| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,104,934 | A→C | 5.2% | intergenic (+32/‑27) | csgA → / → csgC | curlin subunit, amyloid curli fibers, cryptic/curli assembly protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,104,934 | 0 | A | C | 5.2% | 422.7 / 8.4 | 139 | intergenic (+32/‑27) | csgA/csgC | curlin subunit, amyloid curli fibers, cryptic/curli assembly protein |
| Reads supporting (aligned to +/- strand): ref base A (59/71); new base C (3/5); total (63/76) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.30e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.63e-01 | |||||||||||
Only 100 of 139 total aligned reads displayed.
CGGTTAAACAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTGTCTGTGCAGAG > NC_000913/1104787‑1105081 | gTTAAACAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGccc < 1:1823969/150‑1 (MQ=255) aaCAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑tt > 2:169837/1‑150 (MQ=255) aaCAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑tt > 2:56974/1‑150 (MQ=255) aaCAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGACCTG‑tt > 1:658219/1‑150 (MQ=255) cAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACTGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCTTGCGCCCTG‑tttc < 1:391189/150‑2 (MQ=255) cAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCTTGCGCCCTG‑tttc < 2:975380/150‑2 (MQ=255) gTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCTTGCGCCCTG‑tttctg < 2:1342194/150‑4 (MQ=255) ttCGGTGGTTGCAAAGTTGCTTCAGTTTAACAGACTTCATATAAATACTCCTTAAACGTGACTCATTTTGGCTTTGGTAACAAATCGACATATCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCTCAAGCCCTG‑ttttttt < 2:1288252/150‑1 (MQ=255) gggtgggGGCAACGGTGCTGCATTTTACCAGACTGAATCTAACTCCTCAGTCAAAGTGACGCAGGTTGGCGTTGGTAACAACGCGACCGCTCATCAGTACTAATACAGCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTc < 2:1003612/149‑1 (MQ=255) cggcggTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTc < 2:1175579/150‑1 (MQ=255) gggggtggCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCg < 1:618987/147‑1 (MQ=255) gtggtgGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGGTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAACCAGGGCGCAAGCCCTG‑TTTTTTTTCgg < 2:249228/150‑1 (MQ=255) gtggtgGCAAAGGTGCTGCAGGTGTCCAGCCTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTTGTAACAACGCGACCGCGCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCgg < 2:49675/150‑1 (MQ=255) tggtggCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACTACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCggg < 2:1548391/150‑1 (MQ=255) tggtggCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCggg < 2:1488725/150‑1 (MQ=255) tggtggCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCggg < 2:1189460/150‑1 (MQ=255) tggtggCAACGGTGCGGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCggg < 1:1591924/150‑1 (MQ=255) gtggCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGgag > 1:874788/1‑150 (MQ=255) gtggCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGgag < 2:405638/150‑1 (MQ=255) cAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGagaaga < 2:1220223/150‑1 (MQ=255) ctgcAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAAt > 2:892825/1‑150 (MQ=255) ctgcAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAAt > 1:1395053/1‑150 (MQ=255) ctgcAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAAt > 2:709457/1‑150 (MQ=255) tgcAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATa > 1:1725827/1‑150 (MQ=255) tgcAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGGGACTCAGGTTGGCTTTGGTAACAACGCGCCCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGAGCTAGCCCTG‑TTTTTTTTCGGGAGATGAATATGACTa > 2:1684255/1‑150 (MQ=255) gcAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATAc > 1:1649863/1‑150 (MQ=255) cAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACg > 1:1403000/1‑150 (MQ=255) aGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGt > 1:409999/1‑150 (MQ=255) aGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGt < 1:1451279/150‑1 (MQ=255) gTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGtt > 2:1785677/1‑150 (MQ=255) aCCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGttatta > 2:1078441/1‑150 (MQ=255) cAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGACCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACt > 2:1334893/1‑150 (MQ=255) aGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTc < 1:1222408/150‑1 (MQ=255) cATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCg > 2:1359183/1‑150 (MQ=255) cATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCg < 2:321648/150‑1 (MQ=255) aTCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCgg < 1:1230007/150‑1 (MQ=255) aTCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCgg < 2:1550737/150‑1 (MQ=255) tCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGc > 2:520559/1‑150 (MQ=255) tCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGc < 2:1763041/150‑1 (MQ=255) tCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGc < 2:1477277/150‑1 (MQ=255) tCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGc < 2:775805/150‑1 (MQ=255) tAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCAc > 1:1468621/1‑150 (MQ=255) tAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCAc > 1:1584981/1‑150 (MQ=255) cctccGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTcc < 1:1160780/150‑1 (MQ=255) tccGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAg > 2:649871/1‑150 (MQ=255) cccGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTAATAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAg < 2:562423/149‑1 (MQ=255) ccGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGAGCAAGCGCTG‑TTTTTTTTCTGGACAAGAATATGAATACGTAATTACTCCTTGCGGCACTTTCCAGt > 2:339189/1‑150 (MQ=255) cGTCAACGTGACTCAGGTTGTCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTc < 1:542844/150‑1 (MQ=255) gTCCACGTGACTCAGGGTGGCTTTGGTAACAACGCGACCGCTCATCATGACTAATACATCATTTTTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCa < 2:142059/150‑1 (MQ=255) tccaCGGGACTCAGGTTGGCTTTGGTAACAACGCTACCGCTCATCAGTAATAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAg < 2:1113439/147‑1 (MQ=255) tCAAAGTGACTCAGGTTGGATTTGGTAACAACGCGTCCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAg < 2:938391/150‑1 (MQ=255) gACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCt < 2:511758/150‑1 (MQ=255) aCTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCtt > 1:1488949/1‑150 (MQ=255) aGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAAt > 2:254975/1‑150 (MQ=255) ggTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGGTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATa > 2:1168044/1‑150 (MQ=255) gCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGAcc < 1:310719/150‑1 (MQ=255) cTTTGGTAACAACGCGACCGCTCATCAGTAGTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGAccc > 1:720948/1‑150 (MQ=255) cTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGAccc > 1:1030762/1‑150 (MQ=255) cTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGAccc > 1:1708468/1‑150 (MQ=255) ttGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAg < 2:1754682/150‑1 (MQ=255) gTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCa > 1:1356115/1‑150 (MQ=255) gTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCaa > 1:967106/1‑150 (MQ=255) aacaacGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAgg < 1:709457/150‑1 (MQ=255) caacGCTACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACCGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAcggg > 2:695787/1‑150 (MQ=255) cgcgACCGCTCATCATTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGAtg < 2:1013127/150‑1 (MQ=255) cgcgACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGAtg < 2:1020594/150‑1 (MQ=255) cgACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGAtgtg < 1:1785677/150‑1 (MQ=255) cgACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGAtgtg < 1:1073670/150‑1 (MQ=255) ccGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACGTTCCAGTCAGATAACCTTTACTACGACCCAGCAAGGGGATGTGtat > 2:278347/1‑150 (MQ=255) gCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATAc > 2:477282/1‑150 (MQ=255) ggaatcaCTACGAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATAcc < 2:1044883/147‑1 (MQ=255) catcaGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCATAAAACATTTAATACGACCCAGCAAGGGGATGTGTATACCat > 1:107939/1‑150 (MQ=255) aGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCattatt > 1:642926/1‑150 (MQ=255) tAATACATCATTTGTATTACAGAAACAGTGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGa < 1:1143400/150‑1 (MQ=255) aTACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAg < 1:1298061/150‑1 (MQ=255) catcatTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGCCCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCa > 2:1286438/1‑150 (MQ=255) catcatTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCa > 1:486427/1‑150 (MQ=255) catcatTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCa > 2:155321/1‑150 (MQ=255) catTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCActc < 1:229214/150‑1 (MQ=255) tttGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCtt < 2:967106/150‑1 (MQ=255) tttGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCtt > 1:118879/1‑150 (MQ=255) tGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTAc > 1:452764/1‑150 (MQ=255) tGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGAACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTAc > 1:292682/1‑150 (MQ=255) gaaaaaaaaCAGGGCTTGCGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTTTTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCaa > 1:746620/7‑150 (MQ=255) aCAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGTATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATc < 2:720948/150‑1 (MQ=255) aCAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTGGCTGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGCTGTGGATACCATTATTCCTGAAGTCACTCTTACTCAAta > 2:1116184/1‑149 (MQ=255) aaaaaCAGGGCTTGCGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGAGTATACCATTATTCCTGAAGTCACTCTTACTCAATCtt > 1:9932/3‑150 (MQ=255) aGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCtt > 2:954590/1‑150 (MQ=255) gAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTg < 2:1433315/150‑1 (MQ=255) aaCAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTGTc < 1:1359183/150‑1 (MQ=255) aaCAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTGTc > 2:123260/1‑150 (MQ=255) aaCAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTGTc > 1:800111/1‑150 (MQ=255) aCAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTGTCt < 2:874788/150‑1 (MQ=255) gggCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTGTCtgtg < 2:546368/150‑1 (MQ=255) gggCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTGTCtgtg < 1:892825/150‑1 (MQ=255) ggCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTGTCTGTGc > 1:928571/1‑150 (MQ=255) ggCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTGTCTGTGc < 1:764872/150‑1 (MQ=255) gcgcAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCCGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTGTCTGTGCa < 2:1403000/150‑1 (MQ=255) cgcAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTGTCTGTGCag > 1:636377/1‑150 (MQ=255) gcAAGCCCTG‑TTTTTTTTCGCGCGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCACGTGGTTGTGTATACCATTATTCCTGAAGTCACTCTTACTCAAACTTGTCTGTGCaga < 2:90004/150‑1 (MQ=255) | CGGTTAAACAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTGTCTGTGCAGAG > NC_000913/1104787‑1105081 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |