| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,600,988 | T→A | 6.6% | intergenic (‑205/+40) | rpoH ← / ← ftsX | RNA polymerase, sigma 32 (sigma H) factor/putative ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,600,988 | 0 | T | A | 6.6% | 342.1 / 9.8 | 119 | intergenic (‑205/+40) | rpoH/ftsX | RNA polymerase, sigma 32 (sigma H) factor/putative ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base T (53/58); new base A (6/2); total (59/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.63e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.12e-01 | |||||||||||
Only 100 of 121 total aligned reads displayed.
AGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGC > NC_000913/3600839‑3601137 | agagCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCt < 2:1546998/150‑1 (MQ=255) agCAACGAGGTTATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCa < 2:221515/150‑1 (MQ=255) agCAACGAGGTTATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCa < 1:1813457/150‑1 (MQ=255) cAACGAGGTTATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCAtt > 1:1069437/1‑150 (MQ=255) cGAGGTTATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCa < 2:1787621/150‑1 (MQ=255) ggTTATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAggg < 2:1157476/150‑1 (MQ=255) tATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGaaa < 2:919472/150‑1 (MQ=255) tATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGaaa > 2:375832/1‑150 (MQ=255) tATCATTCACTGTTTTATCAGACCGTGATTTTATCCAAAAGTTCTATGCAAGCTTGTGAATTAATTTCGCACAAAATGTGTCATAGAGATG‑A‑ATTACAGGGAATAGACAACGGGGTCGCTTTCCCTGCAATGGGTTCCGTAGCAGGGaaa < 1:346020/150‑1 (MQ=255) aTCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCAATGGGTTCCGTAGCAGGGAAag < 2:1666355/150‑1 (MQ=255) cATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGATTGTGAATAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAagag < 2:895277/150‑1 (MQ=255) cATTCACTGTTTTATCAGACAGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGAAATAGACATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAagag > 1:497458/1‑150 (MQ=255) agtCACTGTTTAATCAGACCCTGATTTTATCCACAAGTTCAATGCAAGCTTCTTAATAAATAACGCACAAAATTTGAAATAGAGATG‑ATTATA‑AGGGAAGCGAAAACGGGGTCTCTTACCATTCTACGGCACCCATTGCAGGGAAagaga > 2:1223171/3‑149 (MQ=255) aTTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCGATTGCAGGGAAAGAGt > 2:1191178/1‑150 (MQ=255) ttCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGta < 1:300849/150‑1 (MQ=255) tCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGtat < 1:1431211/150‑1 (MQ=255) cACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGtata > 2:735987/1‑150 (MQ=255) cACTGTTTTATCAGACCATGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGAA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGtat > 2:1482076/1‑150 (MQ=255) cACTGTTATATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGAGG‑A‑AATACCGGGAAGAGACAACGGTGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGtata > 1:286383/1‑150 (MQ=255) aCTGTTTTATCAGACCGTGATTTTATCCACAAGATCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGATACGGAACACATTGCAGGGAAAGAGTATaa > 2:1191433/1‑150 (MQ=255) tGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAaca < 1:1514814/150‑1 (MQ=255) gTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAacac > 1:1194600/1‑150 (MQ=255) gTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAacac > 2:450736/1‑150 (MQ=255) ttATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCt < 1:947429/150‑1 (MQ=255) aGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTttat > 1:176582/1‑150 (MQ=255) aGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTttat > 2:701504/1‑150 (MQ=255) ccGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGACCCCATTGCAGGGAAAGAGTAAAACCCGCTTTtattat > 2:1362004/1‑150 (MQ=255) ccGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTtattat < 2:1351581/150‑1 (MQ=255) cGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTattatt < 1:973978/150‑1 (MQ=255) gTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTattatta > 1:1295521/1‑149 (MQ=255) gTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTc < 1:1217484/150‑1 (MQ=255) tGATTTTATCCACAAGTTCAATGCAAGTTTGTGAATAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGTGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCa < 2:13547/150‑1 (MQ=255) taTTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAg < 1:728445/149‑1 (MQ=255) aTTTTATCCACAAGTTCAATTCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAgg < 1:519392/150‑1 (MQ=255) aTTTTATACACAAGTTCCATGCAAGCTTGTGAATAAATTACGCACAAAAGGTGACATAGAGATG‑A‑AATACCGTGAAGAGACAACGGGGGCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAgg < 2:1268567/150‑1 (MQ=255) ttATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGt < 2:839179/150‑1 (MQ=255) tATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTa > 2:1026339/1‑150 (MQ=255) tCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTaaa > 2:1287858/1‑150 (MQ=255) ccACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAg > 1:25132/1‑150 (MQ=255) caAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTgg < 1:750792/150‑1 (MQ=255) gTTCAATGCAAGCTTGTGAATAAATTCCGCACAAAATGGGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGt < 2:734788/150‑1 (MQ=255) gTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGt > 1:1099294/1‑150 (MQ=255) gTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGt > 1:1754093/1‑150 (MQ=255) gTTCAATGCAAGCTTGTGAATAAATTACGCACAAAAAGTGACAAAGAGATG‑A‑AATACCGGGAAGACACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTTCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGAAAAGTGGAGt > 1:1423955/1‑150 (MQ=255) ttCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTa < 2:668913/150‑1 (MQ=255) tGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAAtgt > 1:1770781/1‑150 (MQ=255) gCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAAtgtt > 2:786594/1‑150 (MQ=255) cAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAAtgttg < 2:442619/150‑1 (MQ=255) cAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAAtgttg < 2:1069437/150‑1 (MQ=255) cAAGATTGTGAATAAATAACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGTCAACGGGGTCTCTTTCCCTGCTACGGATCCCATTGCAGTGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAATGTGGCGTAAAtgttg < 1:1191433/150‑1 (MQ=255) aaGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAAtgttgt < 1:1183434/150‑1 (MQ=255) aaGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAAtgttgt > 2:802411/1‑150 (MQ=255) ttGTGAACAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTATTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTAAGGCGTAAAGTTTCGTAAATGTTGTACCg > 1:773396/1‑150 (MQ=255) tgAATAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTgg > 2:1619857/1‑150 (MQ=255) tgAATAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTgg < 1:253390/150‑1 (MQ=255) tgAATAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGACACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCATTGAAATAGTAAAACACGCTTTTATTATTCAGGCGGAAAGTGGCGTAAATGTTGTACCGTgg < 2:280389/150‑1 (MQ=255) aaTAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTTCGGAACCCATTGCAGGGAAAGAGTATAACAAGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTTTACCGTGGCa > 1:1623565/1‑150 (MQ=255) ttACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCAc < 1:739841/150‑1 (MQ=255) aCGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGc < 1:600995/150‑1 (MQ=255) cGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCt > 2:1240382/1‑150 (MQ=255) cGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCt > 1:12694/1‑150 (MQ=255) gCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTg < 2:1303780/150‑1 (MQ=255) ccacaAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTg < 2:463936/149‑1 (MQ=255) cacaAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGc > 2:1199078/1‑150 (MQ=255) acaAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGcc < 2:1308100/150‑1 (MQ=255) aaTGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCAccc < 1:360836/150‑1 (MQ=255) tgtgACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAg < 2:135591/150‑1 (MQ=255) gACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGAGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCa > 2:1065384/1‑150 (MQ=255) cATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAat < 1:500180/150‑1 (MQ=255) aTG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAg < 1:1512804/150‑1 (MQ=255) tG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGc > 1:384940/1‑150 (MQ=255) tG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGc > 1:1651745/1‑150 (MQ=255) tG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGc > 1:1374838/1‑150 (MQ=255) tG‑A‑AATACCGGGAAGAGACAAAGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCCAGCCACGCTGCCACCCAGCCAATCATCCAGc > 2:136482/1‑150 (MQ=255) g‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCa < 2:840527/150‑1 (MQ=255) aCCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACca < 1:735987/150‑1 (MQ=255) ccGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACcag > 2:1199300/1‑150 (MQ=255) gggAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACcagca > 2:1485121/1‑150 (MQ=255) gAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCagcagc < 1:1089580/150‑1 (MQ=255) gAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGAATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCagcagc > 1:522089/1‑150 (MQ=255) agagACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCaa < 2:1304712/150‑1 (MQ=255) gagaCAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCATGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGATGCCACCCATCCAATAAGAGAGAATACCAGCAGCAAt > 2:93156/1‑150 (MQ=255) agaCAACGGTGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATa < 2:1736762/150‑1 (MQ=255) aCAACTGGGTCTCTTTCCCTGCTACTGAACCCATTGCAGGGAAAGAGTATAACACGCTTTAATAATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGc < 1:294406/150‑1 (MQ=255) cAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCa < 2:689066/150‑1 (MQ=255) cAACGGGGGCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGGGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCa < 2:1706635/150‑1 (MQ=255) aaCGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAg < 2:204497/150‑1 (MQ=255) tatactctTTCCCTGCAATGGGTTCCGTAGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCAt > 1:1100060/5‑150 (MQ=38) ggTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGTCGTAAAGTTGCGTAAATGTTGTACCGTGGCAAGCCAAGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCAtt < 2:286383/150‑1 (MQ=255) atactctTTCCCTGCAATGGGTTCCGTAGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCAtt > 2:394828/4‑150 (MQ=38) tctcTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCa < 2:885453/150‑1 (MQ=255) ctctTTCCCTGCAATGGGTTCCGTAGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCAt > 2:150487/1‑150 (MQ=39) tctTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCACGCCACGCTGCCACCCAGCCACTCATCGAGCATACCAGCAGCAATAGCAGGCATTCATc > 1:767457/1‑150 (MQ=255) tctTTCCCTGCAATGGGTTCCGTAGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATc > 1:1332484/1‑150 (MQ=39) ctTTCCCTGCAATGGGTTCCGTAGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCg > 2:1508648/1‑150 (MQ=255) tttCCCTGCAATGGGTTCCGTAGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGa > 1:372465/1‑150 (MQ=255) ccTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGa > 2:862323/1‑150 (MQ=255) cTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGAt > 1:1703161/1‑150 (MQ=255) cTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGAt > 1:1092682/1‑150 (MQ=255) tACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGACACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGc > 1:223792/1‑150 (MQ=255) | AGAGCTTAAGAGCAACGAGGTTATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATG‑A‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGC > NC_000913/3600839‑3601137 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |