| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1897271 = | 111 (0.940) | 6 (0.050) | 3/260 | NT | 5.5% | coding (340/1365 nt) | sdaA | L‑serine dehydratase 1 |
| ? | NC_000913 | 1897308 = | 102 (0.930) | coding (377/1365 nt) | sdaA | L‑serine dehydratase 1 | |||||
TTACTTCGTTGGCAGCATCCTGACCAAAGTGTTCTTCATCGACGATAAAACCGCCGCCGATGGAATAATAAGTTTTGCTGTAGACGACTTCATCGCCGTTATAGGCGTGGATTTGCATACCGTTTTCATGCAGCGGCAGGTTGCCGTTATGAAAACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1897427‑1897271‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgaaaacgGTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCAC > NC_000913/1897308‑1897455 TTACTTCGTTGGCAGCATCCTGACCAAAGTGTTCTTCATCGACGATAAAACCGCCGCCGATGGAATAATAAGTTTTGCTGTATACGACTTCATCGCCGTTATAGGCGTGGATTTGCATACCGTTTTCATGCAGCGGCAGGTTGCCGTTAT < 2:1057041/150‑1 TACTTTGTTGGCAGCATCCTGACCAAAGTGTTCTTCATCGACGATAAAACCGCCGCCGATGGAATAATAAGTTTTGCTGTAGACGACTTCATCGCCGTTATAGGCGTGGATTTGCATACCGTTTTCATGCAGCGGCAGGTTGCCGTTATG > 2:606973/1‑150 TTCGTTGGCAGCATCCTGACCAAAGTGTTCTTCATCGACGATAAAACCGCCGCCGATGGAATAATAAGTTTTGCTGTAGACGACTTCATCGCCGTTATAGGCGTGGATTTGCATACCGTTTTCATGCAGCGGCAGGTTGCCGTTATGAAA > 1:1458570/1‑150 TCGTTGGCAGCATCCTGACCAAAGTGTTCTTCATCGACGATAAAACCGCCGCCGATGGAATAATAAGTTTTGCTGTAGACGACTTCATCGCCGTTATAGGCGTGGATTTGCATACCGTTTTCATGCAGCGGCAGGTTGCCGTTATGAAAA > 2:1850394/1‑150 gtaGGCAGCATCCTCCCCAAAGTGTTCATCATCGACGATAAAACCCACGACGCTGGAAAAATAAGTTATGCTGTAGACGACATCATCGCCGTTATAGGCGTGGATTTGCATACCGTTTTCATGCAGCGGCAGGTTGCCGTTATGAAAACG < 2:247437/147‑1 GTTGGCAGCATCCTGACCAAAGTGTTCTTCATCGACGATAAAACCGCCGCCGATGGAATAATAAGTTTTGCTGTAGACGACTTCATCGCCGTTATAGGCGTGGATTTGCATACCGTTTTCATGCAGCGGCAGGTTGCCGTTATGAAAACG < 1:755077/150‑1 GGCAGCATCCTGACCAAAGTGTTCTTCATCGACGATAAAACCGCCGCCGAGGGAATAATAAGTTTTGCTGTAGCCGACTTCATCGCCGTTATAGGCGTGGATTTGCATACCGTTTTCATGCAGCGCAAGGTTGCCGTTATGAAAAagcct > 1:165131/1‑145 GATTTGCATACCGTTTTCATGCAGCGGCAGGTTGCCGTTATGAAAACGGTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCCTCGGCGGCGGTTTTATCGTCGATGAAGCACACTTTGGTCAGG > 1:1762958/1‑150 aaACCGTTTTCATGCAGCGGCAGGTTGCCGTTATGAAAACGGTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTATACAGCAAAACTTATTATTCAATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCAGC > 2:1672995/3‑150 ATACCGTTTTCATGCAGCGGCAGGTTGCCGTTATGAAAACGGTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTcc > 2:903106/1‑148 CCGTTTTCATGCAGCGGCAGGTTGCCGTTATGAAAACGGTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGATCACTTTGGGCAGGATGCTGCCAc > 2:708823/1‑149 CCGTTTTCATGCAGCGGCAGGTTGCCGTTATGAAAACGGTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAA > 1:243923/1‑150 CCGTTTTCATGCAGCGGCAGGTTGCCGTTATGAAAACGGTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAA > 1:909923/1‑150 TGAAAACGGTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAActa > 1:1174170/1‑147 TGAAAACGGTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACGTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACAATTTGGTCAGGAAGCTGCCAACGAAGTAAGCGTGCCGGATCCGTTCAAATC > 2:1673781/1‑150 AAAACGGTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTG > 1:493260/1‑150 AAACGGTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGC < 1:715781/150‑1 ACGGTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCA > 2:1639474/1‑150 CGGTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCAC < 1:9218/150‑1 CGGTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCAC < 2:198826/150‑1 TTACTTCGTTGGCAGCATCCTGACCAAAGTGTTCTTCATCGACGATAAAACCGCCGCCGATGGAATAATAAGTTTTGCTGTAGACGACTTCATCGCCGTTATAGGCGTGGATTTGCATACCGTTTTCATGCAGCGGCAGGTTGCCGTTATGAAAACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1897427‑1897271‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgaaaacgGTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCAC > NC_000913/1897308‑1897455 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |