New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3620350NA (NA)4 (0.040) 3/266 NT 100% coding (1159/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
?NC_000913 = 3620425 0 (0.000)coding (1234/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

ACAGCGACGGGCGGGTGACAGAACAGCTAAACCCGGCAGGCTTAAGCTACACGTATCAGTATGAGAAAGACCGCATCACCATCACCGACAGCCTGGACCGCCGTGAAGTGCTGCACACGCAGGGCGAAGCCGGGCTGAAGCGGGTGGTGAAAAAGGAACACGCGGACGGCAGCGTCACGCAGAGTCAGTTTGACGCCGTGGGCAGGCTCAGGGCACAGACGGATGCCGCAGGCAGGACAACAGAGTACAGCCCGGATGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGG  >  NC_000913/3620276‑3620573
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aCAGCGACGGGCGGGTGACAGAACAGCTAAACCCGGCAGGCTTAAGCTACACGTATCAGTATGAGAAAGACCGCATCACCATCACCGACAGCCTGGACCGCCGTGAAGTGCTGCACACGCAGGGCGAAGCCGGGCTGAAGCGGGTGGTGA                                                                                                                                                      >  2:34386‑M2/1‑150 (MQ=255)
                                                                    gACCGCATCACCATCACCGACAGCCTGGACCGCCGTGAAGTGCTGCACACGCAGGGCGAAGCCGGGCTGAAGCGGGTGGTGAtgcggtctttctcatactgatacgtgtagcttaagcctgccgggtttagctgttctgtcacccgcccg                                                                                  <  1:891789‑M2/150‑69 (MQ=255)
                                                                     aCCGCATCACCATCACCGACAGCCTGGACCGCCGTGAAGTGCTGCACACGCAGGGCGAAGCCGGGCTGAAGCGGGTGGTGAtgcggtctttctcatactgatacgagtagcttaagcctgccgggtttagctgttctgtcacccgcccgt                                                                                 <  2:1270035‑M2/150‑70 (MQ=255)
                                                                                    ccGACAGCCTGGACCGCCGTGAAGTGCTGCACACGCAGGGCGAAGCCGGGCTGTCGGTGATGGTGAtgcggtctttctcatactgatacgtgtagcttaagcctgccgggtttagctgttctgtcacccgcccgtcgctgtcgtaacggt                                                                  <  2:1191116‑M2/150‑85 (MQ=255)
                                                                                    ccGACAGCCTGGACCGCCGTGAAGTGCTGCACACGCAGGGCGAAGCCGGGCTGTCGGTGATGGTGAtgcggtctttctcatactgatacgtgtagcttaagcctgccgggtttagctgttctgtcacccgccagtcgctgtcgtaccggt                                                                  <  2:1198306‑M2/150‑85 (MQ=255)
                                                                                                                                                tggtgAtgcggtctttctcatactgatacgtgtagcttaagcctgccgggtttagctgttctgtcacccgcccgtcgctgtcgtaacggtaacggatttccggccggcccgtgtgacggtgcgccaccatccggccccggtatttatcat      >  1:1864530‑M2/1‑6 (MQ=255)
                                                                                                                                                tggtgAtgcggtctttctcatactgatacgtgtagcttaagcctgccgggtttagctgttctgtcacccgcccgtcgctgtcgtaacggtaacggatttccggccggcccgtgtgacggtgcgccaccatccggccccggtatttatcat      >  1:582935‑M2/1‑6 (MQ=255)
                                                                                                                                                tggtgAtgcggtctttctcatactgatacgtgtagcttaagcctgccgggtttagctgttctgtcacccgcccgtcgctgtcgtaacggtaacggatttccggccggcccgtgtgacggtgcgccaccatccggccccggtatttatcat      <  1:974940‑M2/150‑145 (MQ=255)
                                                                                                                                                tggtgAtgcggtctttctcatactgatacgtgtagcttaagcctgccgggtttagctgttctgtcacccgcccggcgctgtcgtaacggtaacggatttccggccggcccgtgtgacggtgcgccaccatccggcaccggtatttaacat      <  2:1100431‑M2/150‑145 (MQ=255)
                                                                                                                                                tggggAtgcggtctttctcatactgatacgtgtagcttaagcctgccggggttagctgtgctggcacccgcccgtcgctgtcgtatcggtaacggatttccggccggcccgtgtgacggtgcgccaccatccggccccggtatttatcat      >  1:314193‑M2/1‑6 (MQ=255)
                                                                                                                                                 ggtgAtgcggtctttctcatactgatacgtgtagcttaagcctgccgggtttagctgttctgtcacccgcccgtcgctgtcgtaacggtaacggatttccggccggcccgtgtgacggtgcgccaccatccggccccggtatttatcatc     >  1:1670860‑M2/1‑5 (MQ=255)
                                                                                                                                                 ggtgAtgcggtctttctcatactgatacgtgtagcttaagcctgccgggtttagctgttctgtcacccgcccgtcgctgtcgtaacggtaacggatttccggccggcccgtgtgacggtgcgccaccatccggccccggtatttatcatc     <  2:557000‑M2/150‑146 (MQ=255)
                                                                                                                                                 ggtgAtgcggtctttctcatactgatacgtgtagcttaagcctgccgggtttagctgttctgtcacccgcccgtcgctgtcgtaacggtaacggatttccggccggcccgtgtgacggtgcgccaccatccggccccggtatttatcatc     <  2:1391637‑M2/150‑146 (MQ=255)
                                                                                                                                                 ggtgAtgcggtctttctcatactgatacgtgtagcttaagcctgccgggtttagctgttctgtcacccgcccgtcgctgtcgtaacggtaacggatttccggccggcccgtgtgacggtgcgccaccatccggccccggtatttatcatc     >  1:1678254‑M2/1‑5 (MQ=255)
                                                                                                                                                  gtgAtgcggtctttctcatactgatacgtgtagcttaagcctgccgggtttagctgttctgtcacccgcccgtcgctgtcgtaacggtaacggatttccggccggcccgtgtgacggtgcgcccccatccggccccggtatttatcatcg    <  1:497462‑M2/150‑147 (MQ=255)
                                                                                                                                                  gtgAtgcggtctttctcatactgatacgtgtagcttaagcctgccgggtttagctgttctgtcacccgcccgtcgctgtcgtaacggtaacggatttccggccggcccgtgtgacggtgcgccaccatccggccccggtatttatcatcg    >  1:682278‑M2/1‑4 (MQ=255)
                                                                                                                                                  gtgAtgcggtctttctcatactgatacgtgtagcttaagcctgccgggtttagctgttctgtcacccgcccgtcgctgtcgtaacggtaacggatttccggccggcccgtgtgacggtgcgccaccatccggccccggtatttatcatcg    >  1:647085‑M2/1‑4 (MQ=255)
                                                                                                                                                  gtgAtgcggtctttcccatactgatacgtgtagcttaagcctgccgggtttagctgttctgtcacccgcccgtcgctgtcgtaacggtaacggatttccggccggcccgtgtgacggtgcgccaccatccggccccggtatttatcatcg    <  1:565671‑M2/150‑147 (MQ=255)
                                                                                                                                                  gtgAtgcggtcttgctcatactgatacgtgtagcttaagcctgccgggtttagctgttctgtcacccgcccgtcgctgtcgtaacggtaacggatttccggccggcccgtgtgacggtgcgccaccatccggccccggtatttatcatcg    >  2:495863‑M2/1‑4 (MQ=255)
                                                                                                                                                   tgAtgcggtctttctcatactgatacgtgtagcttaagcctgccgggtttagctgttctgtcacccgcccgtcgctgtcgtaacggtaacggatttccggccggcccgtgtgacggtgcgccaccatccggccccggtatttatcatcgt   <  1:1135632‑M2/150‑148 (MQ=255)
                                                                                                                                                    gAtgcggtctttctcatactgatacgtgtagcttaagcctgccgggtttagctgttctgtcacccgcccgtcgctgtcgtaacggtaacggatttccggccggcccgtgtgacggtgcgccaccatccggccccggtatttatcatcgta  >  2:710359‑M2/1‑2 (MQ=255)
                                                                                                                                                    gAtgcggtctttctcatactgatacgtgtagcttaagcctgccgggtttagctgttctgtcacccgcccgtcgctgtcggaacggtacggatttccggccggcccgggtgacggtgcgccaccagccggccccgggatttatcatcttaa  <  2:1980032‑M2/150‑149 (MQ=255)
                                                                                                                                                    gAtgcggtctttctcatactgatacgggtagcttaagcctgccgggtttagctgttctgtcacccgcccggcgctgtcgtaacggtaacggatttccggccggcccgtgtgacggtgcgccaccatccggccccggtatttatcatcgta  >  1:446345‑M2/1‑2 (MQ=255)
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ACAGCGACGGGCGGGTGACAGAACAGCTAAACCCGGCAGGCTTAAGCTACACGTATCAGTATGAGAAAGACCGCATCACCATCACCGACAGCCTGGACCGCCGTGAAGTGCTGCACACGCAGGGCGAAGCCGGGCTGAAGCGGGTGGTGAAAAAGGAACACGCGGACGGCAGCGTCACGCAGAGTCAGTTTGACGCCGTGGGCAGGCTCAGGGCACAGACGGATGCCGCAGGCAGGACAACAGAGTACAGCCCGGATGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGG  >  NC_000913/3620276‑3620573

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.