New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3621534NA (NA)5 (0.050) 4/262 NT 100% coding (2343/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
?NC_000913 = 3621592 0 (0.000)coding (2401/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

CCGGTGAGCGTCAGACGGTGCATCACCCGCAGACGGAAGCACTGCTCTGGCAGCATGAGACCAGACATGCGTACAACGCGCAGGGGCTGGCGAACCGCTGTATACCGGACAGCCTGCCCGCCGTGGAATGGCTGACCTACGGCAGCGGTTACCTGGCAGGCATGAAACTCGGCGACACACCGCTGGTGGAGTACACCCGCGACCGCCTGCACCGGGAAACGCTGCGCAGCTTCGGCCGTTATGAACTCACCACCGCTTATACCCCTGCCGGGCAGTTACAGAGCCAGCACCTGAACAG  >  NC_000913/3621443‑3621740
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ccGGTGAGCGTCAGAAGGTGCATCACCCGCAGACGGAAGCACTGCTCTGGCAGCATGAGACCAGACATGCGTACAACGCGCAGTGGCTGGCGAACCGCTGTATACCGGACAGCCTGCCCGCCGTGGAATGGCTGACCTACGGCAGCGGTT                                                                                                                                                      <  2:1336075‑M2/150‑1 (MQ=255)
                                                                                      cTGGCGAACCGCTGTATACCGGACAGCCTGCCCGCCGTGGAATGGCTGACCTACGGCAGCGGTTcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgct                                                                <  1:835321‑M2/150‑87 (MQ=255)
                                                                                          cGAACCGCTGTATACCGGACAGCCTGCCCGCCGTGGAATGGCTGACCTACGGCAGCGGTTcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcacc                                                            <  2:1018675‑M2/150‑91 (MQ=255)
                                                                                          cGAACCGCTGTATACCGGACAGCCTGCCCGCCGTGGAATGGCTGACCTACGGCAGCGGTTcgccagcccctgcgcgttgtacgcatgtatggtctcatgctgccataacagtgattccttctgcgggtgatacacagtctgacgctcacc                                                            <  2:1293001‑M2/150‑91 (MQ=255)
                                                                                           gAACCGCTGTATACCGGACAGCCTGCCCGCCGTGGAATGGCTGACCTACGGCAGCGGTTcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccg                                                           <  2:1209510‑M2/150‑92 (MQ=255)
                                                                                                gCTGTATACCGGACAGCCTGCCCGCCGTGGAATGGCTGACCGGTATACAGCGGTTcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctccccggtca                                                       <  2:1238853‑M2/150‑96 (MQ=255)
                                                                                                                                            atcccgcggggcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccacccggtgc           >  2:255701‑M2/6‑11 (MQ=255)
                                                                                                                                               cAGCGGTTcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgtgtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccacccggtgccct        <  2:1781265‑M2/150‑143 (MQ=255)
                                                                                                                                               cAGCGGTTcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccacccggtgccct        <  1:315543‑M2/150‑143 (MQ=255)
                                                                                                                                               cAGCGGTTcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccacccggtgccct        <  2:1444197‑M2/150‑143 (MQ=255)
                                                                                                                                               cAGCGGTTcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccacccggtgcccg        <  1:335541‑M2/150‑143 (MQ=255)
                                                                                                                                                aGCGGTTcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccacccggtgccctt       >  2:774392‑M2/1‑7 (MQ=255)
                                                                                                                                                 gCGGTTcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccccccggtgcccttc      <  2:141237‑M2/150‑145 (MQ=255)
                                                                                                                                                 gCGGTTcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccacccggtgcccttc      <  2:959112‑M2/150‑145 (MQ=255)
                                                                                                                                                 gCGGTTcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttcagtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctatctcatcatacctgtaatgcaccgccaaccgctgcccttc      <  2:1424129‑M2/150‑145 (MQ=255)
                                                                                                                                                 gCGGATcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccacccggtgcccttc      <  1:1053553‑M2/150‑145 (MQ=255)
                                                                                                                                                 ccgGGTcgccagcccctgcgcggtgtacgcatgtctgggctcatgctgccagagcagtgcggccgtctgcgggtgaggcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccacccggtgcccttc      >  2:320046‑M2/2‑6 (MQ=255)
                                                                                                                                                   ggTTcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccacccggtgcccttcgc    <  2:32990‑M2/150‑147 (MQ=255)
                                                                                                                                                    gTTcgcgagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccacccggtgcccttcgct   <  2:300326‑M2/150‑148 (MQ=255)
                                                                                                                                                    gTTcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccacccggtgcccttcgct   >  2:1992816‑M2/1‑3 (MQ=255)
                                                                                                                                                    gTTcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccacccggtgcccttcgct   >  1:365654‑M2/1‑3 (MQ=255)
                                                                                                                                                    gTTcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccacccggtgcccttcgct   >  2:462238‑M2/1‑3 (MQ=255)
                                                                                                                                                     ttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccacccggtgcccttcgctg  >  2:999967‑M2/1‑2 (MQ=255)
                                                                                                                                                     ttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccacccggtgcccttcgctg  >  1:1347297‑M2/1‑2 (MQ=255)
                                                                                                                                                     ttcgccagcccctgcgcgttgtacgcatggctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccacccggtgcccttcgctg  >  2:1384597‑M2/1‑2 (MQ=255)
                                                                                                                                                      |                                                                                                                                                    
CCGGTGAGCGTCAGACGGTGCATCACCCGCAGACGGAAGCACTGCTCTGGCAGCATGAGACCAGACATGCGTACAACGCGCAGGGGCTGGCGAACCGCTGTATACCGGACAGCCTGCCCGCCGTGGAATGGCTGACCTACGGCAGCGGTTACCTGGCAGGCATGAAACTCGGCGACACACCGCTGGTGGAGTACACCCGCGACCGCCTGCACCGGGAAACGCTGCGCAGCTTCGGCCGTTATGAACTCACCACCGCTTATACCCCTGCCGGGCAGTTACAGAGCCAGCACCTGAACAG  >  NC_000913/3621443‑3621740

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.