| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4179656 | 248 (0.870) | 5 (0.020) | 3/266 | NT | 1.9% | intergenic (+73/‑340) | rplA/rplJ | 50S ribosomal subunit protein L1/50S ribosomal subunit protein L10 |
| ? | NC_000913 | = 4179766 | 267 (0.980) | intergenic (+183/‑230) | rplA/rplJ | 50S ribosomal subunit protein L1/50S ribosomal subunit protein L10 | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ATCAAGAAAGTTAGCATCTCCACCACCATGGGTGCAGGTGTTGCAGTTGACCAGGCTGGCCTGAGCGCTTCTGTAAACTAATGCCTTTACGTGGGCGGTGATTTTGTCTACAATCTTACCCCCACGTATAATGCTTAATGCAGACGTATATCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4179503‑4179656‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tatccgTCGCTATTCAGCTTGTGACGGCGTTGGCTTCCTTCATTCGCACCAGTCACATAGTTAGCTATGCTCCTGGCGACTCACTCAGTTGCCGCCTTGCCACAACCCGAATATCTCGGATATACGTCTGCATTAAGCATTATACGTGGGGGTAA < NC_000913/4179766‑4179618 ATCAAGAAAGTTAGCATCTCCACCACCATGGGTGCAGGTGTTGCAGTTGACCAGGCTGGCCTGAGCGCTTCTGTAAACTAATGCCTTTACGTGGGCGGTGATTTTGTCTACAATCTTACCCCCACGTATAATGCTTAATGCAGACGTATA > 2:864831/1‑150ATCAAGAAAGTTAGCATCTCCACCACCATGGGTGCAGGTGTTGCAGTTGACCAGGCTGGCCTGAGCGCTTCTGTAAACTAATGCCTTTACGTGGGCGGTGATTTTGTCTACAATCTTACCCCCACGTATAATGCTTAATGCAGACGTATA > 2:3384832/1‑150ATCAAGAAAGTTAGCATCTCCACCACCATGGGTGCAGGTGTTGCAGTTGACCAGGCTGGCCTGAGCGCTTCTGTAAACTAATGCCTTTACGTGGGCGGTGATTTTGTCTACAATCTTACCCCCACGTATAATGCTTAATGCAGACGTATA > 2:2400726/1‑150ATCAAGAAAGTTAGCATCTCCACCACCATGGGTGCAGGTGTTGCAGTTGACCAGGCTGGCCTGAGCGCTTCTGTAAACTAATGCCTTTACGTGGGCGGTGATTTTGTCTACAATCTTACCCCCACGTATAATGCTTAATGCAGACGTATA > 2:1528643/1‑150ATCAAGAAAGTTAGCATCTCCACCACCATGGGTGCAGGTGTTGCAGTTGACCAGGCTGGCCTGAGCGCTTCTGTAAACTAATGCCTTTACGTGGGCGGTGATTTTGTCTACAATCTTACCCCCACGTATAATGCTTAATGCAGACGTATA > 1:3394461/1‑150 AAGAAAGTTAGCATCTCCACCACCATGGGTGCAGGTGTTGCAGTTGACCAGGCTGGCCTGAGCGCTTCTGTAAACTAATGCCTTTACGTGGGCGGTGATTTTGTCTACAATCTTACCCCCACGTATAATGCTTAATGCAGACGTATATCC > 1:4090819/1‑150 AAGAAAGTTAGCATCTCCACCACCATGGGTGCAGGTGTTGCAGTTGACCAGGCTGGCCTGAGCGCTTCTGTAAACTAATGCCTTTACGTGGGCGGTGATTTTGTCTACAATCTTACCCCCACGTATAATGCTTAATGCAGACGTATATCC < 2:764852/150‑1 AAGAAAGTTAGCATCTCCACCACCATGGGTGCAGGTGTTGCAGTTGACCAGGCTGGCCTGAGCGCTTCTGTAAACTAATGCCTTTACGTGGGCGGTGATTTTGTCTACAATCTTACCCCCACGTATAATGCTTAATGCAGACGTATATCC > 2:2901547/1‑150 AAGAAAGTTAGCATCTCCACCACCATGGGTGCAGGTGTTGCAGTTGACCAGGCTGGCCTGAGCGCTTCTGTAAACTAATGCCTTTACGTGGGCGGTGATTTTGTCTACAATCTTACCCCCACGTATAATGCTTAATGCAGACGTATATCC > 1:710963/1‑150 AAGAAAGTTAGCATCTCCACCACCATGGGTGCAGGTGTTGCAGTTGACCAGGCTGGCCTGAGCGCTTCTGTAAACTAATGCCTTTACGTGGGCGGTGATTTTGTCTACAATCTTACCCCCACGTATAATGCTTAATGCAGACGTATATCC > 1:1251575/1‑150 AAGAAAGTTAGCATCTCCACCACCATGGGTGCAGGTGTTGCAGTTGACCAGGCTGGCCTGAGCGCTTCTGTAAACTAATGCCTTTACGTGGGCGGTGATTTTGTCTACAATCTTACCCCCACGTATAATGCTTAATGCAGACGTATATCC > 1:3996654/1‑150 AAGAAAGTTAGCATCTCCACCACCATGGGTGCAGGTGTTGCAGTTGACCAGGCTGGCCTGAGCGCTTCTGTAAACTAATGCCTTTACGTGGGCGGTGATTTTGTCTACAATCTTACCCCCACGTATAATGCTTAATGCAGACGTATATCC > 1:1256725/1‑150 AGAAAGTTAGCATCTCCACCACCATGGGTGCAGGTGTTGCAGTTGACCAGGCTGGCCTGAGCGCTTCTGTAAACTAATGCCTTTACGTGGGCGGTGATTTTGTCTACAATCTTACCCCCACGTATAATGCTTAATGCAGACGTATATCCG > 1:1991942/1‑150 AGAAAGTTAGCATCTCCACCACCATGGGTGCAGGTGTTGCAGTTGACCAGGCTGGCCTGAGCGCTTCTGTAAACTAATGCCTTTACGTGGGCGGTGATTTTGTCTACAATCTTACCCCCACGTATAATGCTTAATGCAGACGTATATCCG > 2:2527422/1‑150 AGAAAGTTAGCATCTCCACCACCATGGGTGCAGGTGTTGCAGTTGACCAGGCTGGCCTGAGCGCTTCTGTAAACTAATGCCTTTACGTGGGCGGTGATTTTGTCTACAATCTTACCCCCACGTATAATGCTTAATGCAGACGTATATCCG > 1:1991908/1‑150 AGAAAGTTAGCATCTCCACCACCATGGGTGCAGGTGTTGCAGTTGACCAGGCTGGCCTGAGCGCTTCTGTAAACTAATGCCTTTACGTGGGCGGTGATTTTGTCTACAATCTTACCCCCACGTATAATGCTTAATGCAGACGTATATCCG > 1:3654054/1‑150 AGAAAGTTAGCATCTCCACCACCATGGGTGCAGGTGTTGCAGTTGACCAGGCTGGCCTGAGCGCTTCTGTAAACTAATGCCTTTACGTGGGCGGTGATTTTGTCTACAATCTTACCCCCACGTATAATGCTTAATGCAGACGTATATCCG < 1:3626557/150‑1 AGAAAGTTAGCATCTCCACCACCATGGGTGCAGGTGTTGCAGTTGACCAGGCTGGCCTGAGCGCTTCTGTAAACTAATGCCTTTACGTGGGCGGTGATTTTGTCTACAATCTTACCCCCACGTATAATGCTTAATGCAGACGTATATCCG > 1:3654084/1‑150 AGAAAGTTAGCATCTCCACCACCATGGGTGCAGGTGTTGCAGTTGACCAGCCTGGCCTGAGCGCTTCTGTAAACTAATGCCATTACGTGGGCGGTGATTTTGTCTACAATCTTACCCCCACGTATAATGCTTAATGCAGACGTATATCCG < 2:159559/150‑1 AGAAAGTTAGCATCTCCAACACCATGGGTGCAGGTGTTGCAGTTGACCAGGCTGGCCTGAGCGCTTCTGTAAACTAATGCCTTTACGTGGTCGGTGATTTTGTCTACAATCTTACCCCCACGTATAATGCTTAATGCAGACGTATATCCG < 2:159659/150‑1 CGCTTCTGTAAACTAATGCCTTTACGTGGGCGGTGATTTTGTCTACAATCTTACCCCCACGTATAATGCTTAATGCAGACGTATATCCGTCGCTATTCAGCTTGTGACGGCGTTGGCTTCCTTCATTCGCACCAGTCACATAGTTAGCTA > 1:1908051/1‑150 GGTGATTTTGTCTACAATCTTACCCCCACGTATAATGCTTAATGCAGACGTATATCCG‑AGATATTCGGGTTGTGACGGCGTTGGCTTCCTTCATTCGCACCAGTCACATAGTTAGCTATGCTCCTGGCGACTCACTCAGTTGCCGCCTTG < 2:3684021/150‑1 GGTGATTTTGTCTACAATCTTACCCCCACGTATAATGCTTAATGCAGACGTATATCCG‑AGATATTCGGGTTGTGACGGCGTTGGCTTCCTTCATTCGCACCAGTCACATAGTTAGCTATGCTCCTGGCGACTCACTCAGTTGCCGCCTTG < 2:739537/150‑1 TGTCTACAATCTTACCCCCACGTATAATGCTTAATGCAGACGTATATCCG‑AGATATTCGGCTTGTGACGGCGTTGGCTTCCTTCATTCGCACCAGTCACATAGTTAGCTATGCTCCTGGCGACTCACTCAGTTGCCGCCTTGCCACAACC < 1:1569972/150‑1 GTCTACAATCTTACCCCCACGTATAATGCTTAATGCAGACGTATATCCGTCGCTATTCAGCTTGTGACGGCGTTGGCTTCCTTCATTCGCACCAGTCACATAGTTAGCTATGCTCCTGGCGACTCACTCAGTTGCCGCCTTGCCACAACC < 2:1908051/150‑1 ATCCGTCGCTATTCAGCTTGTGACGGCGTTGGCTTCCTTCATTCGCACCAGTCACATAGTTAGCTATGCTCCTGGCGACTCACTCAGTTGCCGCCTTGCCACAACCCGAATATCTCGGATATACGTCTGCATTAAGCATTATACGTGGGG < 1:1339066/150‑1 ATCCGTCGCTATTCAGCTTGTGACGGCGTTGGCTTCCTTCATTCGCACCAGTCACATAGTTAGCTATGCTCCTGGCGACTCACTCAGTTGCCGCCTTGCCACAACCCGAATATCTCGGATATACGTCTGCATTAAGCATTATACGTGGGG < 1:1339005/150‑1 TCCGTCGCTATTCAGCTTGTGACGGCGTTGGCTTCCTTCATTCGCACCAGTCACATAGTTAGCTATGCTCCTGGCGACTCACTCAGTTGCCGCCTTGCCACAACCCGAATATCTCGGATATACGTCTGCATTAAGCATTATAAGTGGGGG > 1:3290223/1‑150 TCCGTCGCTATTCAGCTTGTGACGGCGTTGGCTTCCTTCATTCGCACCAGTCACATAGTTAGCGATGCTCCTGGCGACGCACTCAGGTGCCGCCTGGCCACAACCCCAAAATCTCGGAGATACGTCTGCATTAAGCATTATACGGGGGGG > 1:1752221/1‑150 CGTCGCTATTCAGCTTGTGACGGCGTTGGCTTCCTTCATTCGCACCAGTCACATAGTTAGCTATGCTCCTGGCGACTCACTCAGTTGCCGCCTTGCCACAACCCGAATATCTCGGATATACGTCTGCATTAAGCATTATACGTGGGGGTA > 1:1886701/1‑150 CGTCGCTATTCAGCTTGTGACGGCGTTGGCTTCCTTCATTCGCACCAGTCACATAGTTAGCTATGCTCCTGGCGACTCACACAGTTGCCGCCTTGCCACAACCCCAATATCTCGGATATACGTCTGCATTAAGCATTATACGTGGGGGTA > 1:1887006/1‑150 GTCGCTATTCAGCTTGTGACGGCGTTGGCTTCCTTCATTCGCACCAGTCACATAGTTAGCTATGCTCCTGGCGACTCACTCAGTTGCCGCCTTGCCACAACCCGAATATCTCGGATATACGTCTGTATTAAGCATTATACGTGGGGGTAA < 1:4672469/150‑1 GTCGCTATTCAGCTTGTGACGGCGTTGGCTTCCTTCATTCGCACCAGTCACATAGTTAGCTATGCTCCTGGCGACTCACTCAGTTGCCGCCTTGCCACAACCCGAATATCTCGGATATACGTCTGCATTAAGCATTATACGTGGGTGTAA < 1:904525/150‑1 GTCGCTATTCAGCTTGTGACGGCGTTGGCTTCCTTCATTCGCACCAGTCACATAGTTAGCTATGCTCCTGGCGACTCACTCAGTTGCCGCCTTGCCACAACCCGAATATCTCGGATATACGTCTGCATTAAGCATTATACGTGGGGGTAA > 2:1594049/1‑150 ATCAAGAAAGTTAGCATCTCCACCACCATGGGTGCAGGTGTTGCAGTTGACCAGGCTGGCCTGAGCGCTTCTGTAAACTAATGCCTTTACGTGGGCGGTGATTTTGTCTACAATCTTACCCCCACGTATAATGCTTAATGCAGACGTATATCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4179503‑4179656‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tatccgTCGCTATTCAGCTTGTGACGGCGTTGGCTTCCTTCATTCGCACCAGTCACATAGTTAGCTATGCTCCTGGCGACTCACTCAGTTGCCGCCTTGCCACAACCCGAATATCTCGGATATACGTCTGCATTAAGCATTATACGTGGGGGTAA < NC_000913/4179766‑4179618 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |