New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 526459 = | NA (NA) | 4 (0.040) | 3/268 | NT | 100% | coding (3199/4281 nt) | rhsD | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
? | NC_000913 | 526482 = | 0 (0.000) | coding (3222/4281 nt) | rhsD | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
GGTGGATGTCGCTGTCGCGTAAACCGGAGGTGACGTGGTATGGCTGGGACGGAGACAGGCTGACGACGGTGCAGACTGACACCACACGTATCCAGACGGTATACGAGCCGGGAAGCTTCACGCCGCTCATCCGGGTCGAGACAGAGAACGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACGCTCCAGCAGGAAGGGAGTGAGAACGGCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAG > NC_000913/526334‑526631 | cttcctccagcctgtccagcagccgcaccagttcagccgggaacaccacgccgtggccgttctcactcccttcctgctggagcgtctctgccaggctgcgccgctgcgctttttcccgctcgccgttctctgtctcgacccggatgagcg > 1:1998731‑M2/149‑150 (MQ=255) cttcctccagcctgtccagcagccgcaccagttcagccgggaacaccacgccgtggccgttctcactcccttcctgctggagcgtctctgccaggctgcgccgctgcgctttttcccgctcgccgttctctgtctcgacccggatgagcg > 2:225796‑M2/149‑150 (MQ=255) ttcctccagcctgtccagcagccgcaccagttcagccgggaacaccacgccgtggccgttctcactcccttcctgctggagcgtctctgccaggctgcgccgctgcgctttttcccgctcgccgttctctgtctcgacccggatgagcgg > 2:1978840‑M2/148‑150 (MQ=255) ttcctccagcctgtccagcagccgcaccagttcagccgggaacaccacgccgtggccgttctcactcccttcctgctggagcgtctctgccaggctgcgccgctgcgctttttcccgctcgccgttctctgtctcgacccggatgagcgc > 1:737045‑M2/148‑149 (MQ=255) cctccagcctgtccagcagccgcaccagttcagccgggaacaccacgccgtggccgttctcactcccttcctgctggagcgtctctgccaggctgcgccgctgcgctttttcccgctcgccgttctctgtctcgacccggatgagcggcg > 2:1664960‑M2/146‑150 (MQ=255) cctccagcctgtccagcagccgcaccagttcagccgggaacaccacgccgtggccgttctcactcccttcctgctggagcgtctctgccaggctgcgccgctgcgctttttcccgctcgccgttctctgtctcgacccggatgagcggcg < 2:930531‑M2/5‑1 (MQ=255) ctccagcctgtccagcagccgcaccagttcagccgggaacaccacgccgtggccgttctcactcccttcctgctggagcgtctctgccaggctgcgccgctgcgctttttcccgctcgccgttctctgtctcgacccggatgcgcggcgg > 1:918735‑M2/145‑149 (MQ=255) tccagcctgtccagcagccgcaccagttcagccgggaacaccacgccgtggccgttctcactcccttcctgctggagcgtctctgccaggctgcgccgctgcgcgttttcccgctcgccggtctctgtctcgccccggatgagcggcggg > 1:1694754‑M2/144‑148 (MQ=255) cccgctcgccgttctctgtctcgacccggatgagCGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACGCTCCAGCAGGAAGGGAGTGAGAACGGCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGc > 2:614721‑M2/35‑150 (MQ=255) gctcgccgttctctgtctcgacccggatgagCGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACCCTCCAGCAGGAAGGGAGTGAGAACGGCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTgg > 2:1636165‑M2/32‑150 (MQ=255) cccgctcgccgttctctgtctcgacccggat‑‑‑‑GAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACGCTCCAGCAGGAAGGGAGTGAGAACGGCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTggagga > 1:1039112‑M2/32‑150 (MQ=255) cgccgttctctgtctcgacccggatgagCGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACGCTCCAGCAGGAAGGGAGTGAGAACGGCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTggagg > 2:990571‑M2/29‑150 (MQ=255) agacacCGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCGGGCAGAGACGCTCCAGCAGGAAGGGAGTGAGAACGGCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGt < 1:1606115‑M2/144‑1 (MQ=255) CGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACGCTCCAGCAGGAAGGGAGTGAGAACGGCCACGTCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAg < 1:1940970‑M2/150‑1 (MQ=255) | GGTGGATGTCGCTGTCGCGTAAACCGGAGGTGACGTGGTATGGCTGGGACGGAGACAGGCTGACGACGGTGCAGACTGACACCACACGTATCCAGACGGTATACGAGCCGGGAAGCTTCACGCCGCTCATCCGGGTCGAGACAGAGAACGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACGCTCCAGCAGGAAGGGAGTGAGAACGGCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAG > NC_000913/526334‑526631 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |