New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4531472	123 (1.040)	4 (0.040)	3/268	NT	3.2%	coding (180/1122 nt)	sgcX	putative endoglucanase with Zn‑dependent exopeptidase domain
	?	NC_000913	= 4531502	120 (1.060)					coding (150/1122 nt)	sgcX	putative endoglucanase with Zn‑dependent exopeptidase domain
Rejected: Frequency below/above cutoff threshold.

ACTGGCCCTTTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4531320‑4531472 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcgc‑GCGCTACGGTAGTGATAAACCCGATGCGCTGCGACTGATGATTTTTGCGCATATGGATGAAGTCGGTTTTATGGTGCGCAAAATAGAGCCGTCTGGATTTTTACGCTTTGAACGCGTAGGCGGTCCTGCGCAGGTCACTATGGCTGGTT  <  NC_000913/4531502‑4531354                                                                                                                                                                                                                                                                                                                 ACTGGCCCTTTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCTGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGGAAAAATCATCAGT                                                                                                                                                           <  2:1811415/150‑1  CTGGCCCTTTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTC                                                                                                                                                          >  2:1474629/1‑150                                    ACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCTACGGTAGTGATAAACCCGATGCGCTG                                                                                                                        <  2:590630/150‑1                                       AGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGC‑GCGCTACGGTAGTGATAAACCCGATGCGCTGCGAC                                                                                                                    <  1:1285466/150‑1                                       AGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGC‑GCGCTACGGTAGTGATAAACCCGATGCGCTGCGAC                                                                                                                    <  2:1519352/150‑1                                        GCCATAGTGACCTGCGCAGGACCGCCTACGCGTTAAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATACGCAAAAATCATCAGTCGC‑GCGCTACGGTAGTGATAAACCCGATGCGCTGCGACT                                                                                                                   <  2:865959/150‑1                                                                                                                                                     GTCGC‑GCGCTACGGTAGTGATAAACCCGATGCGCTGCGACTGATGATTTTTGCGCATATGGATGAAGTCGGTTTTATGGTGCGCAAAATAGAGCCGTCTGGATTTTTACGCTTTGAACGCGTAGGCGGTCCTGCGCAGGTCACTATGGCT      >  1:1798154/1‑150                                                                                                                                                       CGC‑GCGCTACGGTAGTGATAAACCCGATGCGCTGCGACTGATGATTTTTGCGCATATGGATGAAGTCGGTTTTATGGTGCGCAAAATAGAGCCGTCTGGATTTTTACGCTTTGAACGCGTAGGCGGTCCTGCGCAGGTCACTATGGCTGG    <  1:636602/150‑1                                                                                                                                                       CGC‑GCGCTACGGTAGTGATAAACCCGATGCGCTGCGACTGATGATTTTTGCGCATATGGATGAAGTCGGTTTTATGGTGCGCAAAATAGAGCCGTCTGGATTTTTACGCTTTGAACGCGTAGGCGGTCCTGCGCAGGTCACTATGGCTGG    >  2:1419672/1‑150                                                                                                                                                        GC‑GCGCTACGGTAGTGATAAACCCGATGCGCTGCGACTGATGATTTTTGCGCATATGGATGAAGTCGGTTTTATGGTGCGCAAAATAGAGCCGTCTGGATTTTTACGCTTTGAACGCGTAGGCGGTCCTGCGCAGGTCACTATGGCTGGT   <  2:657412/150‑1                                                                                                                                                         C‑GCGTTAAGGTAGTGATAAACCCGATGCGCTGCGACTGATGATTTTTGCGCATATGGATTAAGTGGGTTTTATGGTGCGCAAAATAGAGGCGTCTGGATTTTTACGCTTTGAACGCGTAGGCGGTCCTGCGCAGGTCACTATGGCTGGTT  <  1:911202/150‑1                                                                                                                                                         C‑GCGCTACGGTAGTGATAAACCCGATGCGCTGCGACTGATGATTTTTGCGCATATGGATGAAGTCGGTTTTATGGTGCGCAAAATAGAGCCGTCTGGATTTTTACGCTTTGAACGCGTAGGCGGTCCTGCGCAGGTCACTATGGCTGGTT  <  1:199646/150‑1                                                                                                                                                         C‑GCGCTACGGTAGTGATAAACCCGATGCGCTGCGACTGATGATTTTTGCGCATATGGATGAAGTCGGTTTTATGGTGCGCAAAATAGAGCCGTCTGGATTTTTACGCTTTGAACGCGTAGGCGGTCCTGCGCAGGTCACTATGGCTGGTT  <  1:708297/150‑1                                                                                                                                                         C‑GCGCTACGGTAGTGATAAACCCGATGCGCTGCGACTGATGATTTTTGCGCATATGGATGAAGTCGGTTTTATGGTGCGCAAAATAGAGCCGTCTGGATTTTTACGCTTTGAACGCGTAGGCGGTCCTGCGCAGGTCACTATGGCTGGTT  <  2:253968/150‑1                                                                                                                                                                                                                                                                                                                 ACTGGCCCTTTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4531320‑4531472 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcgc‑GCGCTACGGTAGTGATAAACCCGATGCGCTGCGACTGATGATTTTTGCGCATATGGATGAAGTCGGTTTTATGGTGCGCAAAATAGAGCCGTCTGGATTTTTACGCTTTGAACGCGTAGGCGGTCCTGCGCAGGTCACTATGGCTGGTT  <  NC_000913/4531502‑4531354

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.