Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,239,609 T→G 7.6% intergenic (+64/‑335) alx → / → sstT putative membrane‑bound redox modulator/sodium:serine/threonine symporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,239,6090TG 7.6% 577.7 / 19.5 202intergenic (+64/‑335)alx/sstTputative membrane‑bound redox modulator/sodium:serine/threonine symporter
Reads supporting (aligned to +/- strand):  ref base T (113/62);  new base G (5/11);  total (118/84)
Fisher's exact test for biased strand distribution p-value = 1.37e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 203 total aligned reads displayed.

GCGTGGTGTTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTGGCTTTAT  >  NC_000913/3239463‑3239757
                                                                                                                                                   |                                                                                                                                                    
gCGTGGTGTTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCa                                                                                                                                                   <  2:2930372/150‑1 (MQ=255)
gCGTGGTGTTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCa                                                                                                                                                   <  1:2253844/150‑1 (MQ=255)
  gtggtgTTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAgg                                                                                                                                                 <  2:1607199/150‑1 (MQ=255)
  gtggtgTTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAgg                                                                                                                                                 <  1:431010/150‑1 (MQ=255)
   tggtgTTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAggg                                                                                                                                                <  2:1120060/150‑1 (MQ=255)
     gtgtTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGgag                                                                                                                                              <  2:4429189/150‑1 (MQ=255)
     gtgtTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGgag                                                                                                                                              <  2:4166574/150‑1 (MQ=255)
      tgtTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGgaga                                                                                                                                             >  2:3820572/1‑150 (MQ=255)
       gtTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGagag                                                                                                                                            <  2:3737355/150‑1 (MQ=255)
       gtTTGGCATTCTGGTGATGACGTTTAATATCAACGACTGGTTGAATTATCGGCATTATAAGCAGCGTGGTGGATAATTTTTAATCTGACTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTATTCTCCCTCTCCCATCCAGGGagag                                                                                                                                            >  1:3377209/1‑150 (MQ=255)
        tttGGCATTCTGGTTATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAgg                                                                                                                                           <  1:1459530/150‑1 (MQ=255)
        tttGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAgg                                                                                                                                           <  1:3334037/150‑1 (MQ=255)
        tttGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAgg                                                                                                                                           >  1:3415425/1‑150 (MQ=255)
        tttGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAgg                                                                                                                                           >  1:3957276/1‑150 (MQ=255)
        tttGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTGGAAGGGAGAgg                                                                                                                                           <  1:312617/150‑1 (MQ=255)
        tttGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTGGAAGGGAGAgg                                                                                                                                           <  1:1039901/150‑1 (MQ=255)
        tgtGGCATTCTGGGGATGACGTTTATAATCAACGCCTGGGTGAATTATCGGCATGATCAGCAGCGGGGTGCCTAATTTTTAATCTGCCTAAGCCGTGTCCCCTGTC‑ATTAACATGCGCACCGTGTTCTCCCTCTCCCTTCCAGGGAGAgg                                                                                                                                           >  2:3185820/3‑150 (MQ=255)
          tGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAggga                                                                                                                                         <  1:2076000/150‑2 (MQ=255)
           ggCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAGGGTc                                                                                                                                        >  2:1823356/1‑150 (MQ=255)
              aTTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAGGGTCggg                                                                                                                                     >  2:2734516/1‑150 (MQ=255)
                  ttgTGATGACTTTTATTATCACCGCCTGGGTTAATTTTCGGCATGATAAGCAGGGGGGTGGATATTTTTTAATCTGCCTACGCCGTGTACCCTTTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCCGGGTGAGGGTCGGGGTGa                                                                                                                                 <  1:4718759/148‑1 (MQ=255)
                  tGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGa                                                                                                                                 >  1:3469179/1‑150 (MQ=255)
                  gggTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCGTCCAGGGAGAGGGTCGGGGTGa                                                                                                                                 <  2:2257425/149‑1 (MQ=255)
                    gggcggaCGTGTATGATCAACGCCTGGGTGCATTATCGGCAGGATAAGCCGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑CTTAACATGCGCACCGTTGTCTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAgg                                                                                                                               <  2:4177671/145‑1 (MQ=255)
                     tgatgaCGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAggg                                                                                                                              >  2:2785788/1‑150 (MQ=255)
                          aCGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAAtt                                                                                                                         >  2:1482472/1‑150 (MQ=255)
                           cGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAGGGTc                                                                                                                                        >  2:4597745/1‑134 (MQ=255)
                            gTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAAtttt                                                                                                                       >  2:1001873/1‑150 (MQ=255)
                            gTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAAtttt                                                                                                                       <  2:3531636/150‑1 (MQ=255)
                             tttATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAAttttt                                                                                                                      >  1:3411147/1‑150 (MQ=255)
                              ttattaTCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTc                                                                                                                     >  2:2538332/1‑150 (MQ=255)
                                 ttatCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTACTTTTTCGCa                                                                                                                  >  2:724110/1‑150 (MQ=255)
                                          ccTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTg                                                                                                         >  2:1856581/1‑150 (MQ=255)
                                           cTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTgg                                                                                                        >  1:2510675/1‑150 (MQ=255)
                                           cTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTgg                                                                                                        >  1:1572614/1‑150 (MQ=255)
                                            tGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGc                                                                                                       >  1:4056265/1‑150 (MQ=255)
                                              ggTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCt                                                                                                     >  2:3348793/1‑150 (MQ=255)
                                                    ttttCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTA‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTccc                                                                                               <  2:603724/147‑1 (MQ=255)
                                                    ttATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTccc                                                                                               <  2:1162405/150‑1 (MQ=255)
                                                       tCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTc                                                                                            >  2:1207164/1‑150 (MQ=255)
                                                         ggCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCAc                                                                                          >  1:2450676/1‑150 (MQ=255)
                                                         ggCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCAc                                                                                          >  1:504452/1‑150 (MQ=255)
                                                         ggCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGATTTCTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCAc                                                                                          >  2:3860613/1‑150 (MQ=255)
                                                              gATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTaa                                                                                     >  2:442027/1‑150 (MQ=255)
                                                                     agcGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCtctc                                                                              >  2:610268/1‑150 (MQ=255)
                                                                      gcGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTcc                                                                             >  2:3065794/1‑150 (MQ=255)
                                                                       cGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTccc                                                                            >  2:1408332/1‑150 (MQ=255)
                                                                        ggggTGGATAATTTTTAATCGGCCTAAGCCGTGTACCCGGTC‑ATTAACATGAGCACCGTTTTCTCCCACGCCCTCCCAGGGAGTGGGTCGGGGTGAGGTTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTcccc                                                                           <  2:3942534/150‑1 (MQ=37)
                                                                          ggTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCaa                                                                         >  2:1327057/1‑150 (MQ=255)
                                                                              gATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCCAACgg                                                                     >  1:154944/1‑150 (MQ=255)
                                                                              gATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACgg                                                                     >  1:709323/1‑150 (MQ=255)
                                                                              gATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACgg                                                                     >  1:2725932/1‑150 (MQ=255)
                                                                               aTAATTTTTAATCTGCATACGCGGTGTCCCCTGTA‑TTTACCTTGAGCACGTTTTTGCCCCTCCCCCTTCCGGGTTGTGGTGGGGGGTGTGTGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACggg                                                                    <  1:3119804/150‑1 (MQ=16)
                                                                                 attttttATTCTGACTATGCGGTGTACCCTGTA‑ATTAACTTGCCCACCTTTTTCGCCCTCTCCGTTCCAGGGAGTGGGTGGGGTTGTGGTTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGc                                                                  <  2:4115125/148‑1 (MQ=21)
                                                                                  aTTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCg                                                                 >  2:172317/1‑150 (MQ=255)
                                                                                     tttAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGCTGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAgg                                                              >  1:4664046/1‑150 (MQ=255)
                                                                                     tttAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAgg                                                              >  1:2771572/1‑150 (MQ=255)
                                                                                     tttAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCACCTCACCCTAACCCTCTCCCCAAACGGGGCGAgg                                                              >  1:769231/1‑150 (MQ=255)
                                                                                       tattCTGCCTAAGCGTTGTACCCTGTA‑ATTAACTTTCGACCCGTTTTCGCCCTCGCCCTTCCTGGGATCGGGTGGGGGTGTGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAgggg                                                            <  2:4316223/147‑1 (MQ=18)
                                                                                        aaTCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGa                                                           >  2:2864327/1‑150 (MQ=255)
                                                                                        aaTCGGCCTACGCGGTG‑ACCCTTTAAATTAACTTGCGCAAGTTTTTCCCCCTCTCCGTGCCGGGGTTTGGGGGGGGGTGTGGGAAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGa                                                           <  1:2939677/150‑1 (MQ=12)
                                                                                          tcggCCTACGCCGTGTCCCATTTA‑ATAAACAGGCCCCCTTTTTCCCCCCCCCCCCTCCCGGGGTGTGGGGGGGGGTGTGGGACATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACt                                                         <  1:1823356/147‑1 (MQ=9)
                                                                                            tGCCTAAGCCGTTTACCCGGCC‑ATTAACATTAGCACGGTTTACACCCTCTCCCTTCCCGGTAGAGGGTCGGGGGGTGGTTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGa                                                       <  1:1975890/150‑1 (MQ=21)
                                                                                              ccTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGAcc                                                     >  1:2318501/1‑150 (MQ=255)
                                                                                              ccTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGAcc                                                     >  1:3821262/1‑150 (MQ=255)
                                                                                              catacgCCGTGAACCCTGTA‑TTTAACTTGCGCACGGTTTACCCCCCCCCCCTTCCGGGGTGTGGGGGGGGGTGCGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGAcc                                                     <  1:3160631/145‑1 (MQ=18)
                                                                                                tAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGa                                                   >  1:2108636/1‑150 (MQ=255)
                                                                                                  aGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGt                                                 >  1:3634361/1‑150 (MQ=255)
                                                                                                   cccgttcaCCCTCTA‑ATAAACATGCCCACGTTTTCCCCCCCCCCCCCCCCGGGGTGTGGGGCGGGGTGGGGGAAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTc                                                <  1:1277783/143‑1 (MQ=12)
                                                                                                       tgtACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCttt                                            >  1:4781196/1‑150 (MQ=255)
                                                                                                          ccccTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCCGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCtttttt                                         <  2:2395569/149‑1 (MQ=255)
                                                                                                            ccTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGa                                       >  2:3463941/1‑150 (MQ=255)
                                                                                                             cTGTC‑ATTAACATGTGCACCGTTTTCTCCCTCTCCCTTCCCGGTAGTGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGAt                                      <  2:4336122/150‑1 (MQ=255)
                                                                                                              ctttaaTTAAACTGAGCACGTTTTACACCCTCCCCCTTCCCGGGTTTGGGTGGGGGTTAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGAt                                      <  2:4184370/145‑1 (MQ=21)
                                                                                                                   aTTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGAtgttgt                                 >  2:2135282/1‑150 (MQ=255)
                                                                                                                    ttAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGtc                                >  1:2808264/1‑150 (MQ=255)
                                                                                                                        cATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGGGTCCTTTTTTGATGTTGtcatca                            >  2:4578999/1‑150 (MQ=255)
                                                                                                                           gAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTc                         <  2:741338/150‑1 (MQ=255)
                                                                                                                             gccctgTTTCCTCCCTCTCCCTTCCGGGGTGTGGGTGGGGTTGTGGGAAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTg                       <  2:1408671/145‑1 (MQ=25)
                                                                                                                             gaccggTTTTCCCCCTCGCCCTCCCCGGGTGTGGGTGGGGGTGTGGTTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTg                       <  2:2557086/145‑1 (MQ=25)
                                                                                                                             ccACGGTTTACCCCCCCCCCCTTCCGGGGCTCGGGTGGGGGTGTGGGACATTTTTCGCACCGATGCTGGCCTGGTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTg                       <  1:2617808/149‑1 (MQ=25)
                                                                                                                               ccggTTTGCGCCCGCTCCCTTCCGGGGTGTGGGTGGGGGTGGGGGAAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGa                     <  2:492232/147‑1 (MQ=25)
                                                                                                                               aCCGTTTTCTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTggt                     >  1:3614126/1‑149 (MQ=255)
                                                                                                                                  gTTTTCTCCCTCTCCCTTCCCGGGAGAGGGTCGGGGTGTGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGATGc                  <  2:4648304/150‑1 (MQ=255)
                                                                                                                                       ctccctctccctTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTACCCACACCCTAAACCACACCCCAAAAGGGGCGAGGGGACTGAACGAGTCCTTTTTTGATTTTGTCATCAGTCTGGAAGCCCCAc             >  1:4477376/1‑150 (MQ=255)
                                                                                                                                          cctctccctTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGtt          >  1:2705180/1‑150 (MQ=255)
                                                                                                                                          cctctccctTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGtt          >  2:264500/1‑150 (MQ=255)
                                                                                                                                          cctctccctGGAAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGtt          >  1:3008086/1‑150 (MQ=255)
                                                                                                                                          cctctccctGGAAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGtt          >  2:266482/1‑150 (MQ=255)
                                                                                                                                          cctctccctGGAAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGGTGTCATCAGTCTGGAAGCCGCACGtt          >  1:3008095/1‑150 (MQ=255)
                                                                                                                                           ctctccctTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTg         >  1:1523315/1‑150 (MQ=255)
                                                                                                                                           ctctccctTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCAAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCCAGTCCTTTTTTGATGTTGTAATCAGTCTGGAAGCCGCACGGTg         >  1:4555873/1‑150 (MQ=255)
                                                                                                                                           ctctccctTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCAAACCCTCACCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTg         >  1:2179733/1‑150 (MQ=255)
                                                                                                                                           ctctccctTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCACACCCAAACCCACTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATAAGTCAGGAAGCCGCACGTTg         >  1:3754190/1‑150 (MQ=255)
                                                                                                                                            cccccctTCCTGTTAGTGGGTGGGGTTTTGGGAAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTgg        <  1:1890971/147‑1 (MQ=37)
                                                                                                                                             ctccctTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTGGc       >  2:3922486/1‑150 (MQ=255)
                                                                                                                                             ctccctTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCGCACCCAAACCCTCACCCCAAACGGGGCGGGGGGACTGACCGAGTCCTTTTTTGATGTTGTCAGCAGTCTGGAAGCCCCACCTTGGc       >  2:2156429/1‑150 (MQ=255)
                                                                                                                                               ccctTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTGGCtt     >  2:3494804/1‑150 (MQ=255)
                                                                                                                                                cctTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGTTGTTGTCATCAGTCTGGAAGCCGCACGTTGGCttt    >  1:633883/1‑150 (MQ=255)
                                                                                                                                                cctTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTGGCttt    >  1:3515294/1‑150 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
GCGTGGTGTTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTC‑ATTAACATGAGCACCGTTTTCTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTGGCTTTAT  >  NC_000913/3239463‑3239757

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑