| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,707,031 | C→A | 6.8% | P38H (CCC→CAC) ‡ | rsxC → | SoxR iron‑sulfur cluster reduction factor component; putative membrane‑associated NADH oxidoreductase of electron transport complex |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,707,031 | 0 | C | A | 6.8% | 264.1 / 7.8 | 89 | P38H (CCC→CAC) ‡ | rsxC | SoxR iron‑sulfur cluster reduction factor component; putative membrane‑associated NADH oxidoreductase of electron transport complex |
| Reads supporting (aligned to +/- strand): ref base C (35/47); new base A (3/3); total (39/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.37e-01 | |||||||||||
ACACCATTCCCGTGCGTATCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAG‑AAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGCCTGTTCACGCGCCCACCTCGGGT > NC_000913/1706883‑1707179 | acacCATTCCCGTGCGTATCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAG‑AAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTAccc > 2:98224/1‑150 (MQ=255) cacCATTCCCGTGCGTATCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAG‑AAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTAcccc < 1:490310/150‑1 (MQ=255) cacCATTCCCGTGCGTATCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAG‑AAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTAcccc > 1:1436308/1‑150 (MQ=255) ccATTCCCGTGCGTATCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAG‑AAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTg > 2:218955/1‑150 (MQ=255) ccATTCCCGTGCGTATCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAG‑AAAAAATAAAATCTGGGATTTCAACGGCCGCATCCATCCACCGGAGATGAAAACACAGTCCAACGGTACACCCCTCCGCCAGGTACCCCTg > 1:90589/1‑150 (MQ=255) cATTCCCGTGCGTATCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAG‑AAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCCCCCGGTTCCCCggg > 1:1751042/1‑150 (MQ=255) aTTCCCGTGCGTATCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAG‑AAAAAATAAAATCTGGGATTGCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGgc < 1:527167/150‑1 (MQ=255) cccGTGCGTATCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAG‑AAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCa > 2:636207/1‑150 (MQ=255) cccGTGCGTATCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAG‑AAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGGGTACCTGGCGCa < 2:678561/150‑1 (MQ=255) cGTGCGTATCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAG‑AAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGc < 2:416817/150‑1 (MQ=255) gTGCGTATCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAG‑AAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGGGTACCTGGCGCAggg < 1:707777/150‑3 (MQ=255) gTGCGTATCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAG‑AAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGGGTACCTGGCGCAggg < 1:833558/150‑3 (MQ=255) tGCGTATCATTCCCGGGGAACACCATGCTTAAGTTATTCTCTGCATTCAG‑AAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGt < 2:192501/150‑1 (MQ=255) gCGTATCCTTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAG‑AAAAAATAAAATCGGCGATTTCTACGGCGGCAGCCATGCTCCGGAGATGAAACCCCAGTCCATCGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGtt < 1:49948/150‑1 (MQ=255) cGTATCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAG‑AAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGttt < 2:1692877/150‑1 (MQ=255) tATCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAG‑AAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTg < 2:1486667/150‑1 (MQ=255) tATCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAG‑AAAAAATAAAATCTGGGATTTAAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTg < 2:1393265/150‑1 (MQ=255) aTCATTCCCGTGGAACACCATGCTTATGTTATTCTCTGCATTCAG‑AAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGt < 2:1225414/150‑1 (MQ=255) aTCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAG‑AAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCAGCGCCAGGTACCCCTGGCGCAGCGTTTTGt > 1:969058/1‑150 (MQ=255) tCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAG‑AAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGtt < 2:1444769/150‑1 (MQ=255) aTTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAG‑AAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTAt < 1:1626592/150‑1 (MQ=255) aTTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAG‑AAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCATGGCGGAGCGTGTTGTTAt > 2:159610/1‑150 (MQ=255) ttCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAG‑AAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTAtt > 2:21128/1‑150 (MQ=255) ccGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAG‑AAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTccc > 1:1217559/1‑149 (MQ=255) gTGGAACACCATGCTTAAGTTATTCTCTGCATTCAG‑AAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACt < 1:1194332/150‑1 (MQ=255) ggAACACCATGCTTAAGTTATTCTCTGCATTCAG‑AAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGa > 2:1264525/1‑150 (MQ=255) ggAACACCATGCTTAAGTTATTCTCTGCATTCAG‑AAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCACCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGa > 1:412812/1‑150 (MQ=255) taaCACCATTCTTAAGTTATTCTCTGCATTCAG‑AAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACTGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGaa < 2:1453222/149‑1 (MQ=255) gAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAAATAAAATCTGTGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGa < 2:874761/150‑1 (MQ=255) ccATGCTTAAGTTATTCTCTGCATTCAG‑AAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGc > 2:1572166/1‑150 (MQ=255) cATGCTTAAGTTATTCTCTGCATTCAG‑AAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCa > 1:1070747/1‑150 (MQ=255) tAAGTTATTCTCTGCATTCAG‑AAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTgg > 2:37619/1‑150 (MQ=255) tAAGTTATTCTCTGCATTCAG‑AAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTGTTGTTATTCCACTGAAACAGCATATTgg > 1:469417/1‑150 (MQ=255) aGTTATTCTCTGCATTCAG‑AAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGgcg < 1:378763/150‑1 (MQ=255) gTTATTCTCTGCATTCAG‑AAAAAATAAAATCTGGGATTTCAACGGCGGCTTCCATCCACCGGAGATGAACCCCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGGTTTGTTATTCCACTGAAACAGCATATTGgcgc < 2:78776/150‑1 (MQ=255) tATTCTCTGCATTCAG‑AAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTg < 1:98224/150‑1 (MQ=255) ctctGCATTCAG‑AAAAAATAAAATCTGGGATTTCAACGGTGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAgg < 1:1072706/150‑1 (MQ=255) tGCATTCAG‑AAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGa < 1:568720/150‑1 (MQ=255) gCATTCAG‑AAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAg < 2:1219022/150‑1 (MQ=255) gCATTCAG‑AAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAg < 1:869155/150‑1 (MQ=255) aTTCAG‑AAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTACAACGGAACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTAATTCCACAGAAACAGCATATTGGCGCTGAAGGTGAGtt > 1:953177/1‑150 (MQ=255) ttCAG‑AAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTCGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTtg > 1:1162926/1‑150 (MQ=255) caaaaaaTAAACTCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCg < 2:705605/149‑1 (MQ=255) aaaataaaatCTGTGATTTCAACTGCGGCATACATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTa < 2:1780893/150‑1 (MQ=255) aaataaaatCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAg < 1:1074827/150‑1 (MQ=255) aaaatCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGACCAACGGTACACCCCTGCGCCACGTACCCCTGGCGCACCGTGATCTTATTACACTGAAACAGCATATTGGCCCAGAAGGTCAGTTGTGCGTTAGAGta > 1:1819509/1‑149 (MQ=255) aaatCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAACCCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCAGTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGGGTTTGCGTCg > 1:1580672/1‑150 (MQ=255) atCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGc < 1:1473093/150‑1 (MQ=255) atCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGc < 1:1777782/150‑1 (MQ=255) tGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGAACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGAGTTAGCGTCGGCGAt > 2:217969/1‑150 (MQ=255) tttCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGGTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGt > 1:1768595/1‑150 (MQ=255) cAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGGTTTGTTTTTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTTTGCGTTTGCGTCGGCGATAAAGTAtt > 2:1248019/1‑150 (MQ=255) gcggcATCCCTCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGcgcg < 2:90589/150‑1 (MQ=255) cggcATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCGGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGAAAAAGGATTGCGCgg > 2:1568559/1‑150 (MQ=255) catccaCCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCCGGGGCGCCGGGCGCCGCGTTTTGGTATTCCCCTGCAACAGCAGAGTGGGGGTGCAGGGGGGTTGGGGGTTGGCGGGGGGGGTCAAGGTTTGGGCGGCccgccg > 2:787736/1‑150 (MQ=255) tccaCCTGAGATGAAAACCCAGTCCAACGGTCCACCCCTGCGCCACGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTTTTGCGCGGCCAGCCGCt < 2:1579033/150‑1 (MQ=255) cGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTAccc < 2:1441133/150‑1 (MQ=255) ggAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCg < 1:1368008/150‑1 (MQ=255) agaTGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTg < 2:950754/150‑1 (MQ=255) aTGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGt < 2:1288466/150‑1 (MQ=255) tGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGGTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTTCGTTAGCGTCGGCGATAAAGTATTTCGCGGCCAGCCGCTTACCCGTGGTc > 1:855709/1‑150 (MQ=255) tGAAAACCCAGTCCAACGGTACACCCCTGCCCCCGGTACCCCTGGCGCCGCGGTTTTTTATTGCCCTGAAACAGCATAATGGCGCTGAAGGTGAGTTGTGCGTTTTCGTCCGCGATAAAGTATTTCGCGGCCACCCGCTTTCCCGTGGta > 2:1370329/1‑149 (MQ=255) aaaCCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTcgcg < 1:31223/150‑1 (MQ=255) atcccAGTCCAACGGTACACCCCTGCGCCAGGGACCCCTGTCGCAGCGTTTTGTTATTCAACTGAAACAGCATATTGGCGCTGATGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCgg < 2:469417/148‑1 (MQ=255) aCCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGc < 1:583721/150‑1 (MQ=255) aCCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTGTTGTTTTTCCACTGAAACAGCATATTGGCGCTGAAGGGGAGTTGTGCGTTAGCGTCGGCGATAAAGTCTTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGc < 1:1366039/150‑1 (MQ=255) aCCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGGTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGGCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGc < 1:1358553/150‑1 (MQ=255) cccAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCa > 1:1453992/1‑150 (MQ=255) cccAGTCCAACGGTACACCCCTGCGCCAGGTACCCCAGGCGCAGCGTTTTGTTATTCCACAGAAACAGCATATTGGCGCAGAAGGTGAGTTGTGCGTTTGCGTCGGCGATAAAGTATTTCGCGGCCAACCGCTTACCCCTGGTCCCGGCa > 2:546173/1‑150 (MQ=255) cAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCaaa < 1:1453195/150‑1 (MQ=255) gTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAAt < 1:1284329/150‑1 (MQ=255) tCCACCGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGGTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGGGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAAtg < 2:1751042/150‑1 (MQ=255) tCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTTGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTTAGCGGCCACCCGCTTACCCGTGGTCGCCGCAAAAtg > 2:1314382/1‑150 (MQ=255) cAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAAtgct > 2:1210753/1‑150 (MQ=255) aCGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAAtgctgc < 1:1264525/150‑1 (MQ=255) cGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGcc < 2:1572324/150‑1 (MQ=255) cGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGcc < 1:1572166/150‑1 (MQ=255) cGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCCTCGGCGATAAACTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGcc > 2:1688272/1‑150 (MQ=255) gTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGGTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGCCTg < 2:977029/150‑1 (MQ=255) acCCCTGCGCCAGGTCCCCCTGGCGCAGCGTGTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGCCTGTTCa < 1:315481/150‑1 (MQ=255) ccccTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGCCTGTTCAc > 1:61181/1‑150 (MQ=255) ccccTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACACGTGGTCGCGGCAAAAAGCTGCCTGTTCAc > 2:810565/1‑150 (MQ=255) ccccTGCGCCAGGTACCCCTGGCGCAGCGGTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGGGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGCCTGTTCAc < 1:1272771/150‑1 (MQ=255) acgcTGCGCCAGGGGTACCTGGCGCAGGGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAAAGCTGCCTGTTCAc > 1:1764769/4‑150 (MQ=255) ccTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGCCTGTTCAcgc > 2:709420/1‑150 (MQ=255) cTGCGCCAGGGGTACCTGGCGCAGCGGTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCCGCCGCTTACCCGTGGTCGCGGCAAAATGCTGCCTGTTCAcgcg > 2:1415716/1‑150 (MQ=255) tGCGCCAGGGGTACCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGCCTGTTCACgcgc > 2:930995/1‑150 (MQ=255) gcgcCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGCCTGTTCACGCGcc < 1:1825898/150‑1 (MQ=255) ccAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGCCTGTTCACGCGCCCAc > 1:697410/1‑150 (MQ=255) gTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGCCTGTTCACGCGCCCACCTCg > 1:288462/1‑150 (MQ=255) gTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGCCTGTTCACGCGCCCACCTCg > 1:813604/1‑150 (MQ=255) tACCCCTGGCGCAGCGGTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCTGCAAAATGCTGCCTGTTCACGCGCCCACCTCgg < 1:1617541/150‑1 (MQ=255) ccccTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGCCTGTTCACGCGCCCACCTCGGGt > 1:1637506/1‑150 (MQ=255) ccccTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGCCTGTTCACGCGCCCACATCGGGt > 1:187504/1‑150 (MQ=255) | ACACCATTCCCGTGCGTATCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAG‑AAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGCCTGTTCACGCGCCCACCTCGGGT > NC_000913/1706883‑1707179 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |