| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,918,017 | C→T | 5.8% | intergenic (+204/+28) | barA → / ← gudD | hybrid sensory histidine kinase, in two‑component regulatory system with UvrY/D‑glucarate dehydratase 1 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,918,017 | 0 | C | T | 5.8% | 371.6 / 7.9 | 120 | intergenic (+204/+28) | barA/gudD | hybrid sensory histidine kinase, in two‑component regulatory system with UvrY/D‑glucarate dehydratase 1 |
| Reads supporting (aligned to +/- strand): ref base C (62/51); new base T (2/5); total (64/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.49e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.98e-01 | |||||||||||
Only 100 of 122 total aligned reads displayed.
GACAAAGTGCCTGTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAACCAATTAAATTCAATGAA‑TTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGCCCGTGTTTCTGATACAGCTCATGGGCTTTCATC > NC_000913/2917868‑2918165 | gACAAAGTGCCTGTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAACCAATTAAATTCAATGAA‑TTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTcc < 2:458619/150‑1 (MQ=255) cAAAGTGCCTGTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAACCAATTAAATTCAATGAA‑TTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAg > 1:1018917/1‑150 (MQ=255) cTGTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAACCAATTAAATTCAATGAA‑TTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGcc < 2:1492978/150‑1 (MQ=255) tgtTTATGCAGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAACCAATTAAATTCAATGAA‑TTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCTATCTGGAGCCggt < 1:1125865/150‑1 (MQ=38) ttgtaggCCGGATAAGGCGTTAACGCCGCATCCGGCCTACAAAACCAATTAAATTCAATGAA‑TTAAAAAATGATGTAGACCTGATACATAGCACACCAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCggtt > 2:121230/7‑150 (MQ=39) gtTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAACCAATTAAATTCAATGAA‑TTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCggtt > 2:587266/1‑150 (MQ=255) ttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAACCAATTAAATTCAATGAA‑TTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCTATCTGGAGCCggtttg < 2:1781656/150‑2 (MQ=255) ttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAACCAATTAAATTCAATGAA‑TTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCTATCTGGAGCCggtttg < 1:230647/150‑2 (MQ=255) tATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAACCAATTAAATTCAATGAA‑TTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCggttttg < 1:802703/150‑1 (MQ=255) tATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAACCAATTAAATTCAATGAA‑TTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCggatttg > 2:1663242/1‑150 (MQ=255) aTGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAACCAATTAAATTCAATGAA‑TTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCTATCTGGAGCCggtttgag < 2:1492587/150‑4 (MQ=38) tccGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAACCAATTAAATTCAATGAA‑TTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCTATCTGCAGCCggtttgagac < 1:1686080/149‑6 (MQ=38) gCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAACCAATTAAATTCAAGGAA‑TTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCggttttggtt > 1:450374/1‑150 (MQ=255) gCCGGATAAGGCGTTAACGCCGCATCCGGCCTACAAAACCAATTAAATTCAATGAA‑TTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCggttttggtt > 1:428547/1‑150 (MQ=255) ggataaggcgTTAACGCCGCATCCGGCCTACAAAACCAATTAAATTCAATGAA‑TTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGCGCCGGTTTTGGTTTTc > 1:366452/7‑150 (MQ=255) gATGCGGAGTTAACGCCTTATCCGGCCTACAAAAACAATTAAATTCAATGAATTTAAAAAATGATTTAGACCTGATACATAGGACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTc < 2:1539607/150‑1 (MQ=38) aTGCGGCGTTAACGCCTTATCCGGCCTACAAAACCAATTAAATTCAATGAA‑TTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTg < 1:1717997/150‑1 (MQ=255) aTGCGGCGTTAACGCCTTATCCGGCCTACAAAACCAATTAAATTCAATGAA‑TTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTg > 2:1406001/1‑150 (MQ=255) aTGCGGCGTTAACGCCTTATCCGGCCTACAAAACCAATTAAATTCAATGAA‑TTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTg < 1:746967/150‑1 (MQ=255) gcggcgTTAACGCCTTATCCGGCCTACAAAACCAATTAAATTCAATGAA‑TTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTc < 2:176055/150‑1 (MQ=255) cggcgTTAACGCCTTATCCGGCCTACAAAACCAATTAAATTCAATGAA‑TTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCt > 2:962261/1‑150 (MQ=255) gcgTTAACGCCTTATCCGGCCTACAAAACCAATTAAATTCAATGAA‑TTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTa > 2:1622191/1‑150 (MQ=255) ttAACGCCTTATCCGGCCTACAAAACCAATTAAATTCAATGAA‑TTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACg > 2:1733755/1‑150 (MQ=255) aaCGCCTTATCCGGCCTACAAACCCAATTAAATTCAATGAA‑TTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCa > 2:1143581/1‑150 (MQ=255) aaCGCCTTATCCGGCCTACAAAACCAATTAAATTCAATGAA‑TTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCa < 1:901398/150‑1 (MQ=255) cTTATCCGGCCTACAAAACCAATTAAATTCAATGAA‑TTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATg < 2:1398068/150‑1 (MQ=255) cTTATCCGGCCTACAAAACCAATTAAATTCAATGAA‑TTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATg < 1:1326738/150‑1 (MQ=255) ttATCCGGCCTACAAAACCAATTAAATTCAATGAA‑TTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTATCTGTCTTAACGCACCAtcc > 2:866339/1‑148 (MQ=255) tATCCGGCCTACAAAACCAATTAAATTCAATGAA‑TTAAAAAATGATGTAGACCTGATACATAACACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGATCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCa > 2:543591/1‑150 (MQ=255) ccGGCCTACAAAACCAATTAAATTCAATGAA‑TTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACgg > 2:1476940/1‑150 (MQ=255) ccGGCCTACAAAACCAATTAAATTCAATGAA‑TTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACgg < 1:1263876/150‑1 (MQ=255) ccTACAAAACCAATTAAATTCAATGAA‑TTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGgcgc > 2:794828/1‑150 (MQ=255) cTACAAAACCAATTAAATTCAATGAA‑TTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCt > 1:764250/1‑150 (MQ=255) tACAAAACCAATTAAATTCAATGAA‑TTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACAATGCACGGGCGCtt > 2:78147/1‑150 (MQ=255) tACAAAACCAATTAAATTCAATGAA‑TTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGCCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATTCACGGGCGCtt > 2:1323562/1‑150 (MQ=255) aCAAAACCAATTAAATTCAATGAA‑TTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTg < 1:587266/150‑1 (MQ=255) aCAAAACCAATTAAATTCAATGAA‑TTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTg < 1:1492480/150‑1 (MQ=255) aCAAAACCAATTAAATTCAATGAA‑TTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTg < 2:635113/150‑1 (MQ=255) aCAAAAACAATTAAATTCACTGAA‑TTAAAAAATGATGTAGACCGCCTACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTg < 2:1154745/150‑1 (MQ=255) aaaaCCAATTAAATTCAATGAA‑TTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTGtt > 2:1398798/1‑150 (MQ=255) aaaCCAATTAAATTCAATTAA‑TTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGGCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTGTTa < 2:248991/150‑1 (MQ=255) aaaCCAATTAAATTCAATGAA‑TTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTGTTa < 1:625681/150‑1 (MQ=255) aaCCAATTAAATTCAATGAA‑TTAAAAAATGATGTAGACCTGTTACATAGCACAACAGGATATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCTGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCTCGGGCGCTTGTTAt < 1:826095/150‑1 (MQ=255) aaTTAAATTCAATGAA‑TTAAAAAATGATGTAGCCCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGAGAGAGCCGGTTTTGGTTGTCTGTCTTAACGCACCATGCACGGGCGCTTGTTAGCGac > 2:709984/1‑149 (MQ=255) aaaTTCAATGAA‑TTAAAAAATGATGTAGACCTGATACATAGCACAACACGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTGTTATCGAACGTc < 1:47906/150‑1 (MQ=255) ttCAATGAA‑TTAAAAAATGATGTAGCCCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTGTTATCGAACGTccag > 1:1137850/1‑150 (MQ=255) ttCAATGAA‑TTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGATCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTAGTTATCCAACGTccac > 2:1345519/1‑149 (MQ=255) ttCAATGAA‑TTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTGTTATCGAACGTccag < 1:440556/150‑1 (MQ=255) cAATGAA‑TTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTGTTATCGAACGTccagcc > 1:682670/1‑150 (MQ=255) aaTGAA‑TTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTGTTATCGAACGTccagcca > 2:805058/1‑150 (MQ=255) aTGAA‑TTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTGTTATCGAACGTccagccag < 1:1114697/150‑1 (MQ=255) tGAA‑TTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTATTAACGAACCATGCACGGGCGATTGTTATGGAACGTCCAGCCAgg > 1:239069/1‑150 (MQ=255) aa‑TTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGAGAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTGTTATCGAACGTCCAGCCAGGaa > 1:659180/1‑150 (MQ=255) ttAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCATGTTATCGAACGTCCAGCCAGGAATc > 1:1449994/1‑150 (MQ=255) ttAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGGTTTGGTTTTCTGGCTTAACGCACCATGCACGTCGGCTGGTTATCGAACGTCAAGCAAGTAATc > 2:275071/1‑150 (MQ=255) aaaaaTGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTGTTATCGAACGTCCAGCCAGGAATCAGa < 1:962261/150‑1 (MQ=255) aaaaaTGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTGTTATCGAACGTCCAGCCAGGAATCAGa > 2:467925/1‑150 (MQ=255) aaaaTGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCCCTTGTTATCGAACGTCCAGCCATGAATCAGAt > 1:1151236/1‑150 (MQ=255) atgatgTAGACCTGATACATCGCTCAACCGGCTATTTTGCGTTTAGCATGAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTGTTATCGAACGTCCAGCCAGGAATCAGATACt < 2:1218341/150‑1 (MQ=255) atgatgTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTAATAACGCACCAAGAACGGGCGCATGTTATCCAAAGACAAGACAGGAATCATATTCt > 1:1618157/1‑150 (MQ=255) gatgTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGc < 1:1368309/150‑1 (MQ=255) gatgTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGc < 2:28858/150‑1 (MQ=255) tAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGCGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTc > 1:980085/1‑150 (MQ=255) aGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATTGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTcc > 2:586963/1‑150 (MQ=255) aGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTcc > 2:1484036/1‑150 (MQ=255) aCCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATCGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCca < 1:51476/150‑1 (MQ=255) aCCTGATACATAGCACAAAAGGATATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCca < 2:59268/150‑1 (MQ=255) cTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCcatc > 1:474909/1‑150 (MQ=255) gATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCcatcgc < 2:1673627/150‑1 (MQ=255) tAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGCTAGAGCCGGTTTTGGTTTTCTGTCTTAACACACCATGCACGGGCGCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTc > 1:733122/1‑150 (MQ=255) gCACAACAGGCTATTTTGCGTTTAGCATCAGACTCAAACCTGCTCCAGATAGAGCCGGTTTTGGTTATCTGTCTTAACGCACCATGCACGGGCGCTTGTTATCGAACGTCCAGCCAGTAATCAGATACTGCATTCCCATCGCATCGTCAc < 1:283511/150‑1 (MQ=255) acaGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCTCCATGCACGGGCGCTTGTTATCGACCGTCCCGCCAGGCATCAGATACTGCATTCCCATCGCATCGTCAcgcgag > 1:273444/1‑148 (MQ=255) aGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGcc < 2:684265/150‑1 (MQ=255) ggCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCa < 1:1376143/150‑1 (MQ=255) ggCTATTTTGCGTTTAGCATCAGTCACAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCATAACGCACCATGCACGGGCGCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCACAACGCATAGTCACGCGCGCCa > 2:346487/1‑150 (MQ=255) tATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTGTTATCGAACGTCCCGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGc > 2:1562950/1‑150 (MQ=255) aTTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGcc < 1:827605/150‑1 (MQ=255) aTTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGcc < 1:830325/150‑1 (MQ=255) aTTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGcc < 1:1712183/150‑1 (MQ=255) tttGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGCCCg > 2:1229388/1‑150 (MQ=255) tGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGCCCgtg > 2:10913/1‑150 (MQ=255) cGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGCCCGTGtt > 1:378551/1‑150 (MQ=255) ttAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCCCGGGCGCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGCCCGTGTTTCt > 2:984049/1‑150 (MQ=255) tAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGGTTTGGTTTTGTGTCTTAACGCACCATGCACGGGCGCGTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCACATCGCAGCGTCCCGCGCGCCAAGCCCGTGTTTCTg > 1:1439468/1‑150 (MQ=255) gCATCAGTCTCAAAGCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGCCCGTGTTTCTGAt < 2:246345/150‑1 (MQ=255) gCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGCCCGTGTTTCTGAt < 2:764250/150‑1 (MQ=255) gCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGCCCGTGTTTCTGAt < 1:382043/150‑1 (MQ=255) aaccaaaaCTGGCTCTATCTGGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGCCCGTGTTTCTGATACAGCt > 2:964072/6‑150 (MQ=255) ctcAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGCCCGTGTTTCTGATACAGCTCa > 1:158664/1‑150 (MQ=255) ctcAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTGTTATCGAAAGTCCAGCCAGGAATCAGATACTGCAATACCAGCGCATCGTCACGCGCGCCAAGGCCGTGGTTCTGATACAGCtaa > 1:1355555/1‑148 (MQ=255) tcAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTGTTATCGAACGTCCAGCCAGGAATCATATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGCCCGTGTTTCTGATACAGCTCAt < 1:76044/150‑1 (MQ=255) tcAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGCCCGTGTTTCTGATACAGCTCAt > 2:575219/1‑150 (MQ=255) cAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCATGCCCGTGTTTCTGATACAGCTCagg > 2:69630/1‑148 (MQ=255) aaaCCGGCTCTATCTGGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTGTTATCGAACGTCCAGCCAGGAATCAGCTACTGCATTCCCATCGCATCGTCACGCGCGCCAAGCCCGAGTTTCTGATACAGCTCATgg > 2:91807/1‑150 (MQ=255) aaaCCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGCCCGTGTTTCTGATACAGCTCATgg < 2:450374/150‑1 (MQ=255) aaCCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTGTTTTCGAACGTCCCGCCAGGAATCAGATACTGCAGTCCCATCGCATCGTCACGCGCGCCAAGCCCGTGTTTCTGATACAGCTCATggg > 1:999280/1‑150 (MQ=255) aaCCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGCCCGTGTTTCTGATACAGCTCATggg > 2:448248/1‑150 (MQ=255) aCCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGAACGGGCGCTTGTTATCGAACGTCCAGCCAGGAATCAGCGACTGCATTCCCATCGCATCGTCACGCGCGCCAAGCCCGTGTTTCTGATACAGCTCATGGGc > 2:1720613/1‑150 (MQ=255) cTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCCCCATGCACGGGCGCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGCCCGTGTTTCTGATACAGCTCATGGGCTTtca < 1:1233524/150‑1 (MQ=255) cTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGCCCGTGTTTCTGATACAGCTCATGGGCTTtca < 1:630602/150‑1 (MQ=255) | GACAAAGTGCCTGTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAACCAATTAAATTCAATGAA‑TTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGCGCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGCCCGTGTTTCTGATACAGCTCATGGGCTTTCATC > NC_000913/2917868‑2918165 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |