| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4430322 | 306 (1.080) | 8 (0.030) | 3/262 | NT | 2.8% | coding (459/1413 nt) | cycA | D‑alanine/D‑serine/glycine transporter |
| ? | NC_000913 | = 4430408 | 270 (1.010) | coding (545/1413 nt) | cycA | D‑alanine/D‑serine/glycine transporter | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TTTCACCGGCTGGACTTACTGGTTCTGCTGGGTTGTAACCGGTATGGCAGACGTGGTGGCGATCACGGCTTATGCTCAGTTCTGGTTCCCCGATCTCTCCGACTGGGTCGCCTCGCTGGCGGTGATAGTGCTGCTGCTGACGCTCAATCTCGCCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4430166‑4430322‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccaccATGACCAGGCCGACGACAATCAGCGACACAATGGCGACGATTTTGATCATCGCAAACCAGAACTCCATCTCACCGAACATTTTCACGGTGGCGAGATTGAGCGTCAGCAGCAGCACTATCACCGCCAGCGAGGCGACCCAGTCGGAGAG < NC_000913/4430408‑4430260 TTTCACCGGCTGGACTTACTGGTTCTGCTGGGTTGTAACCGGTATGGCAGACGTGGTGGCGATCACGGCTTATGCTCAGTTCTGGTTCCCCGATCTCTCCGACTGGGTCGCCTCGCTGGCGGTGATAGTGCTGCTGCTGACGCTCAATCT > 1:1889389/1‑150 TTCACCGGCTGGACTTACTGGTTCTGCTGGGTTGTAACCGGTATGGCAGACGTGGTGGCGATCACGGCTTATGCTCAGTTCTGGTTCCCCGATCTCTCCGACTGGGTCGCCTCGCTGGCGGTGATAGTGCTGCTGCTGACGCTCAATCTC < 2:4160892/150‑1 TTCACCGGCTGGACTTACTGGTTCTGCTGGGTTGTAACCGGTATGGCAGACGTGGTGGCGATCACGGCTTATGCTCAGTTCTGGTTCCCCGATCTCTCCGACTGGGTCGCCTCGCTGGCGGTGATAGTGCTGCTGCTGACGCTCAATCTC < 2:2658241/150‑1 TTCACCGGCTGGACTTACTGGTTCTGCTGGGTTGTAACCGGTATGGCAGACGTGGTGGCGATCACGGCTTATGCTCAGTTCTGGTTCCCCGATCTCTCCGACTGGGTCGCCTCGCTGGCGGTGATAGTGCTGCTGCTGACGCTCAATCTC < 1:4634302/150‑1 TTCACCGGCTGGACTTACTGGTTCTGCTGGGTTGTAACCGGTATGGCAGACGTGGTGGCGATCACGGCTTATGCTCAGTTCTGGTTCCCCGATCTCTCCGACTGGGTCGCCTCGCTGGCGGTGATAGTGCTGCTGCTGACGCTCAATCTC < 1:4336853/150‑1 TTCACCGGCTGGACTTACTGGTTCTGCTGGGTTGTAACCGGTATGGCAGACGTGGTGGCGATCACGGCTTATGCTCAGTTCTGGTTCCCCGATCTCTCCGACTGGGTCGCCTCGCTGGCGGTGATAGTGCTGCTGCTGACGCTCAATCTC < 1:4094728/150‑1 TCACCGGCTGGACTTACTGGTTCTGCTGGGTTGTAACCGGTATGGCAGACGTGGTGGCGATCACGGCTTATGCTCAGTTCTGGTTCCCCGATCTCTCCGACTGGGTCGCCTCGCTGGCGGTGATAGTGCTGCTGCTGACGCTCAATCTCG > 1:1202747/1‑150 ACCGGCTGGACTTACTGGTTCTGCTGGGTTGTAACCGGTATGGCAGACGTGGTGGCGATCACGGCTTATGCTCAGTTCTGGTTCCCCGATCTCTCCGACTGGGTCGCCTCGCTGGCGGTGATAGTGCTGCTGCTGACGCTCAATCTCGCC > 2:1239369/1‑150 CCGGCTGGACTTACTGGTTCTGCTGGGTTGTAACCGGTATGGCAGACGTGGTGGCGATCACGGCTTATGCTCAGTTCTGGTTCCCCGATCTCTCCGACTGGGTCGCCTCGCTGGCGGTGATAGTGCTGCTGCTGACGCTCAATCTCGCCA > 2:2789203/1‑150 CGGATGGACTTACTGGTTCTGCTGGGTTGTAACCGGTATGGCAGACGTGGTGGCGATCACGGCTTATGCTCAGTTATGGTTCCCCGATCTCACCGACTGGGTCGCCTCGCTGGCGGTGATAGTGCTGCTGCTGACGCTCAATCTCGCCAC > 1:3013066/1‑150 GGCTTGACTTACTGGTTCTGCTGGGTTGTAACCGGTATGGCAGACGTGGTGGCGATCACGGCTTATGCTCAGTTCTGGTTCCCCGATCTCTCCGACTGGGTCGCCTCGCTGGCGGTGATAGTTCTGCTGCTGACGCTCAATCTCGCCACC < 1:3998398/150‑1 CCGGTATGGCAGACGTGGTGGCGATCACGGCTTATGCTCAGTTCTGGTTCCCCGATCTCTCCGACTGGGTCGCCTCGCTGGCGGTGATAGTGCTGCTGCTGACGCTCAATCTCGCCACCATGACCAGGCCGACGACAATCAGCGACACAA > 2:2667188/1‑150 CCGGTATGGCAGACGTGGTGGCGATCACGGCTTATGCTCAGTTCTGGTTCCCCGATCTCTCCGACTGGGTCGCCTCGCTGGCGGTGATAGTGCTGCTGCTGACGCTCAATCTCGCCACCATGACCAGGCCGACGACAATCAGCGACACAA > 2:2666760/1‑150 CCGGTATGGCAGACGTGGTGGCGATCACGGCTTATGCTCAGTTCTGGTTCCCCGATCTCTCCGACTGGGTCGCCTCGCTGGCGGTGATAGTGCTGCTGCTGACGCTCAATCTCGCCACCATGACCAGGCCGACGACAATCAGCGACACAA > 2:1724193/1‑150 ACTGGGTCGCCTCGCTGGCGGTGATAGTGCTGCTGCTGACGCTCAATCTCGCCACCATGACCAGGCCGACGACAATCAGCGACACAATGGCGACGATTTTGATCATCGCAAACCAGAACTCCATCTCACCGAACATTTTCACGGTGGCGA < 1:1293893/150‑1 ACTGGGTCGCCTCGCTGGCGGTGATAGTGCTGCTGCTGACGCTCAATCTCGCCACCATGACCAGGCCGACGACAATCAGCGACACAATGGCGACGATTTTGATCATCGCAAACCAGAACTCCATCTCACCGAACATTTTCACGGTGGCGA < 1:4287536/150‑1 TCGCCTCGCTGGCGGTGATAGTGCTGCTGCTGACGCTCAATCTCGCCACCATGACCAGGCCGACGACAATCAGCGACACAATGGCGACGATTTTGATCATCGCAAACCAGAACTCCATCTCACCGAACATTTTCACGGTGGCGAGATTGA < 1:1724193/150‑1 TCGCCTCGCTGGCGGTGATAGTGCTGCTGCTGACGCTCAATCTCGCCACCATGACCAGGCCGACGACAATCAGCGACACAATGGCGACGATTTTGATCATCGCAAACCAGAACTCCATCTCACCGAACATTTTCACGGTGGCGAGATTGA < 1:2667188/150‑1 TCGCCTCGCTGGCGGTGATAGTGCTGCTGCTGACGCTCAATCTCGCCACCATGACCAGGCCGACGACAATCAGCGACACAATGGCGACGATTTTGATCATCGCAAACCAGAACTCCATCTCACCGAACATTTTCACGGTGGCGAGATTGA < 1:2666760/150‑1 TCGCCACCATGACCAGGCCGACGACAATCAGCGACACAATGGCGACGATTTTGATCATCGCAAACCAGAACTCCATCTCACCGAACATTTTCACGGTGGCGAGATTGAGCGTCAGCAGCAGCACTATCACCGCCAGCGAGGCGACCCAGT > 2:4386620/1‑150 TCGCCACCATGACCAGGCCGACGACAATCAGCGACACAATGGCGACGATTTTGATCATCGCAAACCAGAACTCCATCTCACCGAACATTTTCACGGTGGCGAGATTGAGCGTCAGCAGCAGCACTATCACCGCCAGCGAGGCGACCCAGT > 2:3013066/1‑150 gacaaCATGACCATGCCGACGAAAATAAGCGACACAATGGCGACGATTTTGATAATCGCAAACAAGAACTCCATATCACCGAACATTTTCACGGTGGCGAGATTGAGCGTCAGCATAAGCACTATCACCGCCAGAGAGTCTACCCAGTCG > 2:1301276/6‑150 GCCACCATGACCAGGCCGACGACACTCAGCGACACAATGGCGACGATTTTGATCATCGCAAACCAGAACTCCATCTCACCGAACATTTTCACGGTGGCGAGATTGAGCGTCAGCAGCAGCACTATCACCGCCAGCGAGGCGACCCAGTCG < 2:3435237/150‑1 GCCACCATGACCAGGCCGACGACAATCAGCGACACAATGGCGACGATTTTGATCATCGCAAACCAGAACTCCATCTCACCGAACATTTTCACGGTGGCGAGATTGAGCGTCAGCAGCAGCACTATCACCGCCAGCGAGGCGACCCAGTCG < 1:3889491/150‑1 GCCACCATGACCAGGCCGACGACAATCAGCGACACAATGGCGACGATTTTGATCATCGCAAACCAGAACTCCATCTCACCGAACATTTTCACGGTGGCGAGATTGAGCGTCAGCAGCAGCACTATCACCGCCAGCGAGGCGACCCAGTCG < 2:2315246/150‑1 CCACCATGACCAGGCCGACGACAATCAGCGACACAATGGCGACGATTTTGATCATCGCAAACCAGAACTCCATCTCACCGAACATTTTCACGGTGGCGAGATTGAGCGTCAGCAGCAGCACTATCACCGCCAGCGAGGCGACCCAGTCGG > 2:4044938/1‑150 CCACCATGACCAGGCCGACGACAATCAGCGACACAATGGCGACGATTTTGATCATCGCAAACCAGAACTCCATCTCACCGAACATTTTCACGGTGGCGAGATTGAGCGTCAGCAGCAGCACTATCACCGCCAGCGAGGCGACCCAGTCGG > 1:2131357/1‑150 CCACCATGACCAGGCCGACGACAATCAGCGACACAATGGCGACGATTTTGATCATCGCAAACCAGAACTCCATCTCACCGAACATTTTCACGGGGGCGAGATTGAGCGTCAGCAGCAGCACTATCACCGCCAGCGAGGCGACCCAGTCGG > 2:3952871/1‑150 CCACCATGACCAGGCCGACGACAATCAGCGACACAATGGCGACGATTTTGATCACCGCAAACCAGAACTCCATCTCACCGAACATTTTCACGGTGGCGAGATTGAGCGTCAGCAGCAGCACTATCACCGCCAGCGAGGCGACCCAGTCGG < 1:4453354/150‑1 CACCATGACCAGGCCGACGACAATCAGCGACACAATGGCGACGATTTTGATCATCGCAAACCAGAACTCCATCTCACCGAACATTTTCACGGTGGCGAGATTGAGCGTCAGCAGCAGCACTATCACCGCCAGCGAGGCGACCCAGTCGGA < 1:243792/150‑1 CACCATGACCAGGCCGACGACAATCAGCGACACAATGGCGACGATTTTGATCATCGCAAACCAGAACTCCATCTCACCGAACATTTTCACGGTGGCGAGATTGAGCGTCAGCAGCAGCACTATCACCGCCAGCGAGGCGACCCAGTCGGA > 2:2749311/1‑150 CACCATGACCAGGCCGACGACAATCAGCGACACAATGGCGACGATTTTGATCATCGCAAACCAGAACTCCATCTCACCGAACATTTTCACGGTGGCGAGATTGAGCGTCAGCAGCAGCACTATCACCGCCAGCGAGGCGACCCAGTCGGA < 1:945544/150‑1 CACCATGACCAGGCCGACGACAATCAGCGACACAATGGCGACGATTTTGATCATCGCAAACCAGAACTCCATCTCACCGAACATTTTCACGGTGGCGAGATTGAGCGTCAGCAGCAGCACTATCACCGCCAGCGAGGCGACCCAGTCGGA < 1:4679762/150‑1 CACCATGACCAGGCCGACGACAATCAGCGACACAATGGCGACGATTTTGATCATCGCAAACCAGAACTCCATCTCACCGAACATTTTCACGGTGGCGAGATTGAGCGTCAGCAGCAGCACTATCACCGCCAGCGAGGCGACCCAGTCGGA < 1:3074651/150‑1 CACCATGACCAGGCCGACGACAATCAGCGACACAATGGCGACGATTTTGATCATCGCAAACCAGAACTCCATCTCACCGAACATTTTCACGGTGGCGAGATTGAGCGTCAGCAGCAGCACTATCACCGCCAGCGAGGCGACCCAGTCGGA < 1:3875702/150‑1 CACCATGACCAGGCCGACGACAATCAGCGACACAATGGCGACGATTTTGATCATCGCAAACCAGAACTCCATCTCACCGAACATTTTCACGGTGGCGAGATTGAGCGTCAGCAGCAGCACTATCACCGCCAGCGAGGCGACCCAGTCGGA < 1:3875727/150‑1 CACCACGACCAGGCCGACGACAATCAGCGACACAATGGCGACGATTTTGATCATCGCAAACCAGAACTCCATCTCACCGAACATTTTCACGGTGGCGAGATTGAGCGTCAGCAGCAGCACTATCACCGCCAGCGAGGCGACCCAGTCGGA < 1:4790645/150‑1 ACCATGACCAGGCCGACGACAATCAGCGACACAATGGCGACGATTTTGATCATCGCAAACCAGAACTCCATCTCACCGAACATTTTCACGGTGGCGAGATTGAGCGTCAGCAGCAGCACTATCACCGCCAGCGAGGCGACCCAGTCGGAG < 1:3961810/150‑1 ACCATGACCAGGCCGACGACAATCAGCGACACAATGGCGACGATTTTGATCATCGCAAACCAGAACTCCATCTCACCGAACATTTTCACGGTGGCGAGATTGAGCGTCAGCAGCAGCACTATCACCGCCAGCGAGGCGACCCAGTCGGAG < 2:3780652/150‑1 ACCATGACCAGGCCGACGACAATCAGCGACACAATGGCGACGATTTTGATCATCGCAAACCAGAACTCCATCTCACCGAACATTTTCACGGTGGCGAGATTGAGCGTCAGCAGCAGCACTATCACCGCCAGCGAGGCGACCCAGTCGGAG < 2:3780670/150‑1 CCATGACCAGGCCGACGACAATCAGCGACACAATGGCGACGATTTTGATCATCGCAAACCAGAACTCCATCTCACCGAACATTTTCACGGTGGCGAGATTGAGCGTCAGCAGCAGCACTATCACCGCCAGCGAGGCGACCCAGTCGGAGA < 2:523488/150‑1 CCAGGACCAGGCCGACGACAATCAGCGACACAATGGCGACGATTTTGATCATCGCAAACCAGAACTCCATCTCACCGAACATTTTCACGGTGGCGAGATTGAGCGTCAGCAGCAGCACTATCACCGCCAGCGAGGCGACCCAGTCGGAGA < 1:1911754/150‑1 CATGACCAGGCCGACGACAATCAGCGACACAATGGCGACGATATTGATCATCGCAAACCAGAACTCCATCTCACCGAACATTTTCACGGTGGCGAGATTGAGCGTCAGCAGCAGCACTATCACCGCCAGCGAGGCGACCCAGTCGGAGAG > 1:1723528/1‑150 TTTCACCGGCTGGACTTACTGGTTCTGCTGGGTTGTAACCGGTATGGCAGACGTGGTGGCGATCACGGCTTATGCTCAGTTCTGGTTCCCCGATCTCTCCGACTGGGTCGCCTCGCTGGCGGTGATAGTGCTGCTGCTGACGCTCAATCTCGCCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4430166‑4430322‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccaccATGACCAGGCCGACGACAATCAGCGACACAATGGCGACGATTTTGATCATCGCAAACCAGAACTCCATCTCACCGAACATTTTCACGGTGGCGAGATTGAGCGTCAGCAGCAGCACTATCACCGCCAGCGAGGCGACCCAGTCGGAGAG < NC_000913/4430408‑4430260 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |