| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4178498 = | 257 (0.900) | 4 (0.010) | 4/272 | NT | 1.5% | coding (52/429 nt) | rplK | 50S ribosomal subunit protein L11 |
| ? | NC_000913 | 4178538 = | 268 (0.960) | coding (92/429 nt) | rplK | 50S ribosomal subunit protein L11 | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GTGAAAGAACGGTCAGCGTAAACGGTGATTACTACCGGAATCGGCAGACCTTTTTCGATGGAATCAGTTTTTGCGTTGAACGCTTTGCAGAATTCCATGATGTTTACGCCCTGCTGACCCAGAGCCGGACCTACTGGCGGACTCGGGTTAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4178649‑4178498‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCAAAAACTGATTCCATCGAAAAAGGTCTGCCGATTCCGGTAGTAATCACCGTTTACGCTGACCGTTCTTTCACTTTCGTTACCAAGACCCCGCCGGCAGCAGTTCTGCTG > NC_000913/4178538‑4178686 GTGAAAGAACGGTCAGCGTAAACGGTGATTACTACCGGAATCGGCAGACCTTTTTCGATGGAATCAGTTTTTGCGTTGAACGCTTTGCAGAATTCCATGATGTTTACGCCCTGCTGACCCAGAGCCGGACCTACTGGCGGACTCGGGTTA < 1:1458015/150‑1GTGAAAGAACGGTCAGCGTAAACGGTGATTACTACCGGAATCGGCAGACCTTTTTCGATGGAATCAGTTTTTGCGTTGAACGCTTTGCAGAATTCCATGATGTTTACGCCCTGCTGACCCAGAGCCGGACCTACTGGCGGACTCGGGTTA < 1:201126/150‑1 GAAAGAACGGTCAGCGTAAACGGTGATTACTACCGGAATCGGCAGACCTTTTTCGATGGAATCAGTTTTTGCGTTGAACGCTTTGCAGAATTCCATGATGTTTACGCCCTGCTGACCCAGAGCCGGACCTACTGGCGGACTCGGGTTAGC > 2:2078452/1‑150 GAAAGAACGGTCAGCGTAAACGGTGATTACTACCGGAATCGGCAGACCTTTTTCGATGGAATCAGTTTTTGCGTTGAACGCTTTGCAGAATTCCATGATGTTTACGCCCTGCTGACCCAGAGCCGGACCTACTGGCGGACTCGGGTTAGC > 2:1594680/1‑150 GAAAGAACGGTCAGCGTAAACGGTGATTACTACCGGAATCGGCAGACCTTTTTCGATGGAATCAGTTTTTGCGTTGAACGCTTTGCAGAATTCCATGATGTTTACGCCCTGCTGACCCAGAGCCGGACCTACTGGCGGACTCGGGTTAGC > 2:1337820/1‑150 GAAAGAACGGTCAGCGTAAACGGTGATTACTACCGGAATCGGCAGACCTTTTTCGATGGAATCAGTTTTTGCGTTGAACGCTTTGCAGAATTCCATGATGTTTACGCCCTGCTGACCCAGAGCCGGACCTACTGGCGGACTCGGGTTAGC > 2:1049422/1‑150 GAAAGAACGGTCAGCGTAAACGGTGATTACTACCGGAATCGGCAGACCTTTTTCGATGGAATCAGTTTTTGCGATGAACGCTTTGCAGAATTCCATGATGTTTACGCCCTGCTGACCCAGAGCCGGACCTACTGGCGGACTCGGGTTAGC > 2:4222105/1‑150 ACGCCCTGCTGACCCAGAGCCGGACCTACTGGCGGACTCGGGTTAGCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCAAAAACTGATTCCATCGAAAAAGGTCTGCCGATTCCGGTAGTAATCACCGTTTACGCTGACCG > 1:131129/1‑150 CTGCTGACCCAGAGCCGGACCTACTGGCGGACTCGGGTCAGCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCAAAAACTGATTCCATCGAAAAAGGTCTGCCGATTCCGGTAGTAATCACCGTTTACGCTGACCGTTCTT > 2:1360432/1‑150 TGCTGACCCAGAGCCGGACCTACTGGCGGACTCGGGTTAGCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCAAAAACTGATTCCATCGAAAAAGGTCTGCCGATTCCGGTAGTAATCACCGTTTACGCTGACCGTTCTTT > 1:2501237/1‑150 CTGGCGGACTCGGGTCAGCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCAAAAACTGATTCCATCGAAAAAGGTCTGCCGATTCCGGTAGTAATCACCGTTTACGCTGACCGTTCTTTCACTTTCGTTACCAAGACCCCG < 1:1360432/150‑1 GCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCAAAAACTGATTCCATCGAAAAAGGTCTGCCGATTCCGGTAGTAATCACCGTTTACGCTGACCGTTCTTTCACTTTCGTTACCAAGACCCCGCCGGCAGCGGTTCTGCT > 1:3376518/1‑150 GCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCAAAAACTGATTCCATCGAAAAAGGTCTGCCGATTCCGGTAGTAATCACCGTTTACGCTGACCGTTCTTTCACTTTCGTTACCAAGACCCCGCCGGCAGCAGTTCTGCT > 2:465286/1‑150 GCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCAAAAACTGATTCCATCGAAAAAGGTCTGCCGATTCCGGTAGTAATCACCGTTTACGCTGACCGTTCTTTCACTTTCGTTACCAAGACCCCGCCGGCAGCAGTTCTGCT > 2:2729278/1‑150 GCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCAAAAACTGATTCCATCGAAAAAGGTCTGCCGATTCCGGTAGTAATCACCGTTTACGCTGACCGTTCTTTCACTTTCGTTACCAAGACCCCGCCGGCAGCAGTTCTGCT > 2:1181127/1‑150 GCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCAAAAACTGATTCCATCGAAAAAGGTCTGCCGATTCCGGTAGTAATCACCGTTTACGCTGACCGTTCTTTCACTTTCGTTACCAAGACCCCGCCGGCAGCAGTTCTGCT < 1:3787470/150‑1 GCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCAAAAACTGATTCCATCGAAAAAGGTCTGCCGATTCCGGTAGTAATCACCGTTTACGCTGACCGTTCTTTCACTTTCGTTACCAAGACCCCGCCGGCAGCAGTTCTGCT < 1:3787467/150‑1 GCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCAAAAACTGATTCCATCGAAAAAGGTCTGCCGATTCCGGTAGTAATCACCGTTTACGCTGACCGTTCTTTCACTTTCGTTACCAAGACCCCGCCGGCAGCAGTTCTGCT < 1:3787448/150‑1 GCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCAAAAACTGATTCCATCGAAAAAGGTCTGCCGATTCCGGTAGTAATCACCGTTTACGCTGACCGTTCTTTCACTTTCGTTACCAAGACCCCGCCGGCAGCAGTTCTGCT < 1:3604466/150‑1 GCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCAAAAACTGATTCCATCGAAAAAGGTCTGCCGATTCCGGTAGTAATCACCGTTTACGCTGACCGTTCTTTCACTTTCGTTACCAAGACCCCGCCGGCAGCAGTTCTGCT < 1:321208/150‑1 GCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCAAAAACTGATTCCATCGAAAAAGGTCTGCCGATTCCGGTAGTAATCACCGTTTACGCTGACCGTTCTTTAACTTTCGTTACCAATACACAGCCGGCAGCAGATCTGCT > 2:2729402/1‑150 CAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCAAAAACTGATTCCATCGAAAAAGGTCTGCCGATTCCGGTAGTAATCACCGTTTACGCTGACCGTTCTTTCACTTTCGTTACCAAGACCCCGCCGGCAGCAGTTCTGCTG < 2:2501237/150‑1 CAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCAAAAACTGATTCCATCGAAAAAGGTCTGCCGATTCCGGTAGTAATCACCGTTTACGCTGACCGTTCTTTCACTTTCGTTACCAAGACCCCGCCGGCAGCAGTTCTGCTG > 1:2735764/1‑150 CAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCAAAAACTGATTCCATCGAAAAAGGTCTGCCGATTCCGGTAGTAATCACCGTTTACGCTGACCGTTCTTTCACTTTCGTTACCAAGACCCCGCCGGCAGCAGTTCTGCTG > 1:2373787/1‑150 GTGAAAGAACGGTCAGCGTAAACGGTGATTACTACCGGAATCGGCAGACCTTTTTCGATGGAATCAGTTTTTGCGTTGAACGCTTTGCAGAATTCCATGATGTTTACGCCCTGCTGACCCAGAGCCGGACCTACTGGCGGACTCGGGTTAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4178649‑4178498‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCAAAAACTGATTCCATCGAAAAAGGTCTGCCGATTCCGGTAGTAATCACCGTTTACGCTGACCGTTCTTTCACTTTCGTTACCAAGACCCCGCCGGCAGCAGTTCTGCTG > NC_000913/4178538‑4178686 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |