New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4635629	137 (1.160)	5 (0.040)	4/266	NT	3.9%	coding (109/474 nt)	creA	putative periplasmic protein
	?	NC_000913	= 4635693	116 (1.030)					coding (173/474 nt)	creA	putative periplasmic protein
Rejected: Frequency below/above cutoff threshold.

GTGACGAACTAATTGCTCGTGTAATAGATAAAAATGGTAACAATATGAAATACAAGCATTTGATCCTGTCTTTAAGCCTGATAATGCTGGGGCCATTGGCTCATGCAGAAGAGATTGGTTCGGTCGACACCGTATTTAAAATGATCGGCCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4635477‑4635629 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccggCTCACATAACAGGTGACATTTTTCACATCGGGATCATCAAAGGCTTCCACAACAATTTTGTGATCCGGGCCGATCATTTTAAATACGGTGTCGACCGAACCAATCTCTTCTGCATGAGCCAATGGCCCCAGCATTATCAGGCTTAA  <  NC_000913/4635693‑4635548                                                                                                                                                                                                                                                                                                             GTGACGAACTAATTGCTCGTGTAATAGATAAAAATGGTAACAATATGAAATACAAGCATTTGATCCTGTCTTTAAGCCTGATAATGCTGGGGCCATTGGCTCATGCAGAAGAGATTGGTTCGGTCGACACCGTATTTAAAATGATCGGCC                                                                                                                                                       >  1:1433097/1‑150  TGACGAACTAATTGCTCGTGTAATAGATAAAAATGGTAACAATATGAAATACAAGCATTTGATACTGTCTTTAAGCCTGATAATGCTGGGGCCATTGGCTCATGCAGAAGAGATTGGTTCGGTCGACACCGTATTTAAAATGATCGGCCC                                                                                                                                                      >  1:1632111/1‑150                                                                     TCTTTAAGCCTTTTAATGCTGGGGCCATTGGCTCATGCAGAAGAGATTGGTTCGGTCGACACCGTATTTAAATTGATCGTCCCGGCTCACATAACAGGTGACATTTTTCACTTCGTGATCATCAAAGGCTTCCACAACATTTTTGTGATC                                                                                   <  1:1794337/150‑1                                                                          AAGCCTGATAATGCTGGGGGCATTGGCTCATGCAGAAGAGATTGGTTCGGTCGACACCGTATTTAAAATGATCGGCCCGGCTCACATAACAGGTGACATTTTTCACATCGGGATCATCAAAGGCTTCCACAACAATTTTGTGATCCGGGC                                                                              <  1:1452396/150‑1                                                                            tCCTGATGATGATGTGGCCATTGGCTCATGCAGAAGAGATTGGTTCGGTCGACACCGTATTTAAAATGATCGGCCCGGCTCACATAACAGGTGACATTTTTCACATCGGGATCATCAAAGGCTTCCACAACAATTTTGTGATCCGGGCCG                                                                            <  2:1759236/149‑1                                                                            GCCTGATGAGTCTGGGGCCATTGGCTCATGCAGAAGAGATTGGTTCGGTCGACACCGTATTTAAAATGATCGGCCCGGCTCACATAACATGTGACATTTTTCACATCGGGATCATCAAAGGCTTCCACAACAATTTTTTGATCCGGGCCG                                                                            <  2:1767102/150‑1                                                                                              CATTGGCTCATGCAGAAGAGATTGGTTCGGTCGACACCGTATTTAAAATGATCGGCCCGGCTCACATAACAGGTGACATTTTTCACATCGGGATCATCAAAGGCTTCCACAACAATTTTGTGATCCGGGCCGATCATTTTAAATACGGTG                                                          <  2:948426/150‑1                                                                                                                                                    GCCCGGCTCACATAACAGGTGACATTTTTCACATCGGGATCATCAAAGGCTTCCACAACAATTTTGTGATCCGGGCCGATCATTTTAAATACGGTGTCGACCGAACCAATCTCTTCTGCATGAGCCAATGGCCCCAGCATTATCAGGCTT    >  1:1195100/1‑150                                                                                                                                                    GCCCGGCTCACATAACAGGTGACATTTTTCACATCGGGATCATCAAAGGCTTCCACAACAATTTTGTGATCCGGGCCGATCATTTTAAATACGGTGTCGACCGAACCAATCTCTTCTGCATGAGCCAATGGCCCCAGCATTATCAGGCTT    >  1:566816/1‑150                                                                                                                                                     CCCGGCTCACATAACAGGTGACATTTTTCACATCGGGATCATCAAAGGCTTCCACAACAATTTTGTGATCCGGGCCGATCATTTTAAATACGGTGTCGACCGAACCAATCTCTTCTGCATGAGCCAATGGCCCCAGCATTATCAGGCTTA   >  1:1138240/1‑150                                                                                                                                                      CCGGCTCACATAACATGTGACATTTTTCACATCGGGATCATCAAAGGCTTCCACAACAATTTTGTGATCCGGGCCGATCATTTTAAATACGGTGTCGACCGAACCAATCTCTTCTGCATGAGCCAATGGCCCCAGCATTATCAGGCTTAA  <  1:1259734/150‑1                                                                                                                                                                                                                                                                                                             GTGACGAACTAATTGCTCGTGTAATAGATAAAAATGGTAACAATATGAAATACAAGCATTTGATCCTGTCTTTAAGCCTGATAATGCTGGGGCCATTGGCTCATGCAGAAGAGATTGGTTCGGTCGACACCGTATTTAAAATGATCGGCCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4635477‑4635629 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccggCTCACATAACAGGTGACATTTTTCACATCGGGATCATCAAAGGCTTCCACAACAATTTTGTGATCCGGGCCGATCATTTTAAATACGGTGTCGACCGAACCAATCTCTTCTGCATGAGCCAATGGCCCCAGCATTATCAGGCTTAA  <  NC_000913/4635693‑4635548

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.