| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,600,993 | A→G | 6.5% | intergenic (‑210/+35) | rpoH ← / ← ftsX | RNA polymerase, sigma 32 (sigma H) factor/putative ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,600,993 | 0 | A | G | 6.5% | 363.5 / 11.7 | 124 | intergenic (‑210/+35) | rpoH/ftsX | RNA polymerase, sigma 32 (sigma H) factor/putative ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base A (56/59); new base G (6/2); total (63/61) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.73e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.38e-01 | |||||||||||
Only 100 of 127 total aligned reads displayed.
AGCAACGAGGTTATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTG > NC_000913/3600849‑3601142 | agCAACGAGGTTATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCa < 2:221515/150‑1 (MQ=255) cAACGAGGTTATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCAtt > 1:1069437/1‑150 (MQ=255) aaCGAGGTTATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACACACAAAATGTGACATAGAGATGA‑ATTACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTg < 1:297685/150‑1 (MQ=255) ggTTATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAggg < 2:1157476/150‑1 (MQ=255) gTTATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAAACCATTGCAGGGa > 1:1735452/1‑150 (MQ=255) tATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGaaa < 2:919472/150‑1 (MQ=255) aTCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAag < 2:1320772/150‑1 (MQ=255) aTCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCAATGGGTTCCGTAGCAGGGAAag < 2:1666355/150‑1 (MQ=255) agtCACTGTTTAATCAGACCCTGATTTTATCCACAAGTTCAATGCAAGCTTCTTAATAAATAACGCACAAAATTTGAAATAGAGATGATTATA‑AGGGAAGCGAAAACGGGGTCTCTTACCATTCTACGGCACCCATTGCAGGGAAagaga > 2:1223171/3‑149 (MQ=255) aTTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCGATTGCAGGGAAAGAGt > 2:1191178/1‑150 (MQ=255) ttCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGta < 1:300849/150‑1 (MQ=255) cACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGtata > 2:735987/1‑150 (MQ=255) cACTGTTATATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGAGGA‑AATACCGGGAAGAGACAACGGTGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGtata > 1:286383/1‑150 (MQ=255) aCTGTTTTATCAGACCGTGATTTTATCCACAAGATCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGATACGGAACACATTGCAGGGAAAGAGTATaa > 2:1191433/1‑150 (MQ=255) cTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAac > 1:723189/1‑150 (MQ=255) tGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAaca < 1:1514814/150‑1 (MQ=255) gTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAacac > 2:450736/1‑150 (MQ=255) gTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAacac > 1:1194600/1‑150 (MQ=255) tATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCtt > 2:1273546/1‑150 (MQ=255) aGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTttat > 1:176582/1‑150 (MQ=255) aGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTttat > 2:701504/1‑150 (MQ=255) ccGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGACCCCATTGCAGGGAAAGAGTAAAACCCGCTTTtattat > 2:1362004/1‑150 (MQ=255) ccGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTtattat < 2:1351581/150‑1 (MQ=255) cGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTattatt < 1:973978/150‑1 (MQ=255) gTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTc < 1:1217484/150‑1 (MQ=255) taTTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAg < 1:728445/149‑1 (MQ=255) aTTTTATCCACAAGTTCAATTCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAgg < 1:519392/150‑1 (MQ=255) aTTTTATACACAAGTTCCATGCAAGCTTGTGAATAAATTACGCACAAAAGGTGACATAGAGATGA‑AATACCGTGAAGAGACAACGGGGGCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAgg < 2:1268567/150‑1 (MQ=255) tATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTa > 2:1026339/1‑150 (MQ=255) tCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTaaa > 2:1287858/1‑150 (MQ=255) ccACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAg > 1:25132/1‑150 (MQ=255) cacaAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGt > 2:863053/1‑150 (MQ=255) caAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTgg < 1:750792/150‑1 (MQ=255) gTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGt > 1:1754093/1‑150 (MQ=255) gTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGt > 1:1099294/1‑150 (MQ=255) gTTCAATGCAAGCTTGTGAATAAATTACGCACAAAAAGTGACAAAGAGATGA‑AATACCGGGAAGACACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTTCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGAAAAGTGGAGt > 1:1423955/1‑150 (MQ=255) ttCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTa < 2:668913/150‑1 (MQ=255) aTGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGA‑AATACCGGGTAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAAtg < 2:137702/150‑1 (MQ=255) tGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAAtgt > 1:1770781/1‑150 (MQ=255) gCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAAtgtt > 2:786594/1‑150 (MQ=255) gCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAAtgtt < 2:944668/150‑1 (MQ=255) cAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAAtgttg < 2:442619/150‑1 (MQ=255) aaGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAAtgttgt > 2:802411/1‑150 (MQ=255) aaGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAAtgttgt < 1:1183434/150‑1 (MQ=255) ttGTGAACAAATTACGCACAAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTATTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTAAGGCGTAAAGTTTCGTAAATGTTGTACCg > 1:773396/1‑150 (MQ=255) aaTAAATTACGCACAAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTTCGGAACCCATTGCAGGGAAAGAGTATAACAAGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTTTACCGTGGCa > 1:1623565/1‑150 (MQ=255) aCGCACAAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGc < 1:199339/150‑1 (MQ=255) cGCACAAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCt > 1:12694/1‑150 (MQ=255) gCACAAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTg < 2:1303780/150‑1 (MQ=255) ccacaAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTg < 2:463936/149‑1 (MQ=255) cacaAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTTAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGc > 1:763208/1‑150 (MQ=255) cacaAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGc > 2:1199078/1‑150 (MQ=255) acaAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGcc < 2:1308100/150‑1 (MQ=255) aaTGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCAccc < 1:360836/150‑1 (MQ=255) tgtgACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAg < 2:135591/150‑1 (MQ=255) tgggACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAg < 2:1031921/147‑1 (MQ=255) gACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGAGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCa > 2:1065384/1‑150 (MQ=255) cATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAat < 1:500180/150‑1 (MQ=255) agaTGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCg < 2:746082/150‑1 (MQ=255) aTGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAg < 1:1512804/150‑1 (MQ=255) tGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGc > 1:1374838/1‑150 (MQ=255) tGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGc > 1:1651745/1‑150 (MQ=255) tGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGc > 1:384940/1‑150 (MQ=255) tGA‑AATACCGGGAAGAGACAAAGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCCAGCCACGCTGCCACCCAGCCAATCATCCAGc > 2:136482/1‑150 (MQ=255) gA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCa < 2:840527/150‑1 (MQ=255) aCCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACCCGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATCTTGTACCGTGGCCAGCCACGCTGACCCCCAGCCAATCATCGAGCATACca > 2:330032/1‑150 (MQ=255) aCCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACca < 1:735987/150‑1 (MQ=255) ccGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACcag > 2:1199300/1‑150 (MQ=255) gggAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACcagca > 2:1485121/1‑150 (MQ=255) gAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCagcagc < 1:1089580/150‑1 (MQ=255) gAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGAATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCagcagc > 1:522089/1‑150 (MQ=255) gagaCAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCATGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGATGCCACCCATCCAATAAGAGAGAATACCAGCAGCAAt > 2:93156/1‑150 (MQ=255) agaCAACGGTGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATa < 2:1736762/150‑1 (MQ=255) aCAACTGGGTCTCTTTCCCTGCTACTGAACCCATTGCAGGGAAAGAGTATAACACGCTTTAATAATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGc < 1:294406/150‑1 (MQ=255) cAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCa < 2:689066/150‑1 (MQ=255) cAACGGGGGCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGGGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCa < 2:1706635/150‑1 (MQ=255) aaCGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAg < 2:204497/150‑1 (MQ=255) aCGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAgg < 1:1273546/150‑1 (MQ=255) ggTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGTCGTAAAGTTGCGTAAATGTTGTACCGTGGCAAGCCAAGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCAtt < 2:286383/150‑1 (MQ=255) atactctTTCCCTGCAATGGGTTCCGTAGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCAtt > 2:394828/4‑150 (MQ=38) acactctTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCAtt > 2:1569875/4‑150 (MQ=255) tctcTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCa < 2:885453/150‑1 (MQ=255) ctctTTCCCTGCTACGGAACCCATTGCAGGGTAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACAGTGGCAAGCCACGCTGCCACCCAGCCACTCATCGAGCATACCAGCAGCAATAGCAGGCATTCAt > 1:45390/1‑150 (MQ=255) ctctTTCCCTGCAATGGGTTCCGTAGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCAt > 2:150487/1‑150 (MQ=39) tctTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCACGCCACGCTGCCACCCAGCCACTCATCGAGCATACCAGCAGCAATAGCAGGCATTCATc > 1:767457/1‑150 (MQ=255) tctTTCCCTGCAATGGGTTCCGTAGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATc > 1:1332484/1‑150 (MQ=39) ctTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTCCCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCGTACCTGCAGCAATAGCAGGCATTCATCg > 1:1132172/1‑150 (MQ=255) ctTTCCCTGCAATGGGTTCCGTAGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCg > 2:1508648/1‑150 (MQ=255) tttCCCTGCAATGGGTTCCGTAGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGa > 1:372465/1‑150 (MQ=255) ccTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGa > 2:862323/1‑150 (MQ=255) ccTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGa > 2:1940/1‑150 (MQ=255) cTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGAt > 1:1092682/1‑150 (MQ=255) tACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGACACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGc > 1:223792/1‑150 (MQ=255) ggAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCAt > 2:360129/1‑150 (MQ=255) ggAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCAt < 2:1770781/150‑1 (MQ=255) ggAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCAAt > 1:1100355/1‑150 (MQ=255) gAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCAtt < 1:1191178/150‑1 (MQ=255) gAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGAGTAAATGTTGTACCGTGGCAAGCCACGCAGCCACACAGCCAATCATCGAGCATACCAGCAGCAAAATCATGCATTCATCCAATGATAAGCCaat > 1:516182/1‑148 (MQ=255) aaCCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTg < 2:367180/150‑1 (MQ=255) aaCCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGACAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTg > 2:1227422/1‑150 (MQ=255) | AGCAACGAGGTTATCATTCACTGTTTTATCAGACCGTGATTTTATCCACAAGTTCAATGCAAGCTTGTGAATAAATTACGCACAAAATGTGACATAGAGATGA‑AATACCGGGAAGAGACAACGGGGTCTCTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTG > NC_000913/3600849‑3601142 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |