| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3094073 | NA (NA) | 11 (0.040) | 5/264 | NT | NA | noncoding (108/125 nt) | REP216 (repetitive extragenic palindromic) element; contains 3 REP sequences | REP216 (repetitive extragenic palindromic) element; contains 3 REP sequences |
| ? | NC_000913 | = 3094083 | NA (NA) | noncoding (118/125 nt) | REP216 (repetitive extragenic palindromic) element; contains 3 REP sequences | REP216 (repetitive extragenic palindromic) element; contains 3 REP sequences | |||||
GCGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCCGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3093918‑3094073‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgatGCGCAAGCTTATCGGGCCTACAAAGGCAATAAATGTCTGATGCGACGCTAACGCGTCTTATCAGACCTATAGCCGCTGCCAGATGTGTGCTGGATAAGGTGTTCACGCCGCATCCGGCAATAAGACGCGATGATATTATTTACACTC < NC_000913/3094083‑3093937 GCGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGG > 1:1841285/1‑150GCGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGG < 1:219564/150‑1GCGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGG < 1:250542/150‑1GCGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGG < 1:315581/150‑1 CGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGC < 2:1869721/150‑1 CGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGC < 1:4110810/150‑1 GATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCC > 2:209125/1‑150 GATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCC > 2:3309255/1‑150 ATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCC > 2:572525/1‑150 ATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCC > 2:2402227/1‑150 ATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCC > 2:2596383/1‑150 ATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCC < 2:4154383/150‑1 ATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCC > 2:572474/1‑150 ATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCC < 2:2054930/150‑1 ATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCC < 2:2054982/150‑1 ATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCC < 1:4357026/150‑1 TTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCCG > 1:920466/1‑150 TTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCCGA > 1:3542946/1‑150 TTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCCGA < 2:1853828/150‑1 TAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACCTCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCCGAT < 2:1257696/150‑1 TAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCCGAT < 2:684993/150‑1 TAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCCGAT < 2:74644/150‑1 TAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCCGAT < 2:917979/150‑1 TAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCCGAT < 1:224621/150‑1 TAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCCGAT < 1:224576/150‑1 TAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCCGAT < 2:2019073/150‑1 GTAAATAATTTCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCTGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCCGATGCGCAAGCTTATCGGGC < 1:4787270/150‑1 GTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCCGATGCGCAAGCTTATCGGGC < 1:1626170/150‑1 GTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCCGATGCGCAAGCTTATCGGGC < 1:4787283/150‑1 GTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCCGATGCGCAAGCTTATCGGGC < 1:4786864/150‑1 GTAAATAAGATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCCGATGCGCAAGCTTATCGGGC < 2:2291280/150‑1 TAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCCGATGCGCAAGCTTATCGGGCC < 2:1691488/150‑1 TAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCCGATGCGCAAGCTTATCGGGCC < 2:1691477/150‑1 TAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCCGATGCGCAAGCTTATCGGGCC < 2:1269142/150‑1 ATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTATGCCCGATGCGCAAGCTTATCGGGCCTACAAAGG < 2:2532811/150‑1 GGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCCGATGCGCAAGCTTATCGGGCCTACAAAG > 1:732081/1‑89 GGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCCGATGCGCAAGCTTATCGGGCCTACAAAG < 2:732081/89‑1 tCCGATGCGCAAGCTTATCGGGCCTACAAAGGCAATAAATGTCTGATGCGACGCTAACGCGTCTTATCAGACCTATAGCCGCTGCCAGATGTGTGCTGGATAAGGTGTTCACGCCGCATCCGGCAATAAGACGCGATGATATTATTTACA > 2:2642342/2‑150 CCCGATGCGCAAGCTTATCGGGCCTACAAAGGCAATAAATGTCTGATGCGACGCTAACGCGTCTTATCAGACCTATAGCCGCTGCCAGATGTGTGCTGGATAAGGTGTTCACGCCGCATCCGGCAATAAGACGCGATGATATTATTTACA > 2:1142771/1‑150 CCCGATGCGCAAGCTTATCGGGCCTACAAAGGCAATAAATGTCTGATGCGACGCTAACGCGTCTTATCAGACCTATAGCCGCTGCCAGATGTGTGCTGGATAAGGTGTTCACGCCGCATCCGGCAATAAGACGCGATGATATTATTTACA > 1:1304936/1‑150 CCCGATGCGCAAGCTTATCGGGCCTACAAAGGCAATAAATGTCTGATGCGACGCTAACGCGTCTTATCAGACCTATAGCCGCTGCCAGATGTGTGCTGGATAAGGTGTTCACGCCGCATCCGGCAATAAGACGCGATGATATTATTTACA < 1:4568064/150‑1 CCCGATGCGCAAGCTTATCGGGCCTACAAAGGCAATAAATGTCTGATGCGACGCTAACGCGTCTTATCAGACCTATAGCCGCTGCCAGATGTGTGCTGGATAAGGTGTTCACGCCGCATCCGGCAATAAGACGCGATGATATTATTTACA < 2:857022/150‑1 CCCGATGCGCAAGCTTATCGGGCCTACAAAGGCAATAAATGTCTGATGCGACGCTAACGCGTCTTATCAGACCTATAGCCGCTGCCAGATGTGTGCTGGATAAGGTGTTCACGCCGCATCCGGCAATAAGACGCGATGATATTATTTACA < 2:857047/150‑1 CCGATGCGCAAGCTTATCGGGCCTACAAAGGCAATAAATGTCTGATGCGACGCTAACGCGTCTTATCAGACCTATAGCCGCTGCCAGATGTGTGCTGGATAAGGTGTTCACGCCGCATCCGGCAATAAGACGCGATGATATTATTTACAC > 1:294907/1‑150 CCGATGCGCAAGCTTATCGGGCCTACAAAGGCAATAAATGTCTGATGCGACGCTAACGCGTCTTATCAGACCTATAGCCGCTGCCAGATGTGTGCTGGATAAGGTGTTCACGCCGCATCCGGCAATAAGACGCGATGATATTATTTACAC > 1:2728827/1‑150 CGATGCGCAAGCTTATCGGGCCTACAAAGGCAATAAATGTCTGATGCGACGCTAACGCGTCTTATCAGACCTATAGCCGCTGCCAGATGTGTGCTGGATAAGGTGTTCACGCCGCATCCGGCAATAAGACGCGATGATATTATTTACACT > 2:3072343/1‑150 GATGCGCAAGCTTATCGGGCCTACAAAGGCAATAAATGTCTGATGCGACGCTAACGCGTCTTATCAGACCTATAGCCGCTGCCAGATGTGTGCTGGATAAGGTGTTCACGCCGCATCCGGCAATAAGACGCGATGATATTATTTACACTC > 1:3922517/1‑150 GATGCGCAAGCTTATCGGGCCTACAAAGGCAATAAATGTCTGATGCGACGCTAACGCGTCTTATCAGACCTATAGCCGCTGCCAGATGTGTGCTGGATAAGGTGTTCACGCCGCATCCGGCAATAAGACGCGATGATATTATTTACACTC > 2:936488/1‑150 GATGCGCAAGCTTATCGGGCCTACAAAGGCAATAAATGTCTGATGCGACGCTAACGCGTCTTATCAGACCTATAGCCGCTGCCAGATGTGTGCTGGATAAGGTGTTCACGCCGCATCCGGCAATAAGACGCGATGATAATATATAAACTC > 2:2578684/1‑150 GCGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCCGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3093918‑3094073‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgatGCGCAAGCTTATCGGGCCTACAAAGGCAATAAATGTCTGATGCGACGCTAACGCGTCTTATCAGACCTATAGCCGCTGCCAGATGTGTGCTGGATAAGGTGTTCACGCCGCATCCGGCAATAAGACGCGATGATATTATTTACACTC < NC_000913/3094083‑3093937 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |