| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,233,710 | C→T | 5.9% | intergenic (+27/+18) | fadH → / ← higA | 2,4‑dienoyl‑CoA reductase, NADH and FMN‑linked/antitoxinof the HigB‑HigA toxin‑antitoxin system |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,233,710 | 0 | C | T | 5.9% | 249.3 / 3.1 | 89 | intergenic (+27/+18) | fadH/higA | 2,4‑dienoyl‑CoA reductase, NADH and FMN‑linked/antitoxinof the HigB‑HigA toxin‑antitoxin system |
| Reads supporting (aligned to +/- strand): ref base C (50/30); new base T (2/3); total (53/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.72e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.64e-01 | |||||||||||
CTGGCGCAACCGCTGATTGATAGCGGGAAAACGGTGCATTTAATTGGCGGCTGCGATGTGGCTATGGAGCTGGACGCACGACGGGCAATTGCCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTGACACCATAGATTTACTGCCAATTTCCGGCAGATCGGA > NC_000913/3233561‑3233859 | cTGGCGCAACCGCTGATTGATAGCGGGAAAACGGTGCATTTAATTGGCGGCTGCGATGTGGCTATGGAGCTGGACGCACGACGGGCAATTGCCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAAc < 2:72827/150‑1 (MQ=255) cAACCGCTGATTGATAGCGGGAAAACGGTGCATTTAATTGGCGGCTGCGATGTGGCTATGGAGCTGGACGCACGCCGGGCAATTGCCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCGTTATTTGACGCGCCGGATGCAACGCATcc > 2:1621333/1‑150 (MQ=255) cAACCGCTGATTGATAGCGGGAAAACGGTGCATTTAATTGGCGGCTGCGATGTGGCTATGGAGCTGGACGCACGACGGGCAATTGCCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACGCATcc < 1:1323858/150‑1 (MQ=255) ccGCTGATTGATAGCGGGAAAACGGTGCATTTAATTGGCGGCTGCGATGTGGCTATGGAGCTGGACGCACGACGGGCAATTGCCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCGTTGCATCCGGc < 2:1318480/150‑1 (MQ=255) ccGCTGATTGATAGCGGGAAAACGGTGCATTTAATTGGCGGCTGCGATGTGGCTATGGAGCTGGACGCACGACGGGCAATTGCCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACGCGTCCGGc > 1:229587/1‑150 (MQ=255) cGCTGATTGATAGCGGGAAAACGGTGCATTTAATTGGCGGCTGCGATGTGGCTATGGAGCTGGACGCACGACGGGCAATTGCCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACGCATCCGGCa < 1:22674/150‑1 (MQ=255) gCTGATTGATAGCGGGAAAACGGTGCATTTAATTGGCGGCTGCGATGTGGCTATGGAGCTGGACGCACGACGGGCATTTGCCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCGTTGCATCCGGcgc < 1:1416215/150‑3 (MQ=255) gCTGATTGATAGCGGGAAAACGGTGCATTTAATTGGCGGCTGCGATGTGGCTATGGAGCTGGACGCACGACGGGCAATTGCCCAGGGACCACGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCACCGCATCCGGCAc > 2:103475/1‑150 (MQ=255) gCTGACTGATAGCCGGAAAACGGTGCATTTAATTGGCGGCGGCGATGTGGCTATGGAGCTGGACGCACGACGGGCAATTGCCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCGTGGCATCCGGcgc < 2:454763/150‑3 (MQ=255) cTGATTGATAGCGGGAAAACGGTGCATTTAATTGGCGGCTGCGATGTGGCTATGGAGCTGGACGCACGACGGGCAATTGCCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCGTTGCATCCGGcgct < 1:62083/150‑4 (MQ=255) tatacggggAAAACGGGGCATTTAATTGGCGGCTGCTATGTGGCTATGGAGCTGGACGCACGACGGGCAATTGCCCTGGGAACACGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACGCATCCGGCACGTCGCGt < 1:972631/144‑1 (MQ=255) gatAGCGGGAAAACGGTGCATTTAATTGGCGGCTGCGATGTGGCTATGGAGCTGGACGCACGACGGGCAATTGCCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACGCATCCGGCACGTCGCGt > 1:1085332/1‑150 (MQ=255) gCGGTAAAACGGGGCATTTAATTGGCGGCTGCGATGTGGCTATGGCGCTGGACGCACGACGGGCAATTGCCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACGCATCCGGCACGTCGCGTTAAt < 1:46814/150‑1 (MQ=255) cGGGAAAACGGTGCATTTAATTGGCGGCTGCGATGTGGCTATGGAGCTGGACGCACGACGGGCAATTGCCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACGCATCCGGCACGTCGCGTTAATc < 2:257517/150‑1 (MQ=255) cGGGAAAACGGTGCATTTAATTGGCGGCTGCGATGTGGCAATGGAGCTGGACGCACGACGGGCAATTGCCGAGGGAACACGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACCCATACGGCACGTCGCGtttaga > 1:1683418/1‑146 (MQ=255) aCGGGGCATTTAATTGGCGGCTGCGATGTGGCTATGGAGCGGGACGCACGACGGGCAATTGCCCAGGTACCACGGCTGCCGCTGGAGATTTAATGCGTTATTTTAAGCGCCGGATGCAAGGCATCGGGCACGTCGCGTTAATCAATAAAc < 2:85871/150‑1 (MQ=255) cGGTGCATTTAATTGGCGGCTGCGCTGTGGCTATGGAGCTGGACGCACGACGGGCAATTGCCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACGCATCCGGCACGTCGCGTTAATCAAGAAACa > 1:113748/1‑150 (MQ=255) cGGTGCATTTAATTGGCGGCTGCGATGTGGCTATGGAGCTGGACGCACGACGGGCAATTGCCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACGCATCCGGCACGTCGCGTTAATCAATAAACa > 1:501524/1‑150 (MQ=255) ggTGCATTTAATTGGCGGCTGCGATGTGGCTATGGAGCTGGACGCACGACGGGCAATTGCCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACGCATCCGGCACGTCGCGTTAATCAATAAACaa > 2:918607/1‑150 (MQ=255) gCATTTAATTGGCGGCTGCGATGTGGCTATGGAGCTGGACGCACGACGGGCAATTGCCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACGCATCCGGCACGTCGCGTTAATCAATAAACAAGGc > 2:602521/1‑150 (MQ=255) cATTTAATTGGCGGCTGCGATGTGGCTATGGAGCTGGACGCACGACGGGCAATTGCCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCg > 2:1230978/1‑150 (MQ=255) tttAATTGGCGGCTCCGATGTGCCAATGTAGCGGGACGCTCGCCGGGCAATTGCCCAGGGAACCCGGCTGCCGCTGGAGATTTAAATCGTTATTTGAAGGGCCGTATGAAAGGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCggg < 2:1261007/150‑1 (MQ=255) ttAATGTGCGGCAGCGACGTGCCTCTCGAGCCGGCCCCACCCCGCGCAATGCCCCAGTTAATATGGCTGGCGCTGCTGATATAAATCTTTATTCCATGCCCCGTATGCACCCCAGCCGGCACTTCGCGTTAATCAATAAACAAGGCGGga < 2:158545/150‑1 (MQ=255) tatttGGGGGCTGCTTTGGGGCTTGGGCGCGGGCCGCACGACGGGAATTTCCCCAGGTACCACGGGGGGCGCTGGCGATTTAAAGCGTTATTTGACGCGCCGGAGGCACCGCATCGGGCACGTCGCGTTAATCAATAAACAAGGCGGgag < 1:1228517/147‑1 (MQ=255) tAATTGGCGGCTGCGATGTGGCTATGGAGCTGGACGCACGACGGGCAATTGCCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGgag > 1:501734/1‑150 (MQ=255) tAATTGGCGGCTGCGATGTGGCTATGGAGCTGGACGCACGACGGGCAATTGCCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGgag > 1:1475016/1‑150 (MQ=255) aaaTTGGCGGCTGCGATGTGGCTATGGAGCTGGACGCACGACGGGCAATTGCCCAGGGAACCCGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGgag < 2:45403/149‑1 (MQ=255) ggcggcTGCGATGTGGCTATGGAGCTGGACGCACGACGGGCAATTGCCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATg > 1:1171492/1‑150 (MQ=255) cGATGTGGCTATGGAGCTGGACGCACGACGGGCAATTGCCCAGGGAACACGGCTGGCGCTGGAGAATTAAATCGTTATTTGAAGCGCCGCATCCAACGCATCCTGCACGTCGCGTTAATCAATAAACAAGGCGGGACAAATGCCGATTcg > 2:142371/1‑150 (MQ=255) tgtgGCTATGGAACTGGACGCACGACGGGCAATTGCCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATcgcgg > 1:697053/1‑149 (MQ=255) ggCTATGGAGCTGGACGCACGACGGGCAATTGCCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACGCATCCGGCACGTCGCGGTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGc > 1:475786/1‑150 (MQ=255) cTATGGAGCTGGACGCACGACGGGCAATTGCCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCa > 1:1072279/1‑150 (MQ=255) tATGGAGCTGGACGCACGACGGGCAATTGCCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCaa < 1:48012/150‑1 (MQ=255) tGGAGCTGGACGCACGACGGGCAATTGCCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGCAATGCCGAATCGCGTTGCCAAtt > 2:1225819/1‑150 (MQ=255) tGGAGCTGGACGCACGACGGGCAATTGCCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAAtt > 1:488750/1‑150 (MQ=255) ggAGCTGGACGCACGACGGGCAATTGCCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAAttt > 1:577555/1‑150 (MQ=255) ggAGCTGGACGCACGACGGGCAATTGCCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACGCATCCGGCACGTCGCGTTAATCAAAAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAAttt > 1:1466657/1‑150 (MQ=255) ggACGCACGACGGGCAATTGCCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGc > 1:86247/1‑150 (MQ=255) ggACGCACGACGGGCAATTGCCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGc > 1:519948/1‑150 (MQ=255) cACGACGGGCAATTGCCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGtt < 1:948513/150‑1 (MQ=255) aggacgGGCATTTCCCCAGGGAACACGCCTTGCGGGGTAGATTTAAATCGTTATTTTAAGCGCCGGATGCAACGCTTCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTc < 2:969173/148‑1 (MQ=255) cgacgGGCAATTGCCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCACCGGATGCAACGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTcc < 2:872871/150‑1 (MQ=255) gacgGGCAATTGCCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCa > 2:498371/1‑150 (MQ=255) cgGGAAATTGCCCTGGCAACCCGGCGGGCGCTGTATATTTAAATCGTTATTTGACGCGCCGGATCCAACCAATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGc < 1:732366/150‑1 (MQ=255) ggCAATTGCCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACGCCTCCGGCACGGCGCGGTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGt > 1:1394506/1‑150 (MQ=255) ggCAATTGCCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTACAGCGt > 1:1139949/1‑150 (MQ=255) aaTTGCCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACGCATCCGGCACGTAGCGGTTATCAATAAACAAGGCGGGGGAAATGGCGAATCGCGTTGCCAATTTTTTTGCTGGTGGCAGCGTTat > 1:1771611/1‑149 (MQ=255) tGCCCAGGTAACACGGCGGCGGCGGTAGATTAAAATCGATATTTGATGCGCGGGATGCACCGCATCGGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAAttt < 2:339774/150‑1 (MQ=255) tGCCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAAttt < 2:1072279/150‑1 (MQ=255) cccAGGGAACACGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTcc > 1:960823/1‑150 (MQ=255) ccAGGGAACACGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATTCAACGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATAGCGTTGCCAATTTTTTATCGTGTTCCAGCGTTAATTTCct > 2:1120122/1‑150 (MQ=255) ccAGGGAACACGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACGCGTCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCct < 2:229587/150‑1 (MQ=255) cAGGGAACACGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACGCATCCGGCCCGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATAGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTGcta > 1:1136617/1‑149 (MQ=255) cAGGGAACACGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCctc > 2:564049/1‑150 (MQ=255) gggAACACGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACGCATCCGGCACGTCGCGTTTATCAATAAACCAGGCGGGAGCAATGCCGCATCGCGTTGCCAATTTTTTAGCGTGTTCAAGCGTTAATTTACTCtt > 1:1372285/1‑150 (MQ=255) ggcaaCACGGCTGGCGCGGTATATTAAAACGTTTTTTTCACGCGCGGTATGCACCGAATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCtt < 1:1707325/147‑1 (MQ=255) cacGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACGCCTACGGAACCTAGCGGTAATCAATAAACAAGGCGGGAGAAATGCCCAATCGCGTTTCCAAATTTTTATGGTGTTCCAGCGTGAATTTCCTCTTccccc > 1:1376028/1‑148 (MQ=255) gggcgggcgGTGGTTATTTAATTGGTTATTTTACGCGCCGTATGCACCGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTc < 1:1699429/149‑1 (MQ=255) ggCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCa > 1:448102/1‑150 (MQ=255) tGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACGCATCCGGTACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGGGTTCCAGCGTTAATTTCCTCTTCCCGCTCaaaa > 2:1264002/1‑150 (MQ=255) cgcTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAAcgc > 1:808744/1‑150 (MQ=255) gcTGGAGATTTAAATCGTTTTTTGAAGCGCCGGATGCAACGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTACCGTGTTCAAGCCTTAATTTCCTCTTCCCGCTCAAAActcg > 2:1001155/1‑150 (MQ=255) gcTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGGTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAAcgcg > 1:1065414/1‑150 (MQ=255) gtgtagaTTTAATGCTTTATTTGAAGCGCGGGTGTGACCCCTTCGGGCACGTCGCGTTATTCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGt < 2:148395/146‑1 (MQ=255) cTGGAGATTTAAATCGTTATTTGAAGCGCCGGATTCAAAGCATCCGGCACGTCTCGTTAATCAATAAACAATGCGGTAGAAATGACAAAAATCGTTTAAAATTTTTTATAGTTTTCCAGCTTTAATTTACTCTTCCCGCTAAAAAAGCGt > 1:408965/1‑150 (MQ=255) cTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGt > 2:1205741/1‑150 (MQ=255) tGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTg < 1:39049/150‑1 (MQ=255) tGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTg < 2:1171492/150‑1 (MQ=255) ggAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACGCATCCGGCACGTCGCGTTAATCAATAAAAAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTGa > 2:1261986/1‑150 (MQ=255) ttAAATCGTTATTTGAAGCGCCGGATGCAACGCATCCGGCAAGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTGACACCAt > 1:1546380/1‑150 (MQ=255) taatgctttATTTGACGCGCCGTTTCCACCGCTGCGGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTGACACCATa < 2:1395576/143‑1 (MQ=255) tAAATCGTTATTTGAAGCGCCGGATGCAACGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAAAGCGTGACACCATa > 2:855623/1‑150 (MQ=255) aTTTGACGCGCCGGATCCAACGCATCCGGCACGTCGCGTTAATCAATCAACAAGGCGGTAGAAATGCCGAATCGCGTTGCCAATTTATTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGGGACACCATAGATTTACTg < 2:113748/150‑1 (MQ=255) aTTTGAAGCGCCGGATGCAACGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTGACACCATAGATTTACTg > 2:1083351/1‑150 (MQ=255) tttGAAGCGCCGGATGCAACGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTGACACCATAGATTTACTGc < 2:129995/150‑1 (MQ=255) tGAAGCGCCGGATGCAACGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTACTCTTACCGCTCAAAACGCGTGACACCATAGATTTACTGCCa > 2:659871/1‑150 (MQ=255) tacgcgcCGTATCCAACGCATCGGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTGACACCATAGATTTACTGCCaa < 2:730534/147‑1 (MQ=255) gAAGCGCCGGATGCAACGCATCCGGCACGTCGCGGTAATCAATAAACAAGGCGGGCGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAACCGCGTGACACCATAGATTTACTGCCaa < 2:296177/150‑1 (MQ=255) cgtgcCGGATGCGTTGCATCCGGCGCGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTAGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTGACACCATAGATTTACTGCCAAtt > 1:1737573/4‑150 (MQ=255) aGCGCCGGATGCAACGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTGACACCATAGATTTACTGCCAAtt > 2:692359/1‑150 (MQ=255) gcCGGATGCGTTGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTGACACCATAGATTTACTGCCAATTTcc > 1:697678/1‑150 (MQ=255) gcCGGATGCAACGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTGACACCATAGATTTACTGCCAATTTcc > 1:1761457/1‑150 (MQ=255) ccGGATGCAACGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTGACACCATAGATTTACTGCCAATTTCCg > 1:1326887/1‑150 (MQ=255) ggATGCAACGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTGACACCATAGATTTACTGCCAATTTCCGGc < 2:1085538/150‑1 (MQ=255) ggATCCACCGCACCCGGCACGTCGCGTTAATCAATAAACAAGTCCGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTGACACCATAGATTTACTGCCAATATCCGGc < 2:519948/150‑1 (MQ=255) ttcgaaaCTCAGCCGCCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTGACACCATAGATTTACTGCCAATTTCCGGCa < 2:1626273/145‑1 (MQ=255) cAACGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTGACACCATAGATTTACTGCCAATTTCCGGCAGATc > 2:585968/1‑150 (MQ=255) cAACGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTGACACCATAGATTTACTGCCAATTTCCGGCAGATc > 1:1758854/1‑150 (MQ=255) aaCGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTGACACCATAGATTTACTGCCAATTTCCGGCAGATCg < 1:1205741/150‑1 (MQ=255) aaCGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTGACACCATAGATTTACTGCCAATTTCCGGCAGATCg > 1:1458783/1‑150 (MQ=255) cGCATCCGGCACGTCGCGTTAATCAATAATCAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTGTCACCATAGATTTACTGCCAATTTCCGGAAGATAGGa > 2:75832/1‑150 (MQ=255) | CTGGCGCAACCGCTGATTGATAGCGGGAAAACGGTGCATTTAATTGGCGGCTGCGATGTGGCTATGGAGCTGGACGCACGACGGGCAATTGCCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCGTTATTTGAAGCGCCGGATGCAACGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTGACACCATAGATTTACTGCCAATTTCCGGCAGATCGGA > NC_000913/3233561‑3233859 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |