New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3277819 =NA (NA)6 (0.050) 6/262 NT NA noncoding (1/29 nt) REP238 (repetitive extragenic palindromic) element; contains 1 REP sequences REP238 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 3277844 = NA (NA)noncoding (26/29 nt) REP238 (repetitive extragenic palindromic) element; contains 1 REP sequences REP238 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 170 total aligned reads displayed.

AACGATGAAAACACTCTGCGCACCTACGGTAAAAAAACAGATGCCTATACCGTATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGATACGTTGAGTATCAATGATC  >  NC_000913/3277670‑3277967
                                                                                                                                                      |                                                                                                                                                    
aaCGATGAAAACACTCTGCGCACCTACGGTAAAAAAACAGATGCCTATACCGTATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCccg                                                                                                                                                      <  2:51170/150‑1 (MQ=255)
  cGATGAAAACACTATGCGCACCTACGGTAAAAAAACAGATGCCTATACCGTATTCAGAAAAATGTTAAAAAGAGGACATCCTCCAGCCGACTGGCAAACCCTCACCCCAGAAACAGAAGAAACCCATTGATTGTGTTCACAATGCccgaa                                                                                                                                                    >  2:1768108/1‑148 (MQ=255)
   gATGAAAACACTCTGCGCACCTACGGTAAAAAAACAGATGCCTATACCGTATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCccgccg                                                                                                                                                   <  2:689117/150‑1 (MQ=255)
   gATGAAAACACTCTGCGCACCTACGGTAAAAAAACAGATGCCTATACCGTATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCccgccg                                                                                                                                                   >  2:694992/1‑150 (MQ=255)
    aTGAAAACACTCTGCGCACCTACGGTAAAAAAACAGATGCCTATACCGTATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGa                                                                                                                                                  <  1:577340/150‑1 (MQ=255)
     tGAAAACACTCTGCGCACCTACGGTAAAAAAACAGATGCCTATACCGTATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGCAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGaa                                                                                                                                                 >  1:1026526/1‑150 (MQ=255)
      gAAAACACTCTGCGCACCTACGGTAAAAAAACAGATGCCTATACCGTATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAAc                                                                                                                                                >  2:439419/1‑150 (MQ=255)
       aaaaCACTCTGCGCACCTACGGTAAAAAAACAGATGCCTATACCGTATTCAGCAAAATGTTAAAAAGCGGACATCCTCCTGCCGACTGGGAACCCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGCACg                                                                                                                                               >  2:125765/1‑150 (MQ=255)
       aaaaCACTCTGCGCACCTACGGTAAAAAAACAGATGCCTATACCGTATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGTGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACg                                                                                                                                               <  1:166595/150‑1 (MQ=255)
       aaaaCACTCTGCGCACCTACGGTAAAAAAACAGATGCCTATACCGTATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACg                                                                                                                                               >  2:1683099/1‑150 (MQ=255)
       aaaaCACTCTGCGCACCTACGGTAAAAAAACAGATGCCTATACCGTATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACg                                                                                                                                               >  2:1893199/1‑150 (MQ=255)
       aaaaCACTCTGCGCACCTACGGTAAAAAAACAGATGCCTATACCGTATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACg                                                                                                                                               >  1:892827/1‑150 (MQ=255)
       aaaaCACTCTGCGCACCTACGGTAAAAAAACAGATGCCTATACCGAATTCAGCAAAATGTAAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCAACCGAGAAACAGAACAAACCCATTGATGGTGTTCACAATACCCGCCGAACg                                                                                                                                               >  1:1970972/1‑150 (MQ=255)
        aaaCACTCTGCGCACCTACGGTAAAAAAACAGATGCCTATACCGTATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCTAACACGAAAAACAGCACGAACCAAATTATGGTGTTGACAAAGACCCGCCaaagca                                                                                                                                              >  2:635220/1‑147 (MQ=255)
             ctctGCGCACCTACGGTAAAAAAACAGATGCCTATACCGTATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCg                                                                                                                                         <  1:821303/150‑1 (MQ=255)
              tctGCGCACCTACGGTAAAAAAACAGATGCCTATACCGTATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGACGACTGGGAAAACCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCgt                                                                                                                                        >  1:242773/1‑150 (MQ=255)
               ctGCGCACCTACGGTAAAAAAACAGATGCCTATACCGTATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCgtg                                                                                                                                       >  1:650627/1‑150 (MQ=255)
                 gcgcACCTACGGTAAAAAAACAGATGCCTATACCGTATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGtt                                                                                                                                     <  1:1470111/150‑1 (MQ=255)
                  cgcACCTACTGTAAAAAAACAGATGCCTATACCGGATTCAGCAAAATGTTAAAAAGAGGTCATGCTGCTTGCGACTGGGTAACCCTCACCCTAGAAAAATAAGAAACCCATTGATGGGGTTCACAATTCCCGCCGAACGCATTCGTGTTg                                                                                                                                    <  1:1410510/150‑1 (MQ=255)
                        tACGGTAAAAAAACAGATGCCTATACCGTATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAGCAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGc                                                                                                                              <  2:1893233/150‑1 (MQ=255)
                          cGGTAAAAAAACAGATGCCTATACCGTATTCAGCAAAATGTTAAAAAGAGGCCATCCTCCTGACGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCgg                                                                                                                            <  2:845867/150‑1 (MQ=255)
                           ggTAAAAAAACAGATGCCTATACCGTATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCggg                                                                                                                           <  1:1143738/150‑1 (MQ=255)
                            gTAAAAAAACAGATGCCTATACCGTATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGc                                                                                                                          >  2:1785472/1‑150 (MQ=255)
                             tAAAAAAACAGATGCCTATACCGTATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCAt                                                                                                                                            >  2:1490452/1‑131 (MQ=255)
                             tAAAAAAACAGATGCCTATACCGTATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCa                                                                                                                         <  1:155929/150‑1 (MQ=255)
                              attgatactcaacgtatcgacatgttcattgttgatgaaggcattcctgcggatagcctggaaggactgcgaaaggctggggttgaagtgattctggtcggggagtgagaaaggatgcccGCCGAACGCATTCGTGTTGACCAGCGGGCa                                                                                                                         >  1:365287‑M1/121‑150 (MQ=255)
                               aaaaaaCAGATGCCTATACCGTATTCACCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATAGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATc                                                                                                                       >  2:2017393/1‑150 (MQ=255)
                                tgatactcaacgtatcgacatgatgattgttgatgtaggcattcctgcggatagcctggaaggactgcgaaaggctggggttgaagtgattctggtcggggagtgagaaaggatgcccGCCGAACGCATTCGTGTTGACCAGCGGGCATc                                                                                                                       >  2:1379088‑M1/119‑150 (MQ=255)
                                    aCAGATGCCTATACCGTATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTtc                                                                                                                  <  2:1708046/150‑1 (MQ=255)
                                    aCAGATGCCTATACCGTATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTtc                                                                                                                  <  1:731785/150‑1 (MQ=255)
                                    aCAGATGCCTATACCGTATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTGCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTtc                                                                                                                  <  2:1564577/150‑1 (MQ=255)
                                     ctcaacgtatcgacatgatcattgttgatgaaggcattcctgcggatagcctggaaggactgcgaaaggctggggttgaagtgattctggtcggggagtgagaaaggatgcccGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTtc                                                                                                                  >  1:1316563‑M1/114‑150 (MQ=255)
                                      aGATGCCTATACCGTATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTTATGGTGTTCACAATGGCCGGCGAACGCATTCGTGTTGACCAGCGGGCATCCTTtctc                                                                                                                <  2:868143/150‑1 (MQ=255)
                                       caacgtatcgacatgatcattgttgattaaggcattcctgcggatagcctggaatgactgcgaaaggctggggttgaagtgattctggtcggggagtgagaaaggatgcccGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTtctc                                                                                                                >  1:854250‑M1/112‑150 (MQ=255)
                                           ccTATACCGTATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTcc                                                                                                           >  1:1631212/1‑150 (MQ=255)
                                           ccTATACCGTATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTcc                                                                                                           >  1:669256/1‑150 (MQ=255)
                                            cTATACCGTATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTccc                                                                                                          >  2:1858126/1‑150 (MQ=255)
                                              ataCCGTATTCAGCAAAATGTTAGAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCg                                                                                                        <  1:1134273/150‑1 (MQ=255)
                                                 ccGTATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGAcc                                                                                                     <  2:1530839/150‑1 (MQ=255)
                                                    tATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGAc                                                                                                      >  2:1575506/1‑146 (MQ=255)
                                                        cAGCAAAATGTTAAAAAGAGGACATCATCATGCCGACTGGGAAACCCTCACACGAGAAAAAGAAGAAAAACATTGATGGTGTTCACAAAGCCCGCCGACCGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTACCCGACCAGAATCa                                                                                              >  1:1945071/1‑150 (MQ=255)
                                                          gCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACACTCACCCTAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACt                                                                                            <  1:1718970/150‑1 (MQ=255)
                                                           cAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCGGCGGGCATCCTTTCGCACTCCCCGCCCAGAATCACtt                                                                                           >  1:258445/1‑150 (MQ=255)
                                                            aaaaTGTTAAAAAGAGGACTTCCTCCTGCCGACTGGGAAACCCTCAGCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTGTCACTCCCCGACCAGAATCACTTc                                                                                          <  2:874041/150‑1 (MQ=255)
                                                            aaaaTGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTc                                                                                          <  1:343496/150‑1 (MQ=255)
                                                                tGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAAcc                                                                                      <  1:1372280/150‑1 (MQ=255)
                                                                tGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCATCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAAcc                                                                                      <  1:1379859/150‑1 (MQ=255)
                                                                 gTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGCAACCCATTGATGGTGTTCACAATGCCCGCCGACCGCATTCGTGTTGACCAGCGGGCATCCTTTCTCCCTCCCCGACCAGAATCACTTCCAccc                                                                                     >  2:318615/1‑150 (MQ=255)
                                                                  ttAAAAAGAGGACATCCTCCTGCCGACTGTGAAACGCTCACGCGAGAAACAGAAGAAACCCATTGATGTTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCTGGCATCCTTTCTCTCTCCGCGACCTGAATCACTTCAAcccc                                                                                    <  2:1970972/150‑1 (MQ=255)
                                                                   tAAAAAGAGTACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAGCAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCAGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCa                                                                                   <  1:596037/150‑1 (MQ=255)
                                                                   tAAAAAGAGGACATCCTCCTGCCGCCTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACACTGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATGCTTTCTCACTCCCCGCCCAGAATCACTTCACccccc                                                                                   >  1:587952/1‑149 (MQ=255)
                                                                   tAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCa                                                                                   >  1:535035/1‑150 (MQ=255)
                                                                    aaaaaGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCACCCCCAg                                                                                  >  2:1439433/1‑150 (MQ=255)
                                                                    aaaaaGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAg                                                                                  >  1:1444704/1‑150 (MQ=255)
                                                                      aaaGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAGCGCATTCGTGTTGACCAGCGGGCATCCTTTCTCCCTCCCCGACCAGAATCACTTCAACCCCAGcc                                                                                >  2:953268/1‑150 (MQ=255)
                                                                            taCATCCTCCTTACGAATGTGAATCCCTCACCAGAGAAAAAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGTACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGc                                                                          <  1:1768108/149‑1 (MQ=255)
                                                                            gACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGc                                                                          <  2:412573/150‑1 (MQ=255)
                                                                                 cctcctGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTcc                                                                     <  1:1557150/150‑1 (MQ=255)
                                                                                  ctcctGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGCACGCATTCGTGTTGCCCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCCGCCGTTCGCAGTccg                                                                    >  1:371744/1‑149 (MQ=255)
                                                                                     ctGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCAATCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTcc                                                                 >  2:1476/1‑150 (MQ=255)
                                                                                         cGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATTGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGc                                                             <  1:1816086/150‑1 (MQ=255)
                                                                                         cGACTGGGAAACCCTCACCAGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGc                                                             <  1:149959/150‑1 (MQ=255)
                                                                                          gACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCt                                                            <  2:654400/150‑1 (MQ=255)
                                                                                             tGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATc                                                         <  1:1858126/150‑1 (MQ=255)
                                                                                              gggAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATcc                                                        >  1:125142/1‑150 (MQ=255)
                                                                                                  aaCCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAg                                                    >  1:1304735/1‑150 (MQ=255)
                                                                                                  aaCCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCGTCCAGGCTATCCGctg                                                    >  2:1242056/1‑148 (MQ=255)
                                                                                                   aCCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAgg                                                   <  2:28062/150‑1 (MQ=255)
                                                                                                    cccTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGAcc                                                                                                     <  1:1826555/99‑1 (MQ=255)
                                                                                                    cccTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGAcc                                                                                                     >  2:1826555/1‑99 (MQ=255)
                                                                                                    cccTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGa                                                  >  1:381527/1‑150 (MQ=255)
                                                                                                    cccTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGa                                                  >  2:1311378/1‑150 (MQ=255)
                                                                                                      cTCACCCGAGAAACAGAAGAAAGCCATTGTTGGTGTTCACAATGCCCGACGTACGCATTCGTGTAGACGAGCGGGCATACTATCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAAt                                                <  1:1204564/150‑1 (MQ=255)
                                                                                                          cccGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCt                                            <  2:227643/150‑1 (MQ=255)
                                                                                                          cccGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCt                                            <  2:381527/150‑1 (MQ=255)
                                                                                                            cGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTtc                                          <  1:48667/150‑1 (MQ=255)
                                                                                                            cGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTtc                                          >  1:1671743/1‑150 (MQ=255)
                                                                                                               gaAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCATTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTtcatc                                       <  1:201501/150‑1 (MQ=255)
                                                                                                                 aaCAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATcaa                                     >  1:1618717/1‑150 (MQ=255)
                                                                                                                 aaCAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATcaa                                     >  2:376407/1‑150 (MQ=255)
                                                                                                                     gcataaaCCCATTGATGGTGGTCACAATGCCCGCAGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCTACCCCAGCCTATCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAAt                                 <  2:802689/146‑1 (MQ=255)
                                                                                                                     gaagaaACCCATTGATGGTGTTCACAATCCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCAAAGCGCAGGAATGCCTTCATCAACAAt                                 >  1:946269/1‑150 (MQ=255)
                                                                                                                       agaaACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGa                               >  1:1239017/1‑150 (MQ=255)
                                                                                                                        gaaACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGAt                              <  2:1099622/150‑1 (MQ=255)
                                                                                                                        gaaACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGAt                              <  2:1095913/150‑1 (MQ=255)
                                                                                                                         aaaCCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATc                             <  2:1266131/150‑1 (MQ=255)
                                                                                                                          aaCCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCa                            >  2:346707/1‑150 (MQ=255)
                                                                                                                          aaCCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGAACAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAAAGCCTTCATCAACAATGATCa                            >  1:1140933/1‑150 (MQ=255)
                                                                                                                           aCCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACATCGGTCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATg                          <  2:242773/150‑1 (MQ=255)
                                                                                                                            cccATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGTCCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCATCAATGATCATg                          <  2:775858/150‑1 (MQ=255)
                                                                                                                            cccATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATg                          >  2:888308/1‑150 (MQ=255)
                                                                                                                              cATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCCCTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTc                        >  1:100399/1‑150 (MQ=255)
                                                                                                                               attgattgTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACATTGATCATGTCg                       <  1:975894/150‑1 (MQ=255)
                                                                                                                                    tGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGATACg                  <  1:788211/150‑1 (MQ=255)
                                                                                                                                      gtgtTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGATACGtt                >  2:1775032/1‑150 (MQ=255)
                                                                                                                                         ttCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGATACGTTGAg             <  1:464698/150‑1 (MQ=255)
                                                                                                                                          tCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGATACGTTGAGt            <  1:694992/150‑1 (MQ=255)
                                                                                                                                          tCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGATACGTTGAGt            <  1:935639/150‑1 (MQ=255)
                                                                                                                                             aaaTGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTATCACTCCCCGACCAGAATCTCTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGATACGTTGAGTATc         <  2:797659/149‑1 (MQ=255)
                                                                                                                                                     cGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGATACGTTGAGTATCAATGATc  >  2:317871‑M1/2‑150 (MQ=255)
                                                                                                                                                      |                                                                                                                                                    
AACGATGAAAACACTCTGCGCACCTACGGTAAAAAAACAGATGCCTATACCGTATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGATACGTTGAGTATCAATGATC  >  NC_000913/3277670‑3277967

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.