Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	3,815,859	Δ82 bp		[rph]–[rph]	[rph], [rph]

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	3815859	3815940	82	84 [0]	[0] 84	[rph]–[rph]	[rph],[rph]

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3815858	0 (0.000)	79 (1.310)	65/278	0.0	100%	pseudogene (24/48 nt)	rph	ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH
	?	NC_000913	3815941 =	0 (0.000)					pseudogene (609/669 nt)	rph	ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH

TCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCA  >  NC_000913/3815792‑3816086                                                                                                                                                      |                                                                                                                                                  aactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcc                                                                                                                                                   >  1:776329‑M2/150‑150 (MQ=255)   ctttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGt                                                                                                                                                 >  2:859334‑M2/148‑150 (MQ=255)   ctttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacatttctacagacaaaaaaaaggcgactcatcagtcgacttaaaaatcagattgccagcgccgcctactgcCGt                                                                                                                                                 >  2:85365‑M2/148‑150 (MQ=255)      taacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTccc                                                                                                                                              <  2:466955‑M2/6‑1 (MQ=255)       aacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTcccc                                                                                                                                             <  2:920442‑M2/7‑1 (MQ=255)           cctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctccacatcttacttttctacagacaaaaaaaaggcgacacatcattcgccttaaaaataagttttccagcgcccccttatgcCGACCCCTgcc                                                                                                                                         >  1:646214‑M2/140‑149 (MQ=255)           cctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgcctacgctcctcatcttacttttctacagacaaaaaaaaggcgactcaacagtcccctaaaaaatcagtttgccagcgccgccttctgcCGTACCCTGCa                                                                                                                                         >  1:976343‑M2/140‑150 (MQ=255)             tgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACt                                                                                                                                       <  2:1049580‑M2/13‑1 (MQ=255)               cttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCATTTc                                                                                                                                     <  1:340731‑M2/15‑1 (MQ=255)               cttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTc                                                                                                                                     <  1:857919‑M2/15‑1 (MQ=255)                  gctatgcgcaatttcaaaaaactggcgcttttatgttttcatcccttccctcctcatgtttcttttatacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgcctgcgccgccttctgcCGTCCCCTGCACTTCAat                                                                                                                                  <  1:316225‑M2/18‑1 (MQ=255)                   ctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgcattaaaaatcagtttgccagcgccgccttcggcCGGCCCCTGCACTGCAatg                                                                                                                                 >  2:104681‑M2/132‑150 (MQ=255)                   ctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactactcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAatg                                                                                                                                 >  2:911132‑M2/132‑150 (MQ=255)                    taagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgcctccttctgcCGTCCCCTGCACTTCAagga                                                                                                                                >  1:164863‑M2/131‑150 (MQ=255)                    taagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAatga                                                                                                                                <  1:568365‑M2/20‑1 (MQ=255)                      agcgcatattcattaaagtgtcgcttatatggttgaatgccttctctcctcatttaacttttctacagacaaaaaaatcgcgactcatcagtcgccttaaaaatcagtttgccagcgccgacttctgcCGTCCCCTGCACTTCAatgatg                                                                                                                              <  2:768839‑M2/22‑1 (MQ=255)                      agcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAatgatg                                                                                                                              >  2:317598‑M2/129‑150 (MQ=255)                       gcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATgc                                                                                                                             >  1:653515‑M2/128‑150 (MQ=255)                        cgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATgcg                                                                                                                            >  2:893593‑M2/127‑150 (MQ=255)                                 aataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaacggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTc                                                                                                                   <  1:244080‑M2/33‑1 (MQ=255)                                     aactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGtc                                                                                                               >  1:405724‑M2/114‑150 (MQ=255)                                        tggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGtcatc                                                                                                            <  2:978545‑M2/40‑1 (MQ=255)                                        tggcgctgatatggtttcatgacttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGtcatc                                                                                                            <  1:60262‑M2/40‑1 (MQ=255)                                               atatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGt                                                                                                     >  1:280936‑M2/104‑150 (MQ=255)                                                 tatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGACCCCTGCACTTCAATGATGCGCCCGTCTACGGACATCACTACCTTc                                                                                                   >  1:367614‑M2/102‑150 (MQ=255)                                                  atggtttcatgccttcgctcctcatcttacttttctacagccaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCa                                                                                                  <  1:1026403‑M2/50‑1 (MQ=255)                                                  atggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCa                                                                                                  <  1:508940‑M2/50‑1 (MQ=255)                                                    ggtttcatgccttcgctcctcatattacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATg                                                                                                <  1:889283‑M2/52‑1 (MQ=255)                                                     gtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGt                                                                                               >  1:774847‑M2/98‑150 (MQ=255)                                                         catgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGt                                                                                           >  1:36774‑M2/94‑150 (MQ=255)                                                          atgccttcgctcctcatcttacttttctacagacaaaaaaaaggagactcatcagtcgccttaaaaatcagtttgcctgcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGtc                                                                                          <  1:43000‑M2/58‑1 (MQ=255)                                                           tgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGtct                                                                                         >  1:812038‑M2/92‑150 (MQ=255)                                                              cttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCCCGTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTg                                                                                      >  1:374485‑M2/89‑150 (MQ=255)                                                                 cgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCgg                                                                                   <  2:696015‑M2/65‑1 (MQ=255)                                                                   ctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaaacagtttgccagcgccgccttctgcCGGCCCCTGCCCTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTAGGTGTCTgaggga                                                                                 >  1:276152‑M2/84‑148 (MQ=255)                                                                       tcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGt                                                                             >  2:317283‑M2/80‑150 (MQ=255)                                                                       tcatcttacctttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGt                                                                             >  1:85557‑M2/80‑150 (MQ=255)                                                                           cttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTc                                                                         <  1:1049675‑M2/75‑1 (MQ=255)                                                                            ttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCa                                                                        <  2:200141‑M2/76‑1 (MQ=255)                                                                              acttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAAc                                                                      >  2:918040‑M2/73‑150 (MQ=255)                                                                                 tttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGGTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTa                                                                   >  1:574320‑M2/70‑150 (MQ=255)                                                                                  gatatcagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTAt                                                                  >  2:397045‑M2/69‑150 (MQ=255)                                                                                    ctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGCGTCTTCAACGTattg                                                                >  1:197660‑M2/67‑149 (MQ=255)                                                                                     tacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTcc                                                               <  2:419900‑M2/85‑1 (MQ=255)                                                                                      actgacaaaaaaaaggcgactcatcaggcgccttaaaaatcagtttggcagcgccgccttctgcCGGCCCCTGCACTTCAATGATGCGCCAGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCa                                                              <  2:28584‑M2/86‑1 (MQ=255)                                                                                       cataaaaaaaaaagtctactcatcagtcgccttaaaaatcagtttgcaagcgccgccttctgcCGTCCCCTGCACTTTTATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAg                                                             <  2:976343‑M2/87‑1 (MQ=255)                                                                                         tacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCATTGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGAt                                                           <  1:747280‑M2/89‑1 (MQ=255)                                                                                           caaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCg                                                         >  2:601490‑M2/60‑150 (MQ=255)                                                                                            aaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGc                                                        >  2:331575‑M2/59‑150 (MQ=255)                                                                                             aaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCa                                                       >  2:890202‑M2/58‑150 (MQ=255)                                                                                             aaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCa                                                       >  1:1005622‑M2/58‑150 (MQ=255)                                                                                             aaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgcctgctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCa                                                       <  2:723997‑M2/93‑1 (MQ=255)                                                                                              aaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCaa                                                      <  2:476581‑M2/94‑1 (MQ=255)                                                                                                aaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAAc                                                    >  2:1034832‑M2/55‑150 (MQ=255)                                                                                                  aaggcgactgatgagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCg                                                  >  1:967578‑M2/53‑150 (MQ=255)                                                                                                  aaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCAGTTCAATGATGCGCCCGTCTACGGTCATCACTACGGTCATGTCGGTCTCTGCGGCAGAGTCTTCAGCGTAGTCCAGATCGCAAACCg                                                  >  2:35917‑M2/53‑150 (MQ=255)                                                                                                  aaggcgactcatcagtagccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCg                                                  <  1:291725‑M2/98‑1 (MQ=255)                                                                                                   aggcgactcataagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCGTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTGCAACGTATTCCAGATCGCAAACCGc                                                 >  2:941499‑M2/52‑150 (MQ=255)                                                                                                      cgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGCCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTc                                              <  2:197537‑M2/102‑1 (MQ=255)                                                                                                         ctcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGcc                                           >  2:795399‑M2/46‑150 (MQ=255)                                                                                                           catcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCCCTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAACCCGCTTCGCCGt                                         >  2:776729‑M2/44‑150 (MQ=255)                                                                                                           catcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCAGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGt                                         >  1:453894‑M2/44‑150 (MQ=255)                                                                                                            atcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGtt                                        <  1:859334‑M2/108‑1 (MQ=255)                                                                                                               agtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCCCTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCACACCGCTTCGCCGTTcac                                     >  2:205552‑M2/40‑150 (MQ=255)                                                                                                               agtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTcac                                     <  2:36774‑M2/111‑1 (MQ=255)                                                                                                               agtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTcac                                     <  2:776329‑M2/111‑1 (MQ=255)                                                                                                                     cttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTcc                               <  2:823072‑M2/117‑1 (MQ=255)                                                                                                                      ttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCg                              <  2:836620‑M2/118‑1 (MQ=255)                                                                                                                       taaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGa                             >  2:310229‑M2/32‑150 (MQ=255)                                                                                                                         aaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGGATTCCAGCTCGCAACCCGCTTCGCCGTTCACAATTCCGACa                           >  1:207506‑M2/30‑150 (MQ=255)                                                                                                                              cagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAAc                      <  1:310229‑M2/126‑1 (MQ=255)                                                                                                                                  ttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCg                  <  2:653515‑M2/130‑1 (MQ=255)                                                                                                                                     ccagcgccgccttctgcCGTCCCCTGCACTTCAATGCTGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCAGCGGCAGAGTCTTCACGGTATTCCAGATCGCCACCCGCGTCGCCGTTCCCAATTCCGACAGAAAcggcggcg               >  2:176312‑M2/18‑149 (MQ=255)                                                                                                                                     ccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCt               <  1:610682‑M2/133‑1 (MQ=255)                                                                                                                                     ccagcgaagccttctgaCGTCCCCTTCACTTCAATGATGCGCCCGTCTTCGGTTATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTATTCAACGTATTCCAGATCGCAATCCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCt               <  1:85365‑M2/133‑1 (MQ=255)                                                                                                                                       cgcgccgccttctgcCTTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTTCGTTCATGTCGGTCTCTGCGGCAGTGTCTTCAAGGTATTCCAGATCGCAAACAGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTAc             <  2:543616‑M2/135‑1 (MQ=255)                                                                                                                                       cgcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTAc             <  2:164863‑M2/135‑1 (MQ=255)                                                                                                                                          gccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCAt          <  1:276332‑M2/138‑1 (MQ=255)                                                                                                                                          gccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCAt          >  2:322465‑M2/13‑150 (MQ=255)                                                                                                                                             gccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATccc       <  1:466009‑M2/141‑1 (MQ=255)                                                                                                                                              ccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCt      <  1:317283‑M2/142‑1 (MQ=255)                                                                                                                                               cttctgcCGTCCCCTGCACTTCAATGATGCGCCAGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCtt     >  1:131570‑M2/8‑150 (MQ=255)                                                                                                                                                ttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCATCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCTGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCttt    <  2:646214‑M2/144‑1 (MQ=255)                                                                                                                                                  ctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCa  <  1:918040‑M2/146‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                  TCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCA  >  NC_000913/3815792‑3816086

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑