New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1097245 =NA (NA)3 (0.010) 3/274 NT 6.8% intergenic (+416/+320) ycdU/serX putative inner membrane protein/tRNA‑Ser
?NC_000913 1097274 = 42 (0.170)intergenic (+445/+291) ycdU/serX putative inner membrane protein/tRNA‑Ser

TCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTG  >  NC_000913/1097125‑1097422
                                                                                                                                                     |                                                                                                                                                     
ctcaccgccatatttatagcagagctcgtacgaaagttcgtgattttttttagtatattgcacacacgggggggatgtgaagccccgaccggggttcgacaactggcgacagccagttggacagaccgtgaacgcagtgagcgggctgcc                                                                                                                                                       <  1:974616‑M2/1‑1 (MQ=255)
ctcaccgccatatttatagaagagctcgtacgaatgtacgggcttttttttcgtatattgcacacaccggggggatgagcagccccgcccggggttcgccaacgggcgacagccagttggacagaccgtgaacgcagtgagcgggctgcc                                                                                                                                                       <  1:3263221‑M2/1‑1 (MQ=255)
ctcaccgccatatttaaagaagagctcgtacgaaagtacgggcttttttttcgtatattgcacacaccggggggatgagaagccccgaccggggttcgacaactggcgacagccagttggacagaccgtgaacgcagtgagcgggctgcc                                                                                                                                                       <  2:386972‑M2/1‑1 (MQ=255)
ctcaccgccatatttaaagaagagctcgtacgaaagtacgggcttttttttcgtatattgcacacaccggggggatgagaagccccgaccggggttcgacaactggcgacagccagttggacagaccgtgaacgcagtgagcgggctgcc                                                                                                                                                       <  2:386978‑M2/1‑1 (MQ=255)
     cgccatatttaaagaagagctcgtacgaaagtacgggcttttttttcgtatattgcacacaccggggggatgagaagccccgaccggggttcgacaactggcgacagccagttggacagaccgtgaacgcagtgagcgggctgcc                                                                                                                                                       <  1:4073719‑M2/1‑1 (MQ=255)
     cgccatatttaaagaagagctcgtacgaaagtacgggcttttttttcgtatattgcacacaccggggggatgagaagccccgaccggggttcgacaactggcgacagccagttggacagaccgtgaacgcagtgagcgggctgcc                                                                                                                                                       >  2:4073719‑M2/145‑145 (MQ=255)
         ctcATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCt                                                                                                                                              <  1:3281736/150‑1 (MQ=32)
          tcATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTg                                                                                                                                             >  2:3642118/1‑150 (MQ=32)
          tcATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTg                                                                                                                                             >  2:1443726/1‑150 (MQ=32)
          tcATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTg                                                                                                                                             >  2:912326/1‑150 (MQ=32)
          tcATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTg                                                                                                                                             >  1:3829950/1‑150 (MQ=32)
           cATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTGCTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTGCGCGGTCTGTCCCACTGGCTGt                                                                                                                                            >  1:3828792/1‑150 (MQ=255)
           cATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGt                                                                                                                                            >  1:4174387/1‑150 (MQ=32)
            aTCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTc                                                                                                                                           <  1:1069376/150‑1 (MQ=32)
              gcacccGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGc                                                                                                                                         <  2:2992427/147‑1 (MQ=1)
                ccccGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCa                                                                                                                                       <  2:2990243/150‑1 (MQ=32)
                 cccGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAg                                                                                                                                      <  1:1443726/150‑1 (MQ=32)
                 cccGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAg                                                                                                                                      <  1:3642118/150‑1 (MQ=32)
                   cGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGtt                                                                                                                                    <  2:409119/150‑1 (MQ=32)
                     gtgtgtGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCTTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGt                                                                                                                                  <  2:3029728/150‑1 (MQ=17)
                     gtgtgtGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCTTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGt                                                                                                                                  <  2:3029735/150‑1 (MQ=17)
                      tgtgtgCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTc                                                                                                                                 <  2:3829950/150‑1 (MQ=32)
                      tgtgtgCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTc                                                                                                                                 <  1:912326/150‑1 (MQ=32)
                         gtgCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATCTGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGaa                                                                                                                              <  1:3002962/150‑1 (MQ=17)
                         gtgCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGaa                                                                                                                              <  2:228893/150‑1 (MQ=32)
                          tgCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAAc                                                                                                                             <  2:1514744/150‑1 (MQ=32)
                          tgCAATACAAGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAAc                                                                                                                             >  1:3220264/1‑150 (MQ=17)
                             aaTACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGaa                                                                                                                              >  1:3219908/1‑146 (MQ=32)
                             aaTACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGaa                                                                                                                              <  2:3219908/146‑1 (MQ=32)
                             aaTACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAAcccc                                                                                                                          >  2:146359/1‑150 (MQ=32)
                             aaTACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGAGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGGTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAAcccc                                                                                                                          >  1:3926882/1‑150 (MQ=17)
                               cacacGAAAAAAAACCCCGGCCTTTCCTCCGAGCTCTACTTTAAATATGGCGGTGAGGGGGGGATGGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCATCTGGCTGTCGCCAGTTTTCGAACCCCgg                                                                                                                        <  1:1586426/149‑1 (MQ=11)
                                                                       gggatgagaagccccgaccggggttcgacaactggcgacagccagttggacagaccgtgaacgcagtgagcgggctgccc                                                                                                                                                      <  2:4241309‑M2/2‑1 (MQ=255)
                                                                       gggatgagaagccccgaccggggttcgacaactggcgacagccagttggacagaccgtgaacgcagtgagcgggctgccc                                                                                                                                                      >  1:4241309‑M2/79‑80 (MQ=255)
                                                                                    ccgaccggggttcgacaactggcgacagccagttggacagaccgtgaacgcagtgagcgggctgcc                                                                                                                                                       >  1:3852405‑M2/66‑66 (MQ=255)
                                                                                    ccgaccggggttcgacaactggcgacagccagttggacagaccgtgaacgcagtgagcgggctgcc                                                                                                                                                       <  2:3852405‑M2/1‑1 (MQ=255)
                                                                                                                      ggacagaccgtgaacgcagtgagcgggctgcCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGaaaaaa                                                                            >  2:1438666‑M2/32‑106 (MQ=255)
                                                                                                                      ggacagaccgtgaacgcagtgagcgggctgcCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGaaaaaa                                                                            <  1:1438666‑M2/75‑1 (MQ=255)
                                                                                                                       gacagaccgtgaacgcagtgagcgggctgcCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAg                               >  1:2771404‑M2/31‑150 (MQ=255)
                                                                                                                                 tCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGGTTCTCAACCCCCCGGTGTGTGCAATATACGAAAAAAAATACCGTACTTTCGTAGGAGCGCTTCTTTAAATATTGCGGGGGGGGGGGGATTg                     >  1:3285456/1‑150 (MQ=11)
                                                                                                                                  cACTGCGTTCCCGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGAAATATACGAAAAAAAAGCCCGTACTTTCTTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGa                    <  1:2681972/150‑1 (MQ=9)
                                                                                                                                   aCTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGAc                   >  2:683722/1‑150 (MQ=32)
                                                                                                                                   aCTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGAc                   <  2:3895594/150‑1 (MQ=32)
                                                                                                                                   aCTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGGGAgggggggcgtcga                   >  1:2199748/1‑144 (MQ=0)
                                                                                                                                   aCTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCGTCTCATCCCCCCCGTGTGTGCACTATACGAAAAAAAAGCCCGTACTGTCGGCCGAGCGCGTCTTTAAAGATGGCGGGGAgggggggcgtcga                   >  1:477817/1‑144 (MQ=1)
                                                                                                                                    cTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGAc                   <  2:3895694/150‑1 (MQ=17)
                                                                                                                                        gTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACtcgct              >  1:3198749/1‑150 (MQ=34)
                                                                                                                                        gTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACtcgct              <  2:3878722/150‑1 (MQ=34)
                                                                                                                                        gTTCACGGTCTGTCCAACTGGCTGTCGCCAGGTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGGACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACtcgct              >  1:2584019/1‑150 (MQ=21)
                                                                                                                                         ttCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACtcgctt             >  2:995876/1‑150 (MQ=34)
                                                                                                                                          tCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACtcgcttc            <  1:778792/150‑1 (MQ=34)
                                                                                                                                          tCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACtcgcttc            <  1:2917420/150‑1 (MQ=34)
                                                                                                                                            aCGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACtcgcttcgc          <  2:1735442/150‑1 (MQ=34)
                                                                                                                                            aCGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACtcgcttcgc          >  2:4166839/1‑150 (MQ=34)
                                                                                                                                              ggTCTGTCCAACTGGCTGTCGCCAGGTGTCGAACCCCGGTCGGGGCTTCTCCTCCCGCCGGTGTGTTGAATATACTAAAAAAAAGGGCTTAATTTAGAACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTtcgctc        <  1:390819/150‑1 (MQ=11)
                                                                                                                                                tCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCCTCCCCCCGGTGTGTGCACTAGACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGTCTCGCGtcgctcgc      >  2:4087115/1‑150 (MQ=11)
                                                                                                                                                tCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTtcgctcgc      >  2:1256127/1‑150 (MQ=34)
                                                                                                                                                   gTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTATAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCt   >  2:3475101/1‑150 (MQ=21)
                                                                                                                                                   gTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAAGATGGCGGTGAGGGGGGGATTGTCTCGCTACGATCGCCCt   >  2:153557/1‑150 (MQ=11)
                                                                                                                                                    tCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGTCTCGCTTCGCTCGCCCTg  >  1:2382430/1‑150 (MQ=21)
                                                                                                                                                    tCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTg  >  1:2353489/1‑150 (MQ=34)
                                                                                                                                                    tCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTg  >  1:1114324/1‑150 (MQ=34)
                                                                                                                                                     CCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCgg                                                                                                  >  2:159890‑M2/1‑54 (MQ=255)
                                                                                                                                                     CCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCgg                                                                                                  >  2:159757‑M2/1‑54 (MQ=255)
                                                                                                                                                     CCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCgg                                                                                                  <  1:159890‑M2/54‑1 (MQ=255)
                                                                                                                                                     CCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCgg                                                                                                  <  1:159757‑M2/54‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
TCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTG  >  NC_000913/1097125‑1097422

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.