGAGAGGGAGCAAACACACAATGCCATAAACGGGAGAAGGccgt                                                                                                        >  2:1530458/1‑148 (MQ=255)
                                               tGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCCACCCTCAACCACAGGGCGGGGGGGAAAAAAAACAAGGCCATATCCGGGTGAAGGCCATg                                                                                                       >  2:78546/1‑150 (MQ=255)
                                                gAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCCCCCCGACCCTCTCCCCCCGGGAGAGGGAGAAAACCCGCAAGGCCATCTCCGGGAGAAGGCCTTGc                                                                                                      >  2:4018899/1‑150 (MQ=255)
                                                gAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCCACCCACTCCCACAGGGAGAGGGAGAAAACACTCCAGGGCTTCTCCGGGAGAAGGCCTTGc                                                                                                      >  1:3358449/1‑150 (MQ=38)
                                                  gCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTa                                                                                                    <  1:3442952/150‑1 (MQ=255)
                                                           taAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCACCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCGCCTGGAGAAGGCCTTGCTATTAGTTGCg                                                                                           >  2:1001146/1‑150 (MQ=255)
                                                           taAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCACAACCCGACCCTCACCCCCACGGTGAGGGAGAAAACACTCAAGGCCATCACCTGGCGCAGGCCGTGCAATTAGTTGCg                                                                                           >  2:1994458/1‑150 (MQ=255)
                                                            aaGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCCCCCCACACCCACACGGTGGGGGGGAAAACAATCAATGCCATCTCCAGGAGAAGGCCGTGCTAATAGTTGCgg                                                                                          >  1:1624102/1‑150 (MQ=255)
                                                            aaGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAGGCCCACACCCCGACCCACACCCAACGGGAGAGGGAGAAAAAACACAAAGCCAAAACCAGGAGAAGGCCGTGCTATTAGTTGCgg                                                                                          >  1:3756721/1‑150 (MQ=255)
                                                               aaaCTGCGCGGCTATATGACAGATATGAAACGTATTGCTGATGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCGCACCCCCAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCAGGAGAAGGCCGTGCTATTAGTTGCGGTAc                                                                                       >  2:1834080/1‑150 (MQ=38)
                                                                   tGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAGGGCCGCACCCCCCCCCCCGCCCACACGGAGAGGGGGGAAAAACAAAAAGCCAACTCCAGGAGCAGGGCGTGGTATTATTTTGGGTTCAGCa                                                                                   >  1:11826/1‑150 (MQ=255)
                                                                    gcgcGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCAc                                                                                  <  2:2087584/150‑1 (MQ=255)
                                                                         gCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTGCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTaa                                                                             <  2:1532517/150‑1 (MQ=255)
                                                                          cTATATGACAGATATGACACGTATTGCTGGTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAat                                                                            <  1:2788/150‑1 (MQ=255)
                                                                          cTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAat                                                                            <  1:1181954/150‑1 (MQ=255)
                                                                           tataTGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAatg                                                                           <  2:1276452/150‑1 (MQ=255)
                                                                              atGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAatgatg                                                                        <  1:3562092/150‑1 (MQ=255)
                                                                                 aCAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGa                                                                     <  2:1827662/150‑1 (MQ=255)
                                                                                 aCAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTAACCCCGACCCAAACCCACAGGGGGAGGGAGAAAAAAAACAATGCCATCACCAGGAGAAGGCCGTGCTAATAGTTTCGGTACAGCACCATAaagattttt                                                                     >  1:2935372/1‑146 (MQ=255)
                                                                                   aGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCCCCCCGACCCTCTCCCACCGGGGGAGGGAGAAAACACACAAGGCCGTCTCCTGGAGAAGGCCGTGCTATTAGTTGCGGTACAGCACCGTAAAGATGTGata                                                                   >  2:3005658/1‑150 (MQ=255)
                                                                                     atatGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTGCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATc                                                                 <  2:881348/150‑1 (MQ=255)
                                                                                     atatGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAGGCCCCCCCCCCCACCCGCTCCCCCCGGGCGAGGGCGAAAACACCCAACGCCGTCGCCGGGAGACCGCCATGCGATTAGGTGCGGTACAGCACCGTAATGAGGGGATATc                                                                 >  2:2998894/1‑150 (MQ=255)
                                                                                                aTTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCGCACCCCCACCCACTCCCACAGGGAGAGGGCGAAAACAAGCAAGGCCATCTCCTGGAGAAGGCCATGCTAATAGTTGCGGTACAGCACCAAAAAGATGTGATATCCGCACAGGgtg                                                      >  2:3325345/1‑150 (MQ=255)
                                                                                                    cTGTTGCGGGTTAAGTGCGCGCTGATTGCCTCACCCCGACCCTCTCCCACAGGGTGTGGGTGTAAAAACTGAAGGGCTTGTGCTGGGGTAGGCCTTGGTTTTAGTTTCGGTTCAGCACCTTTATGATTTGTTTTACGTAGTGGGtgtggg                                                  >  2:1633363/1‑148 (MQ=255)
                                                                                                    cTGTTGCGGGTTAAGTGCGCGCTGATGCCCACACCCCGACCCACTCCCACAGGGAGAGGGACAAAACACACAAGGCCCTCTCCGGGGGAACGGCGTGCTATTAGTTGCGGTACAGCACCAAAATGATGTGCTATCCCAACACGGTGTGcc                                                  >  2:2292224/1‑149 (MQ=255)
                                                                                                       ttGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCg                                               <  1:2192009/150‑1 (MQ=255)
                                                                                                         gCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCggg                                             <  2:3968104/150‑1 (MQ=255)
                                                                                                         gCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCggg                                             <  1:2366200/150‑1 (MQ=255)
                                                                                                            ggTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCg                                          <  2:1019199/150‑1 (MQ=255)
                                                                                                            ggTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCg                                          <  1:1329407/150‑1 (MQ=255)
                                                                                                                 aGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCgg                                     <  2:2009098/150‑1 (MQ=255)
                                                                                                                 aGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCgg                                     <  2:2521284/150‑1 (MQ=255)
                                                                                                                  gTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGc                                    <  1:1937221/150‑1 (MQ=255)
                                                                                                                  gTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGc                                    <  1:93044/150‑1 (MQ=255)
                                                                                                                  gTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTAGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGc                                    <  1:3088013/150‑1 (MQ=255)
                                                                                                                   tGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCGTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCt                                   <  1:52930/150‑1 (MQ=255)
                                                                                                                      gcgcTGCTGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCa                                <  1:152787/150‑1 (MQ=255)
                                                                                                                      gcgcTGATGCCCTCACCCCGACCCTCTCCCACCGGGAGAGGGAGAAAACACTCAAGGCCGTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCa                                <  1:2399990/150‑1 (MQ=255)
                                                                                                                          tGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTAc                            <  1:1691753/150‑1 (MQ=255)
                                                                                                                            aTGCCCTCACCCCGACCCTCTCCCACCGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCGGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGCACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCg                          >  2:1064472/1‑150 (MQ=255)
                                                                                                                            aTGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCg                          >  2:1064515/1‑150 (MQ=255)
                                                                                                                            aTGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCg                          <  1:4112411/150‑1 (MQ=255)
                                                                                                                                 cTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCCAGGCCTTCTCCTGGAGCAGGCCTTGCTCTTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCCGCGGGCCGGTCGGCTCCAGGACCGGACag                     >  2:1862720/1‑149 (MQ=255)
                                                                                                                                 cTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGACCTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACaa                     >  2:1161310/1‑150 (MQ=255)
                                                                                                                                  tCACCCCGACCCTCTCCCACAGGGCGAGGGAGAAAACACTCAAGGCCGTCTCCTGGAGAAGGCCTTGCTCTTAGTTGCGGGACCGCACCGTCATGATGTGATATCCGCCCGGGGTGTGCAGCGGGCCGGGCGGCCCCAGTCCCGGACAag                    >  2:3292761/1‑150 (MQ=255)
                                                                                                                                   cACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAaga                   <  1:1753997/150‑1 (MQ=255)
                                                                                                                                   cACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCGGCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAaga                   <  1:1057129/150‑1 (MQ=255)
                                                                                                                                      cccGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGaa                <  1:3971140/150‑1 (MQ=255)
                                                                                                                                      cccGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCATGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGaa                >  2:3580141/1‑150 (MQ=255)
                                                                                                                                        cGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGaaaa              <  1:807903/150‑1 (MQ=255)
                                                                                                                                        cGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGaaaa              <  2:2527443/150‑1 (MQ=255)
                                                                                                                                          tcccTCTCCCTGTGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAAcc            >  2:2603372/2‑150 (MQ=255)
                                                                                                                                             ctctCCCTGTGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACt         >  1:237078/1‑150 (MQ=255)
                                                                                                                                             ctctCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGACCTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACt         >  1:2866755/1‑150 (MQ=255)
                                                                                                                                              tctcCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTCTTAGTTGCGGTACAGCACCTTAATGAGGTGATAGCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGGCAAGAGAAAACCACtt        >  1:2647367/1‑150 (MQ=255)
                                                                                                                                                  ccACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATc    >  1:2238860/1‑150 (MQ=255)
                                                                                                                                                    acaGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCGa  >  1:3885918/1‑150 (MQ=255)
                                                                                                                                                    acaGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCGa  >  1:182384/1‑150 (MQ=255)
                                                                                                                                                    acaGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCGa  >  1:545800/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
AACGGGCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCGA  >  NC_000913/3959332‑3959629

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: